Anser cygnoides (swan goose): 106036183
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Entry
106036183 CDS
T04896
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04510
Focal adhesion
acyg04512
ECM-receptor interaction
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106036183 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106036183 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106036183 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acyg04147
]
106036183 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
acyg00536
]
106036183 (COL4A3)
Exosome [BR:
acyg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106036183 (COL4A3)
Glycosaminoglycan binding proteins [BR:
acyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106036183 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106036183
NCBI-ProteinID:
XP_047919012
LinkDB
All DBs
Position
9:complement(3778016..3840382)
Genome browser
AA seq
1680 aa
AA seq
DB search
MAAGGCPGRLLPLLPLLLLVLLVLLALLRPGRAAAAESCVCKGKSPCFCDGTKGNKGEKG
FPGVPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGAPGIPGFSGPPGLPGEPG
AAGPPGRSGVPGCNGTKGNQGFPGPPGRRGAPGIPGVTGIKGEKGCPADGYNQGYDAKGD
PGLPGMPGLQGAQGVQGYPGENGPQGPPGTSGMPGRPGPPGPKGLMGIKVIGTKGRKGDT
GLTGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPVGDSQSEKGDQGEP
GPQGKPGKEGAPGPPGLPGQKGEQGKPGVAGRQGAKGIKGNTGPPGACGRTEYYDNVVGD
KGDEGPPGPPGPKGQRGMPGPQGPPGGAGRPGVSRPGLRGPPGFPGPKGTKGEKGQTGLC
IVGPPGLPGITGRPGSVGLPGPPGEPGRVIFRTGPPGRPGEPGCAGPPGPPGDVGMKGDE
AYVCTDCSYVPGTPGLPGSPGPRGQDGIPGREGTQGPKGAPGSPGAPGFPGAQGHPGFKG
DQGHKGSKGEPGYVYPEGPKGEQGDPGPRGDKGRKGSSGFLGRPGPKGYKGFKGEEGLSG
TKGDRGLPGLPGNPGLPGEMGLPGPPGYGPQGIRGFKGSKGVPGPPGLPGEAGLKGETSR
ITPLPALPGPQGPYGLPGPPGVPGRVGTNGQPGDPGHPGPTGDTGFPGLGFPGNPGPKGD
KGLTGGRGLPGCEGKIGEPGQAGNLGQPGEKGDPGMIIHGEPGRLGSPGGRGIPGPKGDT
GFPGLPGLPGRAGHDGDDGLRGDPGSPGIPGDPGFPGKPAECLTGRPGLPGGQGATGPPG
GRGSLGSKGKLGPPGLGIPGIYGKPGEPGLIGLQGNTGLPGLKGQSGRPGIDGVPGPRGE
PGIMGPLGIPGPPGMIGSPGNLGVRGSFGFPGLKGRKGFLGAKGEPGDKGFPGPSETLVG
IGNKGEQGPKGVQGRMGLRGEKGDAGVQGPPGLVGSEGVPGIPGAKGFMGLPGIPGGQGF
PGAPGNKGNMGIPGSKGQKGSPGFPGPSGDPGPTGYGGFPGEKGDPGHPSPGPPGEPGPK
GDSGAPGLLGSKGEKGSQGQPGHKGVPGPHGIRGETGVAGIPGKPGPPGGVGVKGQQGHP
GQQGIIGPPGAVGYPGENGLGGERGSQGRDGMPGPPGVKGEPGAPGRGIPGLRGVPGRRG
IKGDMGLPGFPGPPGVKGRQGDQGPIGPPGLMGLPGFQGATGMAITGPKGNRGLAGADGR
PGAPGFQGLPGLPTPSMKGNKGVRGADGIPGPTGPTGNSGPPGPKGIEGRPGYPGARGDP
GFLGFPGVKGEKGNQGPPGPQGAEGPRGPKGQRGPPGVPGRIFSVPGSKGPPGLPGVPGT
PGDQGIQGIPGLQGPKGVKGLPGSFGRPGQPGLPGPKGDRGFPGERGQPGLIGFPGLQGL
PGSPGTIITGPTRRGFIFTRHSQTTKIPSCPPGTSQIYVGFSLLFVQGNERAHGQDLGTA
GSCLQRFTTMPFLFCNTNDVCSFASRNDYSYWLSTATAMPVDMAPISGRALEPHISRCIV
CEGPAMVIAVHSQTTVVPACPEGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRA
IPFIECHGRGTCNYYTNSYSFWLASLNPQRMFRKPLPQTLKAGELENIISRCQVCMKRPV
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgggggctgtcccggccgcctgctgccgcttctgcccctgctgctgctggta
ctgctggtactgctcgccctgctccggccgggccgcgccgcggcggctgagagctgtgta
tgcaaaggtaaaagtccttgcttttgtgacggcacaaaaggtaataagggtgaaaaaggt
ttccctggtgtcccaggtccacctggtcatagaggctttcccggtccagaagggcctcca
gggccacaggggccaaagggttcaccaggacttacgggcttagttggacccaaaggtata
cggggagccccaggaatacctggattttcaggtcccccaggtcttccaggtgaaccagga
gctgctggccctcctggacgctcgggtgttccaggatgcaacggcacaaagggcaatcaa
ggttttccaggtcctccaggtagaagaggtgctccaggcattccaggtgtcactggcatt
aaaggagagaaggggtgccctgcagatggatataaccaaggatatgatgcaaaaggtgat
cctgggttgccaggaatgcctggacttcagggtgcccagggtgttcaaggatatcctggg
gaaaacggaccacagggccctccaggaacttcaggaatgccagggagaccaggacctcct
ggacctaagggtcttatgggaataaaagtaataggaaccaaaggaagaaagggtgacact
ggattaactggaccccctggaccaccaggaaccgttattgtgacattaagtggaccagac
aacatgacggacttgaaaggagagaaaggggaaaaaggatcaagaggacttccaggacca
atggggtttacagggccagttggtgattctcaaagtgaaaagggtgaccaaggagaaccc
ggaccacagggtaaacctggaaaagaaggtgccccaggtccacctggcttaccgggacaa
aagggcgaacagggcaaaccaggagtggctggcagacaaggagctaaggggataaaaggc
aacactggtccacctggagcttgtggtcgaacagagtattatgataatgtagttggtgat
aagggagatgaaggaccccctggacctccaggaccaaaaggtcaacgtggtatgcctggg
ccacagggtcctcctggaggtgctggtagaccaggtgtgtcaagacctggtctgagaggt
cccccaggatttcctggcccaaaaggaacaaaaggagaaaaaggacaaacgggcttgtgc
attgtaggccctccaggactacctgggattactggcagacctggttctgttggattacca
ggtcctccaggagaaccaggtagagtaatatttagaacaggcccaccaggacgtcctgga
gagccagggtgtgcaggacctccaggacctccaggagatgttggcatgaaaggtgatgaa
gcttacgtgtgtactgattgtagctatgttccgggaacacctggtcttcctggttcgcct
gggccacgtggccaggatggcatccctggtagggaaggaacacaaggtcccaaaggagct
ccaggttctccaggagcaccaggttttccaggagctcaaggacatccaggttttaaagga
gatcaaggacataaaggatcaaaaggtgagccaggatacgtgtatccagaagggccaaaa
ggtgagcaaggagatccagggcccaggggagacaaaggaagaaaaggttcaagtggattt
ctgggaagacctggcccaaagggctacaagggttttaaaggtgaagagggattgtctggt
acaaaaggagatagaggactacctggactgcctggtaatcctggtctccctggagagatg
gggcttcctggaccaccaggatatggaccacaaggaataagaggtttcaaaggctctaaa
ggagtacctggtcctcctggattgcctggagaagctggtctgaaaggagagaccagtagg
ataactccgttgcctgcattgccaggacctcagggaccatatggtttacctggaccccca
ggggtgcctggtagggtcggaacaaatggtcagccaggtgatccaggacatccagggcca
acaggtgacacaggctttccagggcttgggtttcctggaaacccaggtccaaaaggagat
aagggacttactggaggcagaggattaccaggttgtgaaggaaaaattggagagccaggc
caagctggaaatctgggacaaccaggagaaaagggggacccaggcatgattattcatgga
gagccaggcagacttggttcaccaggaggtcgtggcattcctggtccaaaaggtgataca
ggatttccaggacttccaggcctaccaggacgtgctggacatgatggtgatgatggccta
agaggagatcctggctcacctggaattccaggggatccaggttttccagggaaacctgct
gagtgtcttactggccggccaggtttgccaggtggccagggagctacaggcccaccagga
ggaagaggttcattaggttcaaaaggaaaacttggtcctcctggcttgggtatcccaggg
atctatggaaaaccgggggaacctggcttaattggtcttcagggaaacacaggattacct
ggtctcaagggacagtctggaagaccaggaatcgatggtgtgccaggccctaggggagag
ccaggtataatggggccattaggaattcctgggcccccaggcatgattggaagtccaggc
aacctgggtgtcagaggttcttttggcttcccaggactaaaaggaagaaaggggtttctt
ggagcaaaaggtgaaccaggtgataaaggttttcctggaccatctgagaccttggttggc
attggaaataaaggagaacaaggcccaaaaggagtccaaggaaggatgggtctaagagga
gaaaaaggagatgcaggtgtacaaggtcccccaggtcttgttggatctgaaggagtacct
ggtataccaggtgccaaaggatttatgggtcttccagggattcctggagggcaaggattc
ccaggtgcaccaggaaacaaagggaacatgggaattccaggttcaaaagggcagaaagga
tctccaggctttccaggaccatcaggtgaccctggtccaacaggctatggtggctttcca
ggtgaaaaaggagaccctgggcacccatctcctgggcccccaggagaacctggtccaaag
ggagattcaggtgctcctggacttttgggcagcaaaggagaaaaagggtcccaaggtcag
ccaggacataaaggagtaccagggccacatgggatcagaggagaaacaggagttgcagga
atcccagggaaacctggacctcctggaggtgttggtgttaaaggacagcagggtcaccca
ggacaacagggcattataggccctcctggtgctgttggataccctggagaaaatggactt
ggtggtgaaagaggcagtcagggtcgggatggtatgcctggtcccccaggagtaaaggga
gaaccaggggcaccagggagaggtatccctggccttcgaggtgttcctggtcgtagagga
atcaaaggggacatggggctgcctggttttcctgggccaccaggtgtgaaaggtcgtcag
ggtgatcaaggacccattggacctcctggcttaatggggttacctggatttcaaggtgca
acaggcatggcaattactggcccaaaagggaatagaggccttgctggtgcagatggaaga
ccaggtgctcctggttttcaagggttgcctggtcttcccactcccagcatgaaaggaaac
aaaggtgttagaggggcagatggcataccagggccaacaggtccaactggcaacagtggt
cctccaggtccaaaaggaatagaaggtcgaccaggttatcctggtgctagaggggaccct
ggttttcttggatttccaggtgtaaaaggagaaaagggtaatcaaggaccccctggacca
caaggtgcagaagggccaaggggaccaaagggccaacgtggtccacctggagtccctggg
agaatattctctgtcccaggaagcaaggggcctcctggactgccgggagtcccaggaaca
ccaggagatcaaggaattcaagggattcctgggctacaaggacctaaaggagtaaaaggt
ctaccaggaagctttggtcgtccaggtcaaccaggactgcctggtccaaaaggagaccgg
ggatttccaggagaaagagggcaacctggactgattggctttcctggtctacaggggtta
cctggatcaccaggtactatcatcactggtccaacaagaagaggttttatctttacccgg
catagtcaaacgacaaagattccttcgtgtccgccagggacatcacagatctatgttggc
ttttcgctgctttttgttcaaggaaacgaacgagcgcatggacaagaccttggaacagct
ggtagctgcttgcagagatttaccaccatgccattcttattctgtaacaccaatgatgtt
tgtagctttgcttctcgcaacgactattcatactggctgtcaactgcaacagcaatgcca
gtagacatggcaccgatttctggcagagcactagagccccatataagcagatgcattgtc
tgtgaaggacctgcaatggtaatagcagttcacagccaaacaactgtcgttcctgcatgt
ccagaaggctggatatctctctggaagggtttttcttttgttatgtatacaagtgcaggc
tcagaagcttctggtcaagcgctggcatctcctggatcttgcttggaagaatttcgagcc
atcccattcatagagtgccatggcaggggcacgtgcaattactacacaaactcctacagt
ttctggttggcatcactaaatccacaaagaatgttcaggaaacctctgccacagacactg
aaagcaggagaactagaaaacatcatcagtcgttgtcaggtctgcatgaagagaccagtg
taa
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