KEGG   Anser cygnoides (swan goose): 106035650
Entry
106035650         CDS       T04896                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
acyg  Anser cygnoides (swan goose)
Pathway
acyg03420  Nucleotide excision repair
acyg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106035650 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106035650 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acyg04121]
    106035650 (ERCC8)
   03400 DNA repair and recombination proteins [BR:acyg03400]
    106035650 (ERCC8)
Ubiquitin system [BR:acyg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106035650 (ERCC8)
DNA repair and recombination proteins [BR:acyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106035650 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML WD_LRWD1 Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_WDR11_1st Beta-prop_HPS5 Beta-prop_DCAF4 Cytochrom_D1
Other DBs
NCBI-GeneID: 106035650
NCBI-ProteinID: XP_013036036
LinkDB
Position
Z:complement(74541507..74576111)
AA seq 399 aa
MLGFLSGRQAGLDDPLRLRRAEATRRVLSLELNKDRDVERIHGNGINSLDIEPVEGRYML
SGGSDGVIVLYDLENLSRKPSYTCKALCSVGRSHPDGHRFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFHFEGTVYSHHMSSVATKHCLVAVGTKSPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRHEYILATASADSKVKLWDVRRASGCLTTLDQHNGEKTKASSEA
ANTAHNGRVNGLCYTSDGLHLLTIGTDDRMRLWNSSTGENTLVNYGKVRNESRKGLKFAI
SCGCNPEFAFVPCGSTIAVYTVFSGELITMLRGHYNTVDCCVFQPNFQELYSGGKDCNIL
AWIPALREPVPDDVSDKCLPQQHLNPAYEDAWSSTDDEG
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgttggggttcctgtcgggccgccaggccgggctcgacgacccactgcggctgcgccgc
gccgaggccacccggagggttctcagtttggaattaaataaagatagagatgtggaaaga
atacatgggaatggtattaacagccttgatattgagcctgttgagggaagatacatgtta
tcaggtggttccgatggtgttattgtactttatgaccttgaaaacctgagcagaaaacca
agttacacatgtaaagcactttgttccgtgggaaggagccatcctgatggacatagattc
agtgtggagacagtccagtggtatcctcatgatactggcatgtttacatccagctcattt
gataaaaccttgaaaatttgggatactaatactttacaacctgcagatgtatttcacttt
gaaggaacagtctatagccatcacatgtcttcagttgctacaaagcactgtttagtagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatcctgttctcac
attctgcagggtcacagacaagaaatactggcagtgtcttggtctccacgtcatgaatat
attttggcaacagcaagtgctgacagtaaagtaaaattatgggatgtgaggagagcatct
ggatgtctaactacgcttgatcagcacaatggagaaaagaccaaagcatcttctgaggca
gcaaatacggctcacaatgggagagttaatggtttatgctatacaagtgatgggcttcat
ctgttgaccattggtacggatgatcgcatgagactctggaacagctccactggagaaaat
acattagtgaactatggtaaagtccgcaatgaaagtagaaaaggactcaaatttgccatc
tcttgtggctgcaatccagagtttgcctttgtgccatgtggtagtaccattgctgtttat
acagttttctcaggagaactgataactatgcttagaggacattataatactgttgactgc
tgtgtatttcaacctaactttcaggaactttatagtggtggcaaagattgcaatatcctc
gcatggataccagctcttcgagagccagttcctgatgatgtttctgacaagtgtctgcct
cagcagcatttaaatccagcgtatgaagatgcatggagcagcactgatgatgaaggctga

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