Anser cygnoides (swan goose): 106036197
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Entry
106036197 CDS
T04896
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106036197 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acyg04121
]
106036197 (TRIP12)
Enzymes [BR:
acyg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106036197 (TRIP12)
Ubiquitin system [BR:
acyg04121
]
Ubiquitin ligases (E3)
HECT type E3
106036197 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
106036197
NCBI-ProteinID:
XP_066858282
LinkDB
All DBs
Position
9:3001790..3076752
Genome browser
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTTEQSKGHFSKRGCSSSAVLIPQQEDPERVNTSEKQKTGQVPKKENSRGVKRSASPD
CSRTNSPSSAKKPKALQHTETSLETNKPHTKSKRRHLDQEQSKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTESLSCIKSGSAVESTGAEEKSAKPSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEQSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSDLKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDEKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVDRYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEVYLISSPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactactactgagcagtccaagggacacttttccaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagaaagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagaaaattctcgaggagttaaacgcagtgctagtccagat
tgcagcaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatactaaatctaagagaagacacttagaccaagaa
cagtctaagtctacacaattgccatcaacgagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagagtctgtcttgtataaagagt
ggttcagcagttgaatcaactggcgctgaagagaagtcagcaaaaccctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttcgacgtcctcttcctcttctgctgttgcctctgcttcttctaccgttcctcagggt
gccagagtgaaacagggaaaggaccagaataaggctagacgttcccgttctgcatccagc
cccagtccaagaaggagcagcagggacaaagaacagagtaaaacaggtggctcttcaaag
tttgactgggctgctcgattcagtccaaaagttagtctccctaaaacaaagctgtctcta
ccaggctcttccaagtcagagacatcaaaacctggaccttcaggactacaggccaagcta
gcaagcctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggagttaactcttcagctgcgcgtactgatgaggctccccaggga
gctgcagcttctagttctgttgctggagctgtaggtatgacaacatctggagaaagtgag
tcagatgactctgaaatgggaagactacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagcccaacagcttttacaaggtctgcaagccactgatgaaagtcag
caactacaggcagtgattgagatgtgccagctgttggtcatgggaaatgaagaaacatta
ggaggatttccagtcaagagtgttgtaccagctttgataacattgctgcagatggagcac
aactttgacataatgaatcatgcttgtcgggccttaacgtacatgatggaagcacttcct
agatcatctgctgtagtggttgatgcaattcctgtcttcttggaaaagctgcaagttatt
cagtgcattgatgtggcagagcaggcactgacagccctagagatgttatcacgcaggcat
agtaaagccattctgcaggcaggtgggttggcagactgcttgctctatctggaattcttc
agtataaatgcacagaggaatgcattagctattgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccat
caggacaaaaagtctgttgaaagcacttgtctctgttttgcgcggctagtggacaacttc
cagcatgaggagaacttgctccaacaggttgcttccaaggacttgttaacaaatatccag
caactcttggtagtgactcctccaatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttcactaatgtgctccaattgtccaacacttgcagtccaacttatgaagcaaaat
attgcagaaactcttcactttctcctttgtggagcctcaaatgggagttgtcaagaacaa
attgaccttgttccacgaagtcctcaagaactttatgagcttacttctcttatctgtgaa
ctgatgccttgtctgccaaaagaggggatctttgctgtcgatactatgctgaagaaagga
aatgcgcaaaataccgatggtgcaatatggcaatggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggtgggtgaggatgag
ataagcctgtcgacacttgggcgtgtctatactattgattttaactctatgcagcaaata
aatgaggatactggaacagcacgtgccattcagcggaaaccaaaccctttagccaataca
aacactagtggacattcagatttgaagaaggatgatgcccgagcacaactaatgaaagaa
gacccagaactggcaaaatcctttattaaaacattgtttggtgtcctttatgaagtgtat
agttcttcagctggacctgctgttagacacaagtgccttagagcaatacttaggataatt
tattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcat
attgcctccatgctgtcaagtcaagaccttaagatagtagttggagccctgcagatggca
gaaatcttaatgcaaaagctacctgacatttttagcgtttacttcagaagagaaggagtg
atgcaccaagtgaaaaacttagcagagtctgaggctttgctaacaagcccaccaaaagta
tgcactaatggatcaggaacgctgggtaccactacaacaataagtactggaacagccact
gctgccagtaatgcagctgcagatttgggctctcccagcctacaacacagccgggaggat
tctttggatctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgccg
aaacgagggccaaggagaccaaaatactctcctccaagagatgatgagaaagtagacaat
caagctaaaagccctacaactactcaatctcctaaatcttccttcttggcaagtctaaat
ccaaaaacatggggaagattaagcacacagtctaacagtaataacattgaaccagcacga
acagcaggagtaagtggtcttgcaagggctgcttccaaggatacaatttccaataacaga
gaaaaaattaagggctggattaaggagcaggcccataaatttgtagaccgttattttagt
tctgaaaacatggatggaagcaatcctgcactaaatgttttacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggagtctgacgtctcctcatttgaaatccagcatagtggatttgtgaaacaa
ctgctgctttatttgacatctaaaagtgagaaagatgctgtaagcagggatatcagattg
aaaagatttcttcatgtatttttttcctctccacttcccggggaagagccccttggaaga
ctagagccattagaaaatgcacctttgttggcattagtccataaaatgaacaattgcctc
agtcagatggaacagtttccggtcaaagtacatgacttccccagtggaaatggaacaggg
agcagtttttctcttaacagaggatcacaagctttaaagttcttcaatacacatcaatta
aaatgccagctgcaaagacatccagactgtgcaaatgtgaaacagtggaagggtggacct
gtgaagattgatcctctggctttggtacaagccattgaaagataccttgtagttagaggt
tatggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagactgcaattt
tacattggagatcacttgctgccatataatatgactgtgtatcaagcagttaggcagtac
agtttgcaagctgaggaggagagggagtctacggatgatgaaagcaacccgttaggaaga
gctgggatttggacaaaaacacataccatttggtacaaacctgtgcgagaggatgaagat
ggtaacaaggactgcgttggtggtaaaagaggaagagcgcaaactgctccaacgaaaacc
tcacctagaaattctaaaaagcatgatgaactgtggcacgatggtgtatgcccttcggta
ttaaatcctttagaagtttatcttatatcttctccacctgaaaacataacgttcgaagat
ccttcattagatgttattcttcttttgagagttttacacgctatcagtcgatactggtat
tatttgtatgataacgcaatctgcaaggagattattccaacatcagaatttatcaacagt
aaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacaggaaac
ataccaacctggctgacagaacttggaaaaacatgcccatttttctttccatttgatacc
cggcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactg
gatactaatccagaaatcaatcagtcagattctcaggatagcagagtggcaccacgactg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcaca
ggcctaggccctacactagagttctatgcacttgtatctcaggaactacagcgagcggat
ttaggcctttggaggggagaagaagtaactttagccaatccaaaaggaagccaggaaggt
accaagtatattcataatcttcaaggcctttttgcacttccttttggtagaactgccaag
ccagctcacattgcaaaagttaaaatgaagttccgctttttgggaaaactaatggcaaag
gcaatcatggattttagactggtggaccttcctcttggacttcctttttataagtggatg
ttacggcaggaaacttccttgacatcacatgacttgttcagtattgatccagtagtagcc
aaatcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggacaaa
acgcagaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctca
gtggaagatctagggctggacttcacacttcctgggtttcctaatatagagctgaaaaaa
gggggaaaagacacgccagtcaccatccataatttagaggaatacctcagattggtgata
ttctgggcactaaatgaaggcgttgccagacagtttgactctttcagagatgggtttgaa
tcggtcttccccctcagtcatcttcagtacttctatcctgaggagttggagcagctcttg
tgtggcagcaaaactgacacctgggatgcaaagacattaatggaatgttgcaggccagat
cacggttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagtttt
gatagtgagcagcaaagactgtttcttcagtttgtgacgggtagccccagactgcctgta
ggaggctttcgaagtttgaatcctccattgacaattgtacgcaagacatttgagtctaca
gagaatccagatgacttcttgccctcagtaatgacttgtgtgaactatctcaaattgcca
gactattcaaccattgagataatgcgtgaaaaactcttaatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
