Anser cygnoides (swan goose): 106037420
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Entry
106037420 CDS
T04896
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X4
KO
K16498
protocadherin delta 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106037420 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acyg01009
]
106037420 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106037420 (PCDH11X)
Protein phosphatases and associated proteins [BR:
acyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106037420 (PCDH11X)
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Protocadherins
106037420 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Fibulin_C
Cadherin_4
FctA
TMEM154
Y_Y_Y
Big_9
Motif
Other DBs
NCBI-GeneID:
106037420
NCBI-ProteinID:
XP_013038760
LinkDB
All DBs
Position
13:complement(16820087..17310147)
Genome browser
AA seq
1259 aa
AA seq
DB search
MPQGLPQVEVLPLSGRPATLGVLHKYSLVILEMDLLSGTYLLAVLLACIVFQSGAQEKNY
TVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTTA
NRIDREKLCSGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISI
PENTAINSRYSVPSAVDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDIIET
PEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKEN
DVEVSIPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNATGLITIR
EPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSE
KAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREY
AIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATD
ADSGRNAEISYILGPDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQT
NATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAAVTLSILNG
RDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRQQRSSTAKVTINVVDVNDNRPV
FVIPSSNYSYELVPTSSSPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGN
ITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMET
PVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSG
EWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQT
MGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVV
GCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEMGRPQTPLKEATLEPWTQP
QPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASTSHPLPLGFPQEEYYEQASPNSRTEGD
GNSDPESRLERSRRSFKTTKLSPFLTYSGAIEVNLQKALAEASETCTQECLILGHSDNCW
MPPSLTQYQQSNTPLPSFGFQQGWGRGARPDRCHTLGRSLPKDDTDKVQELALATVPVS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaggccttccacaggtagaggtgctgcctctgtctgggcgtccagctactctt
ggtgttctacacaaatattcattagtcattctggaaatggacttgctgtctggaacctac
ctcttggcagtcttattagcctgtattgtatttcaatctggcgcacaggagaagaattat
acagtgcgggaagaactgcctgaaaatgtcctcattggcaacttgctcaaggatcttaac
ttaacgctggacccagatgtccccctttcctcaccgttacagttcaagcttgtgtataag
actggggatgtaccgttagtacgggtggaggagaacactggtgagatattcacaactgcc
aaccgcatagaccgagagaagctgtgctctggcatctttagtgagaatcgctgcttctat
gaggtggaggttgctgttttgcctgatgaagttttcagactggtcaagatcagattccta
atagaggatataaatgacaatgccccactctttccatcaacagttattaacatctctata
cctgaaaacacagcaattaattctcgctattctgttccatctgccgttgatcccgacatt
ggtgtgaacggtattcaacattatgaacttcttaagcccaaaacagctccgaaaaggacg
tttggatccattacaaatgaccagggtcaaaatgtgtttggtcttgatataattgagaca
cctgagggagataagtggcctcaactgattgtccagcagatcctggatagggagcagaag
gatacctatgtgatgaagattaaagttgaagatggtggaagccctccaagatctagcacc
gccatcctgcaagtcacagtgactgatgtgaatgataatcgcccagtcttcaaagaaaat
gatgttgaagttagtattccagaaaatgctccagtaggcacctctgtttctcagctccat
gccactgatgcagacctgggctcaaatgcacaaatccacttctatttcagcaatcagatc
tccagtttggccaaaaggctgtttgccattgataatgccactggtcttatcaccataaga
gaaccgctagacagagaggaatctcctgtacacaaattaactgttttggcaagtgatggc
agttcaactccatcaagagcaacagtgactgttaatgtcacagatattaatgacaatgtc
ccatcaatagacacaagatacatcatcaatccagtgaatgggacggtgcttttgtctgag
aaagctccacttaatacaaaaattgcattgataacagtaatggacaaggatgctgatctg
aatggaaaggttacttgttttacagatcatgatgtcccttttaggctgaagccagtgttt
gataatcagtttctcctggaaacagccacatttctagattatgaagcaacacgggaatat
gctattaaaatagtggcttcagattcagggaaacctcccttaaaccagtctgcaatgctc
ctgatcaaaattaaagatgaaaatgacaatgccccagtttttacacagcctattataggt
ctttccatccctgaaaacaatgctccaggtactcagctaaccaagataagtgctacagat
gccgacagtgggcgcaatgctgagatcagctatattctgggtcctgatgcaccccccatt
ttcaaccttgaccgccgtacaggcattctgacagcagtcaggaagttggacagagaaaaa
caagacaggtactccttcactgtactggctaaggataacgggatgccgcccttgcagacc
aatgctactgtgacagtgtcagtcctggaccagaatgataacagccctgctttcacacat
aatgaatataatttctatgtgccagaaaacttacccatgtatggcacagtagggcttatc
acagtaacagatgctgactctggagaaaatgctgcggtcactctctctatattaaatggt
agagataatttcattatagatccacttactggtgtaataaggcctaacattacctttgat
agggaacagcaggggtcatacacttttcaggtgaaagctgtggatggaggaagacagcag
cgttcctcaactgccaaagtgaccatcaatgttgttgatgtaaatgacaacaggcctgtt
tttgttattccttcatctaattattcatatgagttggttccaacatcatccagtccaggg
tctgtagttactaaagtctttgcagttgacaatgacacaggcatgaatgcagagctccgt
tacagcatcataggtgggaactcaaggggcttgtttacaattgaccaattaacaggcaat
attactttgaaagagaaggtaattacatcagatcatggtttgcacagactggtgataaaa
gtcaatgacctaggacagccggagtctctttatactatagctcttgtgcatttgtttgtg
aatgagacagtcaccaatagttcctatgtacaagagctagtgcgcaggaatatggaaact
ccagttggccagaacattggggatggtgagataaccccacaaaccaatgattatgtcaag
atcataatagcgattattgcaggaacaatgacagttattctggtaatttttgttactgct
ttagtacggtgccgccagacgcccaggcacaaagttgtccaaaaaaacaagcagagtggt
gaatgggtttccccaaaccaagagaataggcagatcaagaagaagaagaagaagaagaag
cgctctccaaaaagtctcctcctcaactttgtgactattgaagaatctaagcctgatgat
cctggccatgagcacataaatggcactttagacattcctgtagagctagaagaacagact
atgggaaaatataactgggccaccacaccaaccacatttaaacctgatagcccagatttg
gcaaagcactacaagtctgcttctccacagcctacctttcaaattaaacctgagactcct
gtaccccccaagaagcaccatgtcattcaggaactgcctctagataacacctttgtggtg
ggctgtgactcactctccaagtgctcatcaagcagctcggacccttacagtgtttccgaa
tgcagctgtcaaggaggcttcaagaccccaggccccattcacaccagacagcacacaaaa
gaaatgggaagaccacaaactcctttaaaagaagcaacactggagccttggactcagcca
cagcctcagcgccgtgtcacatttcacctaccagatggctcccaggaaagctgcagtgac
agtgggcttggagaccacgaacccaccagcggtgccagtacatcgcaccctctgcccctt
ggctttccccaggaggagtactatgagcaagcatcacccaacagccggacagaaggagat
ggcaactcagaccctgagtccaggcttgagagatcacggaggtcgttcaagactacaaaa
ctgtcaccatttctgacctacagtggtgctatcgaagtaaatctccagaaagccctggct
gaagcctctgaaacctgcacacaggagtgtctcatcctaggccattcagacaactgctgg
atgccaccttctttgacacagtatcaacagtccaacacccctttgccatcatttggcttc
cagcagggctggggccgaggagccaggcctgacagatgccacactcttgggaggtccctt
ccaaaggatgacactgacaaagtccaagagcttgctttggctactgttcctgttagttga
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