Anser cygnoides (swan goose): 106036184
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Entry
106036184 CDS
T04896
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04382
Cornified envelope formation
acyg04510
Focal adhesion
acyg04512
ECM-receptor interaction
acyg04518
Integrin signaling
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106036184 (COL4A4)
04518 Integrin signaling
106036184 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106036184 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106036184 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106036184 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acyg04147
]
106036184 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
acyg00536
]
106036184 (COL4A4)
Exosome [BR:
acyg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106036184 (COL4A4)
Glycosaminoglycan binding proteins [BR:
acyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106036184 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106036184
NCBI-ProteinID:
XP_047919008
LinkDB
All DBs
Position
9:3839388..3907467
Genome browser
AA seq
1678 aa
AA seq
DB search
MALPKDSFERIKWFIRAAWWLLIVFSAQEIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKRGVDGCNGSRGDPGFPGENGYIGPRGPYGNPGQKGEKGNSVFVSHFGKGPP
GERGDPGPPGIPGSRGSRGPTGPPGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGITGYRGPRGPKGILGRGEKGEKGIAGF
PGLRGSPGSYGPAGFPGIKGETGAAGFPGQPGYPGIKGDPGEKGPPGPPGAVGTPLLPVK
GPQGDPGFPGPAGDVGSVGPSGPAGPLGRPGDDGASLPGLPGLSGAPGPQGFHGDPGLPG
TGEPLPGRPGYPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGAKGQIGLPGRKGEKGE
KGNQGLCSCSAGPPGPRGIQGPPGTQGKKGQMGYPGRHGEKGDPGLSGAMGSPGLPGTPG
SAGQHGEKGEKGDLGRVRIKGIKGERGPTGVPGFPGQRGNDGRDGDLGLPGEKGAEGDSG
IPVPGDKGLPGIPGLPGVKGPMGLPGLGIPGPPGVRGTPGDFGDTGSIGPPGLKGQKGET
VSIVSPSPGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGQRGRPGAGIPGPEGFRGK
AGDPGEEGERGSTINGKNGAPGPPGIDGQKGFPGDTTYGPPGIPGNRGLPGPPGAQGARG
DPGIPGLQGQPGTPGFPGAKGFRGPEGDIGAPGCPGFPGPPCDTGLPGPPGLRGVIGLPG
PQGLPGFKGQKGDRGLAGPPGIKGLKGSPGSKGPPGPPGSRGLPGLPGNNGPPGFPGRTG
SKGIQGPQGFLGLPGTQGPMGISGVKGEEGTMGPPGPSGECGDMGMKGERGPPGDSGSIN
IRLEKGQKGEPGFPGENGFRGERGEKGNIGFRGAPGFPGKNGVPGLPGDHGDTGLMGFPG
SRGFPGPKGFKGITGFQGQPGDQGDVGLPGMPGNPGLTGPKGSKGKRGDPTLLLGIRGQK
GPPGDPGLTGFCGLPGEKGSSGIQGQPGRPGSKGESGYPGIPGFPGAPGPPGLPGEPGEK
GKQGILGPPGLQGLAGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGRPGYSGELG
PKGDRGEPGWPGVSIPGAPGERGFPGFPGIRGPVGPAGPRGRSPSSAPPGLPGDQGPPGL
DGIRGQPGNPGPPGETIFVQGDPGDIGIQGAPGISGQRGQQGAKGPPGNQGREGPKGPMG
IHGPQGPPGAVGHPGDQGFQGKPGPKGPTGDPGEPGRIDDSCPTIPGPPGEVGQRGDDGS
IGLSGPIGHPGPQGRKGEEGSCGLPGQDGLPGAPGPPGDQGHVGEQGYTGPQGPPGQTGI
PGPPGPQVRSSSGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGLAGS
CLPVFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMMPLSEEEIQPYISRCAVCEAP
AQAVAVHSQDQSIPPCPMNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFI
ECQGQRGTCQFFANEYSFWLTTVTPELQFASAPLSGTLKEGQEQRKKISRCQVCLKHG
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcattaccaaaggattcgtttgaacggattaagtggtttatcagagctgcctggtgg
ctgctgattgttttttcagcacaagaaattgatgggggaggatacgcatatattgaccca
tgtgggggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
cctggtgagttgggagctcaaggtccaattggatccttgggatctacaggaccagccggt
ctgccgggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagttccaggatttcctggtctagatggtgttcctggatta
ccaggaagtgaaggacccaggggcaaacgtggtgtagatggctgcaatggctcaagagga
gacccaggatttccaggcgaaaatggatatattggacctagaggtccttatggaaatcca
gggcagaaaggagaaaaaggaaattcagtgtttgtttcacattttggaaaaggaccccca
ggagagaggggtgatcctggaccccctggcattcctggttctagagggtcaagaggtcca
acaggcccacctggatacccaggccaaccaggcttgcccggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggggtagatggacaaaagggggagccgggt
gatgttggacttcctggaccacctgggtcgccattgttagttggacctcctggagctcag
ctgtttaaaggagaaaagggccaaaaaggactacccggaataacaggatacagaggacca
cgtggacccaaaggtatacttgggagaggagaaaagggtgaaaaaggcattgctggattc
cctggattgcggggtagtcctggttcatatggacctgcaggctttcctggaataaaggga
gaaacaggagctgctggttttcctggacaacctggctatccaggcataaagggggatcct
ggagaaaaagggcccccaggtcctcctggagctgttggaactccattgcttcccgtgaaa
ggtccacaaggagatcctggatttccaggtcctgctggcgatgtggggtcagttgggcca
tctggtcctgcaggcccactggggagaccaggagatgatggagcaagtctgcctggcctg
ccaggactaagtggggcaccaggacctcaaggttttcatggtgatcctggtttgccagga
acaggtgaaccacttccaggaagacctggatatcctggaccgccaggactaccgggacag
ccaggaaggcaagggttacctggactacctagtgtaatttgtactgacagagggatccct
ggggaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgaaaaaggagaa
aaaggaaaccaaggcctctgctcatgtagtgctggtcctcctggtccccgtggtatacaa
ggacctccgggtactcaaggaaagaaaggacaaatgggttaccctggaagacacggagaa
aagggtgatccaggcttatctggtgcaatgggatcaccagggctccctgggacacctggt
tctgctggacaacatggtgaaaaaggagaaaagggtgacctaggacgagttagaataaaa
ggaataaaaggtgaaagaggtcctactggggttccaggatttccaggccaaagaggtaat
gatggcagagatggggatttaggattgcctggggagaaaggagctgagggtgattctgga
ataccagtgccaggtgataaaggactccctggaatcccaggactccctggagtaaaagga
ccaatgggactgccaggtttggggattcctggccctcctggagtcagaggtacccctgga
gactttggtgatactggtagcattgggccgcctggtctaaagggtcagaaaggtgagact
gtcagtattgtatcaccatcccctggaaacccaggtcccccaggttttaaaggtgttcaa
ggaccaaagggtttaaaaggactccctggtcgtcctggaccaaatggctttgatgggcaa
aaaggccagcgaggcagaccaggagcaggaatccctgggccagaaggcttccgaggcaaa
gctggtgatcctggtgaggaaggtgaaagaggatccaccattaatggtaaaaatggcgct
ccaggtccacctggcatagatggtcagaaaggttttccaggtgatactacatatggtcct
ccaggaatcccaggcaataggggactgccaggaccacctggtgcacaaggagcaaggggt
gatccaggcattcctgggcttcaagggcagcctggtaccccaggatttccaggtgctaaa
ggttttagaggcccagaaggtgatataggagcaccaggctgtccaggcttccctggtcca
ccgtgtgacacgggattaccagggccaccaggactcagaggtgtcataggcctgccaggc
cctcaaggcttaccaggctttaaaggtcagaagggagataggggcctagctgggccacct
ggaatcaaaggtctcaaaggctctcctggctcaaagggccccccaggtcctccaggctcc
cgaggacttccaggacttccaggtaataacggaccacctggcttcccaggacgaacagga
agcaaagggattcaaggaccccaaggattcctaggactcccaggaacacaaggcccaatg
ggaatctctggtgttaaaggtgaagaaggaacaatgggtccacctgggcctagtggagaa
tgtggggatatgggaatgaaaggtgaaagaggacctccaggagacagtggctccattaac
attcggcttgagaaaggacaaaagggagagccaggcttccctggtgagaatggatttaga
ggtgaaagaggtgaaaaaggcaatattggtttcagaggtgccccaggatttccagggaag
aacggtgtcccaggactgccaggtgaccatggtgacactggactgatggggtttccagga
tcacggggtttcccaggaccaaagggctttaaaggaattacaggtttccaaggacaacca
ggtgaccagggtgatgttggcttaccaggaatgcctggaaacccaggattgactggccca
aaaggatctaaaggcaagagaggtgacccaactcttctgcttggtatacgtggtcaaaaa
gggcctcccggagacccaggattaacaggattctgtgggttacccggagagaagggttca
tcaggtatccaaggacaacctggaagaccaggatccaagggcgagtctggatacccagga
atacctggatttccaggagctccaggtcctccaggattgccaggagaacctggagaaaaa
gggaaacaaggaattttgggacctccaggattgcaaggattagctggatcacagggcagg
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcaaaaaggt
tctgcaggagctccaggtcaaagtgaaacagggcgcccaggatactcaggagaacttgga
ccgaaaggtgacagaggtgaacctggatggcctggtgtttccattccaggcgcccctgga
gaaaggggattcccaggattcccaggtataagagggcctgttggacctgctggacctagg
ggaagatctcccagtagtgcccctcccggtcttccaggtgatcagggaccacctggttta
gatggcatcagaggacagcctgggaatcctggtcctcctggagaaaccatctttgtgcaa
ggagatccaggcgacattggtattcaaggggcaccaggtatttctgggcagcgagggcaa
caaggagccaaaggtcctccagggaaccaaggaagagaaggcccaaagggtcctatggga
atccatggcccacagggtccacctggtgctgtaggacacccaggagaccaaggttttcaa
gggaaacctggtcctaaaggtcccacaggtgaccctggtgaaccaggaagaatagatgac
tcatgccctacaattccaggacctcctggggaagtgggacaaagaggagatgatggctct
ataggattatcaggtccaataggtcaccctggaccccaaggaagaaaaggtgaagaaggg
tcctgtggcctgccaggtcaagacggtttacctggggcacccggaccaccaggtgaccaa
gggcatgtaggagagcaaggatacactggaccgcaaggtccacctggccagactggtatc
ccaggaccaccaggcccccaggttagatcttcaagtggattcttgcttgtccttcacagt
cagtcagacagagaaccactctgtccacagggaatgccaaagttatggacaggctatagt
ctgctgtacctggaaggacaagaaaaagctcacaatcaagatcttggtttagcaggatct
tgtcttcctgtatttaatactatgcccttcgcttactgtaatatcaaccaagtttgttac
tatgccagccgaaatgataagtcttactggttgtcaagtgctgctcctttaccaatgatg
ccactctctgaagaagaaatacaaccctacataagcagatgtgctgtatgtgaggcccca
gcccaagcagtagcagttcacagccaagatcagtcaattcctccctgccccatgaactgg
agaagtctttggataggatattcttttttgatgcacactggatctggtgatcagggtggt
ggacagtcccttatgtcacctggaagttgcttagaagacttcagatcagcaccattcatt
gaatgccagggtcagcggggaacttgtcagttttttgctaatgagtatagtttttggcta
acaacagtgacgcctgaactgcagtttgcatcagcgcccttgtcaggaactcttaaagag
ggacaagagcagaggaaaaaaatcagtagatgtcaagtatgcctgaagcatggttaa
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