Anser cygnoides (swan goose): 106037368
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Entry
106037368 CDS
T04896
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106037368 (PCDH19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106037368 (PCDH19)
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Protocadherins
106037368 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Ig_Cad99C_N
Cadherin_FAT4_N
PepSY
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
106037368
NCBI-ProteinID:
XP_047933298
LinkDB
All DBs
Position
13:15371855..15547824
Genome browser
AA seq
1090 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVIDPRQPTAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPLGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLISVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQAKDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNNRNAGSNHIYHHTFAGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEP
DQSEGFHCREECRILGHSDRCWMPRSAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCS
AKRTFATFGKEGGEPPAEERAGNPKGKRTVEPAAGSPKVSGAVREAGNGCEAASPVTSPL
HLKSPAAYGGLPCPAGRGQQPPANTGPARPAEAEPRGADSEGGLQEGNPLLQDRREKDSP
AARRLRDIVL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcccggcgctgctgggggccgccttgctgtgggccggcgccggggccctc
gtcaacctcaagtactcggtggaggaggagcagcgggccggcaccgtgatcgccaacgtc
gccaaggacgcccgggacgctggcttcgtgatagacccccggcagcccaccgccttccgg
gtggtctccaactcggccccccacctggtggacatcagccccgggtccgggctgctggtg
accaagcagaagatcgaccgggacctgctgtgccggcagagccccaagtgcgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctc
aacgacaacgcgcccagcttccccaccgaccagatcgagctggaaatctcagagactgcc
agccccggcacccgggtgccgctggagagcgcctacgacccggactcaggcagctttggt
gtgcagagctacgagatcacccccaatgacctctttgggctggagaccaagacgcgggga
gatgggtcccgctttgccgagctggtggtggagaagagcctggaccgcgagacccagtcc
cactacagctacgtgatcacggcgctggatggtggtgacccgcccaacttcggcacggtg
gagctcagcatccgcgtcatcgactccaatgacaacaacccgctctttgaggagccggcc
tacactgtcagtgtgcccgaaaacgccccgctgggtacgccggtcatccgcctcaatgcc
tctgacccggatgagggcaccaacggccaggtgctctactctttccacagctacgtctct
gagcgagcccgggagctctttcagatcgacccccagagcggcctcatctcggtcagcggc
gccatcgactacgaggagggtcatgtctacgagctggatgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccatcagcgtgcaggatgccaatgacaac
ccgcccctcatcaacctgctctctgtcaacagcgagctggtggaggtgagcgagaacgcc
ccgccggggtacgtcatcgccctggtgcgggtctcggaccgcgactccggggccaacggg
cgggtgcagtgcaagctcctgggcaacgtgcctttccggctccaggagtacgagagcttc
tccaccatcctggtggacgggcggctggaccgggagcagagggaccagtacaacctcacc
atccaggccaaggacaatggcgtaccctccctacaggccaccaagtccttcaccgtcaag
atcaccgatgagaacgacaaccatccccacttctccaagccctattaccaggtcatcgtg
caggagaacaacaccccaggggcctacctcctctcagtgtctgcgagggaccctgacctg
ggcctcaacggcagcgtctcctatcagattgtgccctcccaagtcagggacatgcctgtc
ttcacctatgtctccatcaaccccaactctggagacatctatgctttgaggtccttcaat
cacgaacagacgaaggcctttgagttcaaggtcttggcaaaggacggaggtaatccctct
ctgcagagcaatgccaccgtcagggtgattgtcctggatgtcaatgacaacacgcccgtg
atcacggccccaccgctggtcaacgggactgcggaggtgtacatccccaggaacgcgggg
gtcggctacttggtgacagtggtcaaggcagatgactatgacgagggtgaaaatggcaga
ctttcctacgaaatggtggaaggagacagaggattttttgagatagaccaggtcaatgga
gagataaggaccaccagagcctttggggagaatgcaaagacagcctacgagctgattgtg
gtggctcatgaccatggaaaaacatctctgtcggcttcagccttgattttgatatacctg
tctccggccctcgatgcccaggagtccataggatctgttaacctctccctcattttcatt
attgccctggggtctattgcggccattctttttgtcaccatgatcttcgtggcagtaaag
tgcaaaagggataacaaggaaatcaggacctataactgcagaatcgcagagtactcctac
gggcatcagaagaaatctagcaagaagaagaaaatcagcaagaacgatatccgcctggta
ccgcgggatgtggaggagacggataaaatgaacgttgtgagctgctcctctctcacctca
tccctcaactacttcgactaccaccagcagaccctgccgctgggctgccgccgctccgag
agcaccttcctcaacgtggagagccagaacaacaggaacgccggctccaaccacatctac
catcacaccttcgcggggcagagcccccagcagcccgacctcatcatcaacgggatgccg
ctgcctgagactgagaactactcctttgactccaactacgtgaacagcagagctcattta
ataaagagcagctccacgttcaaggacttggaggggaacagcctgaaggacagcggccac
gaggagagtgaccagaccgacagcgagcacgacgtgcagcgcggcctctactgcgacacg
gccgtcaacgacgtgctcaacaccagcgtcccctccatggggtcccagggccccgagcca
gatcagagcgaaggatttcattgcagggaagagtgccgcatcctgggccactcggaccgg
tgctggatgccccgcagcgccgtccccagccgcgccaagtcccccgagcacggcaggaac
gtcatcgccctctccatagaggcgacggcggtggacgcggagccttacgcagactgtagc
gccaaaaggaccttcgccaccttcggcaaggagggcggcgagccgccggccgaggagcgg
gccggcaaccccaaaggcaaaagaacggtggagccggccgccggcagccccaaggtgagc
ggcgccgtccgcgaggcgggcaacggctgcgaggccgccagccccgtcacctcgcccctg
cacctgaagagccccgcggcctacggcggcctgccctgccccgccggccgcgggcaacag
cccccggcgaacactggccctgcccggcccgcggaggcagagcccaggggggcggacagc
gagggcggcctgcaggagggcaacccgctgctgcaggaccgcagggagaaggactcgccg
gcggccaggagactgagggacatcgtcctctga
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