Anser cygnoides (swan goose): 106037204
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Entry
106037204 CDS
T04896
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X2
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04137
Mitophagy - animal
acyg04140
Autophagy - animal
acyg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106037204 (HIF1A)
04137 Mitophagy - animal
106037204 (HIF1A)
04148 Efferocytosis
106037204 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyg03000
]
106037204 (HIF1A)
Transcription factors [BR:
acyg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106037204 (HIF1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DUF4350
Motif
Other DBs
NCBI-GeneID:
106037204
NCBI-ProteinID:
XP_013038468
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Position
5:complement(60267997..60297684)
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AA seq
805 aa
AA seq
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MERNLQISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISY
LRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFE
LTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKS
ATWKVLHCTGHIRVYDTCSNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRH
SLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYR
MLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVES
PDMKMTKIFSKDDLDDTNNLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEV
PLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTETLELS
FTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAIDTEAKN
PFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAATITIFQQTQTPSTS
ADEIKPVAERVDDVKTLIVPSSPVHIISDTSSAPASPYSGNRSRTASPIRTGKGTLDQTE
KSCPGTPSLLTVTVNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQQT
GDRGGNAALAWKRVKACKTTGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCE
VNAPIQGNRNLLQGEELLRALDQVN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaatttgcagattagttctgagcgcaggaaagaaaaatcgagagacgcagct
cgatgccgaagaagcaaggagtcagaagtattctacgaacttgctcatcagctgcctctt
ccgcacacggtgagcgcccaccttgacaaggcctccatcatgaggttgaccatcagctac
ttgcgcatgaggaagctgctggatgctggtgagctggagacagaagccaaaatggagaag
gaactgaactgtttctacttgaaagctcttgatggatttgtcatggttctctctgaagat
ggggacatgatttacatgtctgaaaatgtgaacaagtgtatgggactcactcagttcgag
ttgacagggcacagtgtatttgatttcactcatccatgtgaccatgaggagctgagagaa
atgcttacgcacagaaatggtcctgtgaaaaagggcaaagaacaaaacacggagcgcagc
ttttttctcagaatgaagtgtacactgactagcaggggaagaacagtgaatataaagtct
gctacgtggaaggtactgcactgcaccgggcacatccgtgtgtacgacacatgcagtaat
caaactcactgtggctacaagaagcctcccatgacgtgcttggtgttgatatgtgaacct
attcctcacccatccaacattgaggtcccgctggacagtaaaacgttcctcagtcgtcac
agtctcgatatgaaattttcctattgtgatgaaagaattacagagttgatgggatatgag
ccagaggaactcctgggtcgttccatctatgagtactaccatgcgctggattctgatcat
ttgaccaaaacgcaccatgatatgttcacgaaagggcaggtgacaacaggacagtacaga
atgcttgctaaacaaggtggctatgtctgggttgaaactcaagcaactgttatatacaac
actaagaattctcagccacagtgcatagtatgtgtgaactatgtgttgagtggtattgtt
cagaaggacttgattttttcccttggacaaaccgagtgtatgctgaaaccagtggagtct
ccagatatgaaaatgaccaaaatattcagcaaagatgacctggatgatacgaacaacctt
tttgagaaacttaaacaggaaccagatgctttaactgtgctggctccagctgctggagac
acaattatctctctagatttcagcagcaatgagtctgatgaacaacaatgtgatgaagtt
cctttgtataacgatgtaatgctcccctcatccagtgagaaattgcagaatataaatatg
gcaatgtccccactgcctgcctctgaaactacaaagccacttcgtagcaatgctgatcct
gcactcaatagagaagttgtatcaaagctggagccaaacacagagacactcgaactttct
tttaccatgcctcaggtgcaagagcagccaaccagcccttctgatgcaagtaccagccaa
agttcacctgagcccagtagtccaaatgactattgctttgatgtggataatgatatggct
aatgaattcaaactggaattagtggagaaactctttgcaatagatacagaagcaaaaaat
ccattctctactcaggaaacagatttagacttggagatgttggctccttacatcccgatg
gatgatgacttccagctacgctcctttgatcagctatctcccctggaaagcagttcttcc
ggctcccaaaacgcagccactattaccatatttcagcagactcagacaccatcgactagt
gctgatgaaataaaaccagtggcagaacgtgtggatgatgtgaagacgctaattgttcct
tcatctcctgtccacatcatcagtgacacgagtagtgccccagcgtcaccttacagtggg
aacaggagtcgaactgcgtctccaatcagaacaggaaaaggaacattggatcagacagaa
aaatcttgtccaggaacacccagtttgctaacagtcactgtgaataaaagatctactgca
atggatgaagaactaaatccaaagatgctagctttgcataatgctcagagaaaacgaaaa
atggaacatgatggttcactttttcaggcagttggaattgggtctttattccagcagaca
ggtgaccgtggaggaaatgcagcgcttgcttggaaacgtgtaaaggcatgcaaaacaact
ggtcataacggagtggagcagaagacaatcattctactatcaactgacatagcaagtaaa
cttctagggcagtcgatggatgaaagtggactaccccaactcacaagttatgattgtgaa
gtaaatgctcccatacaaggcaacagaaacctgctacagggggaagaactgctcagagct
ctggatcaagttaactga
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