Anser cygnoides (swan goose): 106036195
Help
Entry
106036195 CDS
T04896
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acyg04040
]
106036195 (TRPC1)
Ion channels [BR:
acyg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106036195 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
106036195
NCBI-ProteinID:
XP_047918869
LinkDB
All DBs
Position
9:complement(2518485..2541081)
Genome browser
AA seq
782 aa
AA seq
DB search
MAALYHSADPSVSASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEERDCAGIFCEKQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRF
SYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSY
FDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENY
QKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYP
RN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccacagcgcggacccgtccgtctcggcctcgccgaacaagctgctg
gcgctaaaggacgtgcggcaggtgaaggaggagaccaccctggacgagaagctcttcctc
ctggcctgcgacaaaggtgactactacatggttaagaaactcttagaggaaaacagctcg
ggtgaaatgaacataaactgtgtggatgtgcttggaagaaatgctgttaccataaccatt
gaaaatgaaaatttggatattctacagcttcttctggattatggctgccagtcatcagat
gcacttttggtggctattgactcagaagtggtgggagctgttgacattctacttaatcac
cggccaaaaagatcttccagaccaaccattgtaaaactaatggaacgcattcagaaccca
gagtactcaacgaccatggatgtggcacctgtcattttagctgctcatcgtaataactat
gaaattctcaccatgctgttaaagcaagatatatcgctacccaaacctcacgctgtaggc
tgtgaatgcacgctctgtactgcaaaaaacaaaaaagatagtctgcgacattccaggttt
cgtcttgacatttaccggtgtttggccagtcctgctttaataatgttaacggaggaggat
ccaattctgcgagcttttgaacttagtgcagacttgaaagaattaagtcttgttgaggtt
gaattcagaaatgattatgaggagctagctcaacagtgcaaaacctttgctaaagacttg
ctcgcacaagcacggaattcacgggagctggaagttattctgaatcatacatctagcgat
gaacatgtagacaagcgaggattgttggaagagaggatgaacttaagtcgcttaaaactg
gcaatcaagtataaccaaaaagagtttgttgctcagtctaactgccagcagtttcttaac
actgtgtggtttggacagatggcaggctatcgacgcaagcacacgtgcaaaaaaattttg
actgttttgatggttggcattttctggccagttctgtccctgtgttacttattagcccct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacatttcttttattacttaatttgtactccctcgtctataatgagaataag
aagaatacaatggggccagcccttgagagaatagactatcttctgataatatggctaatt
ggaatggtgtggtcagatgtcaaaagactctggtatgacggtttagaagactttttagaa
gagtcccgtaatcagcttagttttgtcatgaattccctgtatttggcaacttttgctctg
aaagtagttgcccataacaagtttcatgattatgctgaaagaaaggattgggatgcattc
catcctacattagtggcagaaggtctttttgcttttgctaatgttctaagttacctacgc
ctgttcttcatgtacacaaccagctctattctgggaccactccagatttcaatgggacag
atgctgcaagattttggaaaatttctaggcatgtttcttcttgtcctgttctcattcaca
attggattgacacagctttatgataaaggatttactgtaaatgaagaagaacgggactgt
gcagggattttctgtgagaaacagagcaatgacacattccattcgtttattggcacctgt
tttgctctgttctggtatatcttctcgctggcacatgtagcgatctttgtcacgcgcttt
agctatggtgaagaattacagtcgtttgtgggggctgttattgttggtacctacaacgtg
gtggttgtgatagtattaactaaacttcttgtggcaatgcttcataaaagttttcagctg
atagcaaatcatgaagataaggaatggaaatttgctcgtgccaagctttggcttagctac
ttcgatgacaaatgcacactacctccacctttcaatgttattccatctcccaagactatc
tgttatctcttcaacagtctcagtaaatggatctgttctcacacatcaagtggcaaagtg
aaacgtcagaatagccttaaggaatggagaaatctgaagcagaagagagatgagaattat
caaaaggtgatgtgctgcttagtccaccgttacttgacatccatgagacagaagatgcaa
agcacagatcaggcaaccgtggaaaacctaaatgaactgcggcaagacttatcaaaattc
cgaaatgaaatgagagacctacttggctttcgaacttctaaatatgcgatgttttatcca
agaaattaa
DBGET
integrated database retrieval system
