Anser cygnoides (swan goose): 106037172
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Entry
106037172 CDS
T04896
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyg03000
]
106037172 (SIX4)
Transcription factors [BR:
acyg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
106037172 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
106037172
NCBI-ProteinID:
XP_013038424
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Position
5:60716955..60728735
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AA seq
793 aa
AA seq
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MSSASPTAEITSAVEIKQENVMEMLSEAVPPDGAAAGALNPAAPPPPPAAAAAPFPMEHG
GEEAAAEQVLLHTELLARNHHAAAAASPSSSSSSSSSSSSSSSSSSSSSSSSQTPLAFSP
DHVACVCEALQQGGNLDRLARFLWSLPPSDLLRGNESLMKARALVAFHQGIYAELYSILE
SHNFDSSNHPLLQELWYKARYTEAERARGRPLGAVDKYRLRRKYPLPRTIWDGEETVYCF
KEKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSES
DGNPSTEDESSKGQEDLSPHPLSSSSDGVTSLSLPSHMEPVYMQQLGNTKIALSSSGVLL
NGNLVPASTSPVFLNGSSFLQGPNGVILNGLSVGASQTVTLNSPKTTSSVVSNGVSITDI
LSSSSEDVKDFKLLQASVPNTAAAATFSPSNIPVSFPGLIPSSEVKRESVETVASQDGGS
VVTFTAPVQINQYGIVQIPNSGTNGQLLNGSIGFSSLQLPPVSVAASQGNVSVNPSTSDG
GTFTSDSSTVQQGKVFFSPLTPSAVVYTVPNSGQTVGSAKQEGLERSLVFSQLMPVSQNT
QLNVNMSSENISSGGLQYLASSLVNVTPSHNFSLTPPTLLNAAELNSGISESQSMSSPVT
STSTVISISNTNYATLQNCSLITSQDLLSISTAQPALGEIVSATGDRVSHPSAQVHQDFV
REHRLVLQAVPDVKENFLPNSESKSTGNLMMLDSKSKYVMSNMVDTVCEELETDKKELAK
LQTVQMDEDMQDL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcctcccccacggccgagatcacgagcgcggtggagatcaagcaggaaaat
gtgatggaaatgctctccgaagccgtgccccccgacggggcggcggcgggagccctgaac
cccgcggcgccgccgcccccccccgccgccgccgccgccccgttccccatggagcacggc
ggggaggaggcggccgccgagcaggtactgctccacacggaacttctggccaggaaccac
cacgctgcggccgccgcttcgccctcctcctcctcctcctcctcgtcgtcgtcctcctcc
tcgtcctcgtcgtcctcctcgtcgtcgtcttcctcgcagacccccctggctttctccccg
gaccacgtcgcctgcgtgtgcgaggcgctgcagcaaggtgggaacctggaccgcctggcc
aggttcctgtggtctttgcccccaagcgatctgctacgtggcaacgagagcctgatgaaa
gcccgggcgctggtggctttccaccagggcatctacgccgagctctacagcatcctggag
agccacaacttcgactcgtccaaccacccgctgctgcaggagctctggtacaaagctcgc
tacaccgaggcggagcgagcccggggcagacccctgggggcggtggacaagtacaggctg
cggaggaaataccctctgcccaggacgatctgggacggcgaggagacggtgtactgcttc
aaggagaagtcccgcaacgcgctcaaggagctctacaagcagaaccgctacccctcgccg
gccgagaagcgcaacctggccaagatcaccgggctgtccctcacccaggtcagcaactgg
ttcaagaaccgcaggcagcgggaccgcaacccttcggagacgcagtccaaaagcgagtca
gacggcaaccctagcacggaagatgaatccagtaaggggcaggaggatttatctccacat
ccgctctccagctcgtccgatggagttaccagcctcagccttcccagccacatggagcct
gtgtacatgcagcagcttggaaacactaaaatagccttgagctcatctggtgtcttgttg
aatggaaaccttgtgcctgccagtacttctcctgtctttctcaatggtagctcttttctt
cagggacccaatggtgtaattctcaatggactcagcgtgggggcttcccagacagtaact
ttaaattcacccaaaaccacttcgagtgttgtgagcaacggggtatccattactgacata
ttgtcatcatcttcagaagatgttaaggacttcaaactccttcaggcttcagtccctaac
acagcagcagccgccacgttcagccccagcaacataccggtctcattcccaggattgata
ccaagctcagaagtgaaaagggaaagcgtagaaactgttgcttcccaagatggaggctct
gtagttacttttactgctcctgtccaaataaaccagtatggcattgtccagatccctaat
tcaggaacaaatggccagctgctgaacggaagcatcggtttttcttctctgcagctgcct
cctgtttctgtggcagcttcacaaggtaacgtttcagtaaatcctagcacatctgatggg
ggaacttttacgagcgactcttcaacggtgcaacaaggaaaggttttcttcagccccctc
actccgagcgcagtcgtttatacagttcccaattcaggtcagacggtaggatctgctaag
caagaaggactggaaagaagccttgtgttttctcagttaatgccggtcagtcagaacacg
caactaaatgtaaacatgtcttctgaaaatatatccagcggaggactccagtacctggcc
tcctcgttagtgaatgtaacgccctcacataatttttccctcacaccacccactctttta
aatgctgcagaactgaactctggtatctcagagagccagtccatgtcatcgcctgtaacc
agtacctctaccgtgatatctatcagcaacactaactatgcaacccttcagaactgttcg
ctcattaccagtcaagatctgttgtccatttctacagcacagcccgcacttggagaaata
gtttctgcaaccggagaccgtgtcagccacccgtctgcacaagtacatcaagattttgtc
agagagcacaggttggttctgcaggctgtacccgatgtcaaggagaatttcttgcctaat
tcggaaagtaagtcaactggcaacttaatgatgctggattcaaaatccaaatatgttatg
agtaacatggttgacacggtttgtgaagaactggaaacggacaaaaaagaacttgccaaa
ctgcagacagttcagatggatgaagatatgcaagacttgtaa
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