Anser cygnoides (swan goose): 106036183
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Entry
106036183 CDS
T04896
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04382
Cornified envelope formation
acyg04510
Focal adhesion
acyg04512
ECM-receptor interaction
acyg04518
Integrin signaling
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106036183 (COL4A3)
04518 Integrin signaling
106036183 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106036183 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106036183 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106036183 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acyg04147
]
106036183 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
acyg00536
]
106036183 (COL4A3)
Exosome [BR:
acyg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106036183 (COL4A3)
Glycosaminoglycan binding proteins [BR:
acyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106036183 (COL4A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106036183
NCBI-ProteinID:
XP_047919012
LinkDB
All DBs
Position
9
Genome browser
AA seq
1680 aa
AA seq
DB search
MAAGGCPGRLLPLLPLLLLVLLVLLALLRPGRAAAAESCVCKGKSPCFCDGTKGNKGEKG
FPGVPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGAPGIPGFSGPPGLPGEPG
AAGPPGRSGVPGCNGTKGNQGFPGPPGRRGAPGIPGVTGIKGEKGCPADGYNQGYDAKGD
PGLPGMPGLQGAQGVQGYPGENGPQGPPGTSGMPGRPGPPGPKGLMGIKVIGTKGRKGDT
GLTGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPVGDSQSEKGDQGEP
GPQGKPGKEGAPGPPGLPGQKGEQGKPGVAGRQGAKGIKGNTGPPGACGRTEYYDNVVGD
KGDEGPPGPPGPKGQRGMPGPQGPPGGAGRPGVSRPGLRGPPGFPGPKGTKGEKGQTGLC
IVGPPGLPGITGRPGSVGLPGPPGEPGRVIFRTGPPGRPGEPGCAGPPGPPGDVGMKGDE
AYVCTDCSYVPGTPGLPGSPGPRGQDGIPGREGTQGPKGAPGSPGAPGFPGAQGHPGFKG
DQGHKGSKGEPGYVYPEGPKGEQGDPGPRGDKGRKGSSGFLGRPGPKGYKGFKGEEGLSG
TKGDRGLPGLPGNPGLPGEMGLPGPPGYGPQGIRGFKGSKGVPGPPGLPGEAGLKGETSR
ITPLPALPGPQGPYGLPGPPGVPGRVGTNGQPGDPGHPGPTGDTGFPGLGFPGNPGPKGD
KGLTGGRGLPGCEGKIGEPGQAGNLGQPGEKGDPGMIIHGEPGRLGSPGGRGIPGPKGDT
GFPGLPGLPGRAGHDGDDGLRGDPGSPGIPGDPGFPGKPAECLTGRPGLPGGQGATGPPG
GRGSLGSKGKLGPPGLGIPGIYGKPGEPGLIGLQGNTGLPGLKGQSGRPGIDGVPGPRGE
PGIMGPLGIPGPPGMIGSPGNLGVRGSFGFPGLKGRKGFLGAKGEPGDKGFPGPSETLVG
IGNKGEQGPKGVQGRMGLRGEKGDAGVQGPPGLVGSEGVPGIPGAKGFMGLPGIPGGQGF
PGAPGNKGNMGIPGSKGQKGSPGFPGPSGDPGPTGYGGFPGEKGDPGHPSPGPPGEPGPK
GDSGAPGLLGSKGEKGSQGQPGHKGVPGPHGIRGETGVAGIPGKPGPPGGVGVKGQQGHP
GQQGIIGPPGAVGYPGENGLGGERGSQGRDGMPGPPGVKGEPGAPGRGIPGLRGVPGRRG
IKGDMGLPGFPGPPGVKGRQGDQGPIGPPGLMGLPGFQGATGMAITGPKGNRGLAGADGR
PGAPGFQGLPGLPTPSMKGNKGVRGADGIPGPTGPTGNSGPPGPKGIEGRPGYPGARGDP
GFLGFPGVKGEKGNQGPPGPQGAEGPRGPKGQRGPPGVPGRIFSVPGSKGPPGLPGVPGT
PGDQGIQGIPGLQGPKGVKGLPGSFGRPGQPGLPGPKGDRGFPGERGQPGLIGFPGLQGL
PGSPGTIITGPTRRGFIFTRHSQTTKIPSCPPGTSQIYVGFSLLFVQGNERAHGQDLGTA
GSCLQRFTTMPFLFCNTNDVCSFASRNDYSYWLSTATAMPVDMAPISGRALEPHISRCIV
CEGPAMVIAVHSQTTVVPACPEGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRA
IPFIECHGRGTCNYYTNSYSFWLASLNPQRMFRKPLPQTLKAGELENIISRCQVCMKRPV
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgggggctgtcccggccgcctgctgccgcttctgcccctgctgctgctggta
ctgctggtactgctcgccctgctccggccgggccgcgccgcggcggctgagagctgtgta
tgcaaaggtaaaagtccttgcttttgtgacggcacaaaaggtaataagggtgaaaaaggt
ttccctggtgtcccaggtccacctggtcatagaggctttcccggtccagaagggcctcca
gggccacaggggccaaagggttcaccaggacttacgggcttagttggacccaaaggtata
cggggagccccaggaatacctggattttcaggtcccccaggtcttccaggtgaaccagga
gctgctggccctcctggacgctcgggtgttccaggatgcaacggcacaaagggcaatcaa
ggttttccaggtcctccaggtagaagaggtgctccaggcattccaggtgtcactggcatt
aaaggagagaaggggtgccctgcagatggatataaccaaggatatgatgcaaaaggtgat
cctgggttgccaggaatgcctggacttcagggtgcccagggtgttcaaggatatcctggg
gaaaacggaccacagggccctccaggaacttcaggaatgccagggagaccaggacctcct
ggacctaagggtcttatgggaataaaagtaataggaaccaaaggaagaaagggtgacact
ggattaactggaccccctggaccaccaggaaccgttattgtgacattaagtggaccagac
aacatgacggacttgaaaggagagaaaggggaaaaaggatcaagaggacttccaggacca
atggggtttacagggccagttggtgattctcaaagtgaaaagggtgaccaaggagaaccc
ggaccacagggtaaacctggaaaagaaggtgccccaggtccacctggcttaccgggacaa
aagggcgaacagggcaaaccaggagtggctggcagacaaggagctaaggggataaaaggc
aacactggtccacctggagcttgtggtcgaacagagtattatgataatgtagttggtgat
aagggagatgaaggaccccctggacctccaggaccaaaaggtcaacgtggtatgcctggg
ccacagggtcctcctggaggtgctggtagaccaggtgtgtcaagacctggtctgagaggt
cccccaggatttcctggcccaaaaggaacaaaaggagaaaaaggacaaacgggcttgtgc
attgtaggccctccaggactacctgggattactggcagacctggttctgttggattacca
ggtcctccaggagaaccaggtagagtaatatttagaacaggcccaccaggacgtcctgga
gagccagggtgtgcaggacctccaggacctccaggagatgttggcatgaaaggtgatgaa
gcttacgtgtgtactgattgtagctatgttccgggaacacctggtcttcctggttcgcct
gggccacgtggccaggatggcatccctggtagggaaggaacacaaggtcccaaaggagct
ccaggttctccaggagcaccaggttttccaggagctcaaggacatccaggttttaaagga
gatcaaggacataaaggatcaaaaggtgagccaggatacgtgtatccagaagggccaaaa
ggtgagcaaggagatccagggcccaggggagacaaaggaagaaaaggttcaagtggattt
ctgggaagacctggcccaaagggctacaagggttttaaaggtgaagagggattgtctggt
acaaaaggagatagaggactacctggactgcctggtaatcctggtctccctggagagatg
gggcttcctggaccaccaggatatggaccacaaggaataagaggtttcaaaggctctaaa
ggagtacctggtcctcctggattgcctggagaagctggtctgaaaggagagaccagtagg
ataactccgttgcctgcattgccaggacctcagggaccatatggtttacctggaccccca
ggggtgcctggtagggtcggaacaaatggtcagccaggtgatccaggacatccagggcca
acaggtgacacaggctttccagggcttgggtttcctggaaacccaggtccaaaaggagat
aagggacttactggaggcagaggattaccaggttgtgaaggaaaaattggagagccaggc
caagctggaaatctgggacaaccaggagaaaagggggacccaggcatgattattcatgga
gagccaggcagacttggttcaccaggaggtcgtggcattcctggtccaaaaggtgataca
ggatttccaggacttccaggcctaccaggacgtgctggacatgatggtgatgatggccta
agaggagatcctggctcacctggaattccaggggatccaggttttccagggaaacctgct
gagtgtcttactggccggccaggtttgccaggtggccagggagctacaggcccaccagga
ggaagaggttcattaggttcaaaaggaaaacttggtcctcctggcttgggtatcccaggg
atctatggaaaaccgggggaacctggcttaattggtcttcagggaaacacaggattacct
ggtctcaagggacagtctggaagaccaggaatcgatggtgtgccaggccctaggggagag
ccaggtataatggggccattaggaattcctgggcccccaggcatgattggaagtccaggc
aacctgggtgtcagaggttcttttggcttcccaggactaaaaggaagaaaggggtttctt
ggagcaaaaggtgaaccaggtgataaaggttttcctggaccatctgagaccttggttggc
attggaaataaaggagaacaaggcccaaaaggagtccaaggaaggatgggtctaagagga
gaaaaaggagatgcaggtgtacaaggtcccccaggtcttgttggatctgaaggagtacct
ggtataccaggtgccaaaggatttatgggtcttccagggattcctggagggcaaggattc
ccaggtgcaccaggaaacaaagggaacatgggaattccaggttcaaaagggcagaaagga
tctccaggctttccaggaccatcaggtgaccctggtccaacaggctatggtggctttcca
ggtgaaaaaggagaccctgggcacccatctcctgggcccccaggagaacctggtccaaag
ggagattcaggtgctcctggacttttgggcagcaaaggagaaaaagggtcccaaggtcag
ccaggacataaaggagtaccagggccacatgggatcagaggagaaacaggagttgcagga
atcccagggaaacctggacctcctggaggtgttggtgttaaaggacagcagggtcaccca
ggacaacagggcattataggccctcctggtgctgttggataccctggagaaaatggactt
ggtggtgaaagaggcagtcagggtcgggatggtatgcctggtcccccaggagtaaaggga
gaaccaggggcaccagggagaggtatccctggccttcgaggtgttcctggtcgtagagga
atcaaaggggacatggggctgcctggttttcctgggccaccaggtgtgaaaggtcgtcag
ggtgatcaaggacccattggacctcctggcttaatggggttacctggatttcaaggtgca
acaggcatggcaattactggcccaaaagggaatagaggccttgctggtgcagatggaaga
ccaggtgctcctggttttcaagggttgcctggtcttcccactcccagcatgaaaggaaac
aaaggtgttagaggggcagatggcataccagggccaacaggtccaactggcaacagtggt
cctccaggtccaaaaggaatagaaggtcgaccaggttatcctggtgctagaggggaccct
ggttttcttggatttccaggtgtaaaaggagaaaagggtaatcaaggaccccctggacca
caaggtgcagaagggccaaggggaccaaagggccaacgtggtccacctggagtccctggg
agaatattctctgtcccaggaagcaaggggcctcctggactgccgggagtcccaggaaca
ccaggagatcaaggaattcaagggattcctgggctacaaggacctaaaggagtaaaaggt
ctaccaggaagctttggtcgtccaggtcaaccaggactgcctggtccaaaaggagaccgg
ggatttccaggagaaagagggcaacctggactgattggctttcctggtctacaggggtta
cctggatcaccaggtactatcatcactggtccaacaagaagaggttttatctttacccgg
catagtcaaacgacaaagattccttcgtgtccgccagggacatcacagatctatgttggc
ttttcgctgctttttgttcaaggaaacgaacgagcgcatggacaagaccttggaacagct
ggtagctgcttgcagagatttaccaccatgccattcttattctgtaacaccaatgatgtt
tgtagctttgcttctcgcaacgactattcatactggctgtcaactgcaacagcaatgcca
gtagacatggcaccgatttctggcagagcactagagccccatataagcagatgcattgtc
tgtgaaggacctgcaatggtaatagcagttcacagccaaacaactgtcgttcctgcatgt
ccagaaggctggatatctctctggaagggtttttcttttgttatgtatacaagtgcaggc
tcagaagcttctggtcaagcgctggcatctcctggatcttgcttggaagaatttcgagcc
atcccattcatagagtgccatggcaggggcacgtgcaattactacacaaactcctacagt
ttctggttggcatcactaaatccacaaagaatgttcaggaaacctctgccacagacactg
aaagcaggagaactagaaaacatcatcagtcgttgtcaggtctgcatgaagagaccagtg
taa
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