Anser cygnoides (swan goose): 106035456
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Entry
106035456 CDS
T04896
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X2
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acyg04121
]
106035456 (PDZRN3)
Enzymes [BR:
acyg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106035456 (PDZRN3)
Ubiquitin system [BR:
acyg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106035456 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
106035456
NCBI-ProteinID:
XP_013035725
UniProt:
A0A8B9EJG5
LinkDB
All DBs
Position
10:6071550..6205116
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AA seq
779 aa
AA seq
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MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRSPRAK
IFTPHESQLVDVGTQTDITFEHIMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDY
MGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDIGIYVSEIDPNSIAAKDG
RLREGDRIIQINGIEVQNREEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRNDFLDD
LHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDE
SSEQENNADDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDE
CERFRELLELKCQVKSASPYSLYYHNSTLDMSKSDQESVDKELEMLNEELRNIELECLNI
VRAHKMQQLKDQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGE
SCRSTPLTLEISPDNSLRRTAEGVNCQGNEGAVAYNVSQKNLLAGSESHESSTGKCHSSA
KDPDLGKQLESKERKASDGSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQL
IQQKSAVEYAQSQMSLVSMCKDFNASQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERA
IKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQ
GAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctgcagaagcaagaagaacagtacaaattactgtatgaa
gtttgtcaggtcaatgggaaggatttatctaaggcaacacatgagcaggcagtggaagcg
ttcaaaaccgccaaggagcccattgtggtgcaggtcctgaggagatccccacgcgccaag
atcttcactcctcatgagtcccagctggtagatgtgggcacacagacggatatcactttt
gaacacatcatggctctaagcaagatgggctcacctacaccacctgtctctgtgctggac
ccgtacctcctacctgaagaccatccatcagtgcatgagtactatgatccaaatgactac
atgggaggaattcatcaagaaatggaccgagatgagttagaactggaggaagtagatttg
catagagtgaacagccaggacaagcttggccttactgtatgttaccgaacggacgatgag
gatgatattggtatttatgtgagcgagattgatcccaacagtattgctgcaaaagacggt
cggctccgagaaggggatcgcattattcaaatcaatggcatagaggtacagaaccgagaa
gaagctgtggcacttctcaccagtgaagagagcaagaatatctccttgcttgttgcaaga
ccagaaattcagctggatgaaggatggatggatgatgacagaaatgattttctggatgac
ttgcacatggacatgttagaggagcagcaccaccaggcaatgcaatttactgccagcatg
ctccagcagaagaagcatgaggaagatggcggtaccacagacacagccaccattttatct
aaccagcacgagaaggacagtggtgtggggcgcacagacgacagcactcggaatgatgag
agctctgagcaggaaaacaatgccgatgatcacaccacttcctccaacactttagggagc
cagaagaagctgacttacagtcatgacaccctcggaagcggcgatatgcagttcagcaac
gagtcgttcatctcagctgactgcacagacgtcgacttccttggcatccccgtagatgaa
tgtgagcgattccgggaactgctggagctgaagtgccaggtgaagtctgccagcccttac
agcctgtactatcataacagcactctggatatgagcaaaagcgaccaagaaagcgttgac
aaagagctggagatgctgaatgaggagctgcgcaatatcgagctggagtgcctgaatatt
gtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccctggatgctgcac
aacagcgggttccgcaactataacaccagcatcgatgttcgcaggcacgagctctcagac
attacagagctccctgagaagtctgacaaggatagctcgagtgcatacaacacaggggaa
agctgccgaagcacaccactcacgctggagatttctcctgacaattcactgcgcagaact
gcagaaggcgtcaactgtcaaggtaacgagggggcagtggcgtacaacgtctcccaaaag
aatttattggctggctcagaaagccatgaatccagcactggtaaatgccattcctctgct
aaagatcccgaccttggcaagcagctggaaagcaaggagagaaaagccagtgatggaagc
aaaagccctacgcatggtcaaaaaccttctggctcctacgtctccccgtaccatcactct
ccatataagcatgctcatattcctgcccacgcgcagcactaccagagctacatgcagctg
atccaacagaaatcagcggtggagtacgcacagagccaaatgagcctggtgagtatgtgt
aaagactttaacgcgagccagagcgaaccgaggatggagtggaaagtcaaagtgcgaagc
gatgggacgcggtacatcacaaagaggccagtcagggacaggctgctgagagaacgtgcc
attaagatcaaggaagagcgcagcggaatgactaccgatgacgatgccataagtgaaatg
aagatgggccggtactggagtaaggaagagcggaagcagcatttagtgaaggcgaaggag
cagaggaggaggcgtgagttcatgatgcagagcaggctagattgtttaaaggaacagcaa
ggtgcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatgatgaag
aagagaaataaaaaaatatttgacaactggatgacaatccaggaactccttacccatgga
acaaagtcaccagacggcacacgagtgtacaattccttcctgtcagtgactactgtataa
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