Anser cygnoides (swan goose): 106038663
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Entry
106038663 CDS
T04896
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acyg00536
]
106038663 (COL25A1)
Glycosaminoglycan binding proteins [BR:
acyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106038663 (COL25A1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106038663
NCBI-ProteinID:
XP_066852520
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Position
4:complement(76109992..76412187)
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AA seq
572 aa
AA seq
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MDGKLGQPGPQGPPGPKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAG
PPGPPGPPGPRGPPGDTGKDGPRGMPGIPGEPGKTGEQGLTGPQGPPGQKGSVGVPGVPG
RDGQVGEPGLPGVAGEKGAAGLKGDPGERGEKGDAGENGPKGDTGEKGDPGSSAAGIKGE
PGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPPGKGER
GEPGLPGLKGKTGESGSRGPKGSKGDTGDRGDTGSPGPRGPPGQKGDQGATEIIDYNGNI
HEALQRIATLTVTGPPGPPGPQGLQGPKGEPGSPGVPGVDGEQGPKGSKGDMGEPGMPGE
KGGIGLPGLPGANGMKGEKGDAGLPGAQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEP
GLNGLKGLKGEPGQKGDRGPLGLPGASGLDGKPGPRGVDGPVGPHGPAGPKGDRGEKGTV
GDPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDIGEKGEKGEKGKKGKKGPKGEKGEQGAP
GLDAPCPLGPDGLPMPGCWQKGVTPWLIAKKR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaagctgggtcagcctggtcctcaaggccctcctggtccaaaaggcgagaag
ggagatcaaggtgatcagggccctcggatggtgtttcctaaaatcaatcatgggtttctg
tctgctgatcagcagctcattaaacgccgcctcattaagggggaccaaggacaagctgga
ccccctgggcctccagggccgccaggacccagaggtcccccaggagatactggcaaagat
ggtcctcgagggatgcctggtattccgggtgagcctggaaaaacaggcgaacaaggactg
acaggacctcaggggcctccaggacaaaagggttctgttggagtgcctggtgttccaggg
agagacggacaagtgggtgaacctggtttgcctggtgtagcaggagagaagggagcagca
ggacttaagggtgaccctggagagagaggagaaaagggtgatgctggagaaaatggacca
aagggtgacacgggagaaaagggtgaccctggttcgtctgctgcaggaattaagggtgaa
cctggtgaatctgggcgacctggacaaaagggtgaaccaggtcttcctgggcttcctgga
ctccctgggataaagggtgaaccaggtttcattggtccacaaggagaacctgggttgcca
gggctgccaggaacaaagggtgacagaggagaggcaggcccacctgggaagggtgagcgg
ggtgaacctggacttcctggactaaaggggaaaacaggtgaatctggatctagaggccca
aaagggtcaaagggtgatacaggtgacagaggtgacacaggatctccaggtcccaggggg
ccacctggacagaagggtgatcaaggtgcaacagagataattgattataatggcaatatt
catgaagctcttcagaggattgccaccctcactgtcacgggcccaccaggaccaccggga
ccccaagggctgcaaggtccaaagggtgaaccaggatccccaggagttccaggagttgat
ggggagcagggtcctaaaggatcaaaaggtgatatgggtgaacccggaatgcctggagaa
aagggaggaattggacttcctggcttgccaggagccaatggtatgaaaggtgaaaaagga
gatgctggtttgcctggtgcccaaggcccttcaatcataggaccacctggaccaccaggg
ccacatggtcctccaggccccatgggacctcatggtctgccaggcccaaagggtgaacca
gggttaaatggtcttaaaggattgaagggtgaaccaggtcaaaagggtgacagagggccc
cttggtcttccaggagcatctggcttagacggaaagccaggaccccggggtgtagatggc
ccagttggtccccatggccctgcaggtcctaaaggagatagaggtgaaaagggaacagta
ggtgaccctggacccagaggaccatatggcttgcctggcaaagatggcgagcctggcctt
gatggtttccctggtcctcgaggagaaaagggtgatataggagaaaagggagaaaagggg
gaaaagggaaagaaaggcaaaaaggggcctaaaggggagaaaggagaacagggtgctcct
ggattagatgcaccttgcccattgggtcctgatggattacccatgcctggctgttggcaa
aagggagtcacaccatggcttattgctaaaaagagataa
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