Anser cygnoides (swan goose): 106038057
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Entry
106038057 CDS
T04896
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X2
KO
K13126
polyadenylate-binding protein
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03015
mRNA surveillance pathway
acyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106038057 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
106038057 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106038057 (PABPC4)
03041 Spliceosome [BR:
acyg03041
]
106038057 (PABPC4)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106038057 (PABPC4)
mRNA cycle factors
Stress granule specific factors
106038057 (PABPC4)
Spliceosome [BR:
acyg03041
]
Complex C
Other components
Complex C specific factors
106038057 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
106038057
NCBI-ProteinID:
XP_047905508
UniProt:
A0A8B9E1Y5
LinkDB
All DBs
Position
24:complement(7027004..7041404)
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AA seq
632 aa
AA seq
DB search
MNAAAAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVN
FQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDT
FSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKE
REAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSF
EKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYI
KNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQS
RPTYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAANAPASRGLP
AAAQRVGVATAAQNLAPRPPVAAPAPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQ
EPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPES
LRSKVEEAVAVLQAHQAKKEAAQKVGVVAATS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggcggcggcggccagcagctacccgatggcgtcgctctacgtgggcgacctg
caccccgatgtcaccgaggccatgctctacgagaagttcagccctgccgggcctgtgctc
tccatccgggtctgcagggacatgatcacccgccgctccctcgggtacgcctacgtcaac
ttccagcagcccgccgacgctgagcgtgctctagacaccatgaattttgatgtgatcaaa
ggaaaacccattcgcatcatgtggtctcagagggacccctccttgaggaagtcaggggtt
gggaatgtcttcattaagaacctggacaaatccattgataacaaggcactttatgacaca
ttctcagcgtttgggaatattttgtcctgcaaggtggtgtgtgatgagaatggctctaag
ggctacgcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatg
aacggcatgctgctaaacgaccgcaaagtatttgttgggagattcaagtctcgcaaagag
cgggaggctgagctgggagccaaggcaaaggagttcaccaatgtttatattaaaaacttt
ggggatgacatggatgatgaaagactaaaggagctcttcagcaaatacggtaagactctg
agtgttaaagtgatgacagaccccactggaaaatccaaaggctttggctttgtaagcttt
gaaaagcatgaggatgctaacaaggcagtagaagaaatgaatgggaaggatatcaatggg
aaaatggtgtttgtagggcgagcacagaagaaggttgagcgccaggcagagctgaaacgg
aagtttgaacagctaaaacaagagagaatcagccggtaccagggagttaacctgtacatt
aaaaacctagacgacactatagatgatgaaaaactgaggaaggagttctcaccttttgga
tcaataacaagtgccaaggtgatgctggaagatggacggagcaaagggtttggctttgtc
tgcttttcctctccagaggaagctacaaaagctgtgacagagatgaatggacgaattgtg
ggctcaaagccattgtatgttgcacttgcacaaaggaaagaagagcgaaaggcccatcta
actaatcagtacatgcagcgcattgctgggatgagggccttgcctgccaacacaatcatt
aatcagttccagcctgctgctggggggtatttcatgcctgctgtgccccaggcccagagc
agacctacttactatgcacccaaccaaatgacgcagatgagacctaacccacgctggcag
caaggaggacgacctcaaggcttccagggaatgccaaatgccatgcgccagtctggacca
cggccagcactgcgccatctggcccctgctgccaatgccccggcctctcgtggcctccct
gccgctgcccagcgagttggtgttgccactgcagcacagaacttagctcctcgtccacct
gtagctgcccctgctcccagagcggttcctccttataaatacgcctcaagtgtccgcagc
ccgcacccagccgtacagcctttgcaggcacctcagcccgcagtccacgttcagggacag
gaaccactaacagcctccatgctagctgctgcccctcctcaggagcagaaacagatgctg
ggagaacgtttgttccctctgattcaagctatgcaccccagtcttgcagggaagatcaca
ggaatgctgctagagattgacaactcagagctgctgcacatgctagagtctccagagtcc
ctccggtcaaaggtggaggaggctgttgcagtgttgcaggctcaccaagccaagaaagaa
gctgcccagaaggtgggtgtggttgctgctacctcttaa
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