Anser cygnoides (swan goose): 106037039
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Entry
106037039 CDS
T04896
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acyg03037
]
106037039 (WHRN)
Cilium and associated proteins [BR:
acyg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
106037039 (WHRN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
CCM2_C
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
106037039
NCBI-ProteinID:
XP_066836812
LinkDB
All DBs
Position
20:9476948..9527950
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AA seq
923 aa
AA seq
DB search
MSAEPDSASLRSSSSSSGSAGPAPVPPRPLSSNVRRLHQALTALLSEAERERFVLCLNAY
HGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLAPPHPPPQP
PGELRQVSLRRSKAHQGLGFSIRGGAEHGVGIFVSLVEPGSLAEREGLRVGDQILGVNGK
PLDRATHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSPPLGLPHHQ
NSSLRKDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYITGVDKGSEA
ESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHARTTVDETRWI
ASSQIGETLVNSAGAAGDHAAEAAARPVFYRGLAGSQVTLSSMVNQTRVMLEEQARHLLN
EQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISPQDLDRFDNLV
LKREIESMKARQPSGPSIGTDSYSMMSYSDTVSSSSSHFTSTTVSSARERLLWLIDLMEN
TSELEGGGDGHQSSINTLPDISLDDLSSFPEEPPNFKPPPPPSAPQMLDPSAAQHRNPGK
DKPKRPSSESSQSGLFFVAPRNPTPPLNHSEQDTASMTSTATTSTEESAPSPIYATISPS
LHSSRRQMDAQLSLVSQHPIGPFPRVQSPTRLKSPTAEGPAAAGHHSPASPSPPPPPAHP
APPPPDRGSPRAVANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQTLSEDS
GVDIGEVEMGGKDKSRQPVPGKSRSLKEAARSEAAAEGASKPPGLLEPTSCLIRVSKSAP
TLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRGKEHREAARII
AEAFKLKEKDYIDFLVTEFNVAL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagccggactcggcttcgctgcgctcctcgtcgtcgtcgtcgggctcggcg
gggccggctccggttcccccccggccgctgtcgtccaacgtgcggcggctgcaccaggcg
ctgacggcgctgctgagcgaggcggagcgggagcgcttcgtgctgtgcctcaacgcctac
cacggccgccgcaacgtctgcgacctggtgcgctccctgcgagccctcctcgacgggccc
cgccgccggcagctcctgccgctgctgcgcctcgtcctgccgcgctccgaccagctgctc
ttcgaccagtacacggccgaggggccctacctggcgcccccccaccccccgccgcagccc
cccggggagctccgccaggtcagcctgcggcggagcaaagcccaccaggggctgggcttc
agcatccgcggcggcgccgagcacggcgtcggcatcttcgtgtccctggtggagcccggc
tcgctggccgagcgggaggggctgcgggtcggcgaccagatcctgggggtcaacggcaag
cccctcgacagggcgacccacgccgaggccgtcaaggtcctgaaaggctgcaagaagctg
aacctgtccgtacactcggtgggccgcatccccgggggctatgtcaccaaccacatctac
acctgggtggacccgcagggccgcagcgtgtccccgccgctgggcctgccgcaccaccag
aacagctcgctgcgcaaggacagcgagaagaggagccacctccagctcctgcaggagggc
gatgagaaaaaggtcaatctggtcctgaacgaagggaagtccctggggcttatgatccga
ggaggggcagaatattccttgggcatctacatcaccggcgtggacaaaggctccgaagca
gagagcacgggcttaaaggtaggagaccagatcctggaggtgaacggccggagcttcctc
agcatcccccacgacgaggcggtgaagctgctcaagtcctcccgccacctcatcatgact
gtgaaggacattgggaggctgccccacgcccgcaccaccgtggacgagaccaggtggata
gcaagctcccagatcggagagaccctggtcaactcagcaggggcagcgggcgatcacgct
gcggaggcggcagccaggcctgtgttttaccggggcttggcgggctcgcaggtaacgctg
agcagcatggtgaaccagacccgagtcatgctggaggaacaagcgcggcacctgctgaac
gagcaggagcgagcgaccatggggtactacctggatgagtacaaggaaggcaacatctcc
gtggatgctctggtcatggcgctcttcgagctgctcaacacgcacgctaagttctcactg
ctttcagaggtgcggggcgtgatctccccgcaagaccttgaccgtttcgacaatctggtg
ctgaagagagagatcgagtccatgaaggcccggcagccctcggggcccagcatcggcacc
gactcctactccatgatgtcctacagtgacaccgtctcttcctccagcagccacttcacc
tccacaaccgtcagctcggcccgggagcggctcttgtggctaatagacctgatggagaac
acgtcagagttggagggaggtggagacggccaccagagcagcatcaacaccctgccggac
atctccctggatgacctctcgtccttcccagaggagccacccaacttcaagcctccccct
cctccttcagccccccagatgctggacccctctgctgcccagcaccggaacccggggaag
gacaagcccaagcgcccgtcctccgagtcctcccagtccggcctcttcttcgtggccccc
cgaaaccccacgccccctcttaaccactccgagcaggacacagccagcatgacctccacc
gctacgacatccaccgaggagtctgccccgagccccatctatgctaccatttccccatcc
ctgcacagctcccggcgccaaatggatgcccagctctccctggtcagccagcaccccatc
gggcccttccccagggtccagtccccaacgaggctgaagagccccaccgcggagggcccg
gcagccgctgggcaccacagccccgcttccccgtcccctccgccccccccggcgcacccc
gcgcccccgccccccgacaggggcagcccgcgggccgtggccaaccagcacttcatcatg
gtggaggtgcaccagcccaacagcgagcccgacgtcaacgaagtcaggcccttgccccag
gccagagcctccacgctgtcccagctgtcggacagcgggcagaccctcagcgaggacagc
ggggtggacatcggcgaggtcgagatgggcggcaaggacaagagccggcagccggtccct
gggaaaagccgaagcctcaaggaggccgccaggagcgaggcggcggcagagggggcctcc
aagccgccggggctcctggagcccacctcgtgcctgatccgggtgtccaagagcgcgccg
accctgggaatcgccatcgagggtggagcgaacacgcggcagccgctgccccgcatcgtc
accatccagcgcgggggctcggcgcacaactgtgggaagctgaaggtgggccacgtcatc
ctggaggtgaacggcaccgggctgcggggcaaggagcaccgcgaggccgcccgcatcatc
gccgaggccttcaagctgaaggagaaggactacatcgacttcctcgtcacagagttcaac
gtcgccctgtag
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