Anser cygnoides (swan goose): 106039094
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Entry
106039094 CDS
T04896
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106039094 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acyg01009
]
106039094 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106039094 (PCDH7)
Protein phosphatases and associated proteins [BR:
acyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106039094 (PCDH7)
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Protocadherins
106039094 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
LYRIC
KIAA1549
Motif
Other DBs
NCBI-GeneID:
106039094
NCBI-ProteinID:
XP_047907099
UniProt:
A0A8B9DN13
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Position
4:21177793..21458426
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AA seq
1286 aa
AA seq
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MRKMRTLLGFVHCCCCCFLLLLPPPLWVSLAAAKQLLRYRLAEEGPADIRIGNVAADLGI
VTGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVI
GPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGI
ERYELLQEPGGDGGRRGGGGGGGGGGGGGGGGSAPTGSESALYPGGSKRRQEADAAARSS
VFELQVADTLDGEKQPQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVN
DNSPRFEKSVYEADLAENSSPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDE
TSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGR
IPLRDGVASVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQN
KRKYFLHTSAPLDYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVADTNDNPPVFGQAVLE
VSFPENNLPGERVATVVATDADSGKNAELTYSLEPSPLSSETPGGIFSIDPDSGDVSVQA
VLDREQRDTYEFQVTARDKGVPSLQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPN
SPVGMVTVMDFDKGRNAELSLSIQPGEHDQAAGIFSIENDTGTIYSTVSFDREQQTSYTF
KVKAVDGGEPPRSATATVSLFVMDENDNAPAVTFPSNSSYTVLPPSSNMRTVVATVVATD
ADTGLNADLNYSIVGGNPFKLFEIDPASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQS
TTALLHVFVNESLSNATVVESQVARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMT
VILLILVVVMARYCRSKGKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSS
IVTVEASKPNGQRYDSVNEKLSDSPGMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQ
SPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQASSKYGKQVDTMQTTQHPGH
IEESCKMNPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPE
DNYERTTPDGSVGEAEHMENDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKQK
SQPKLSTFMPVDERGSQEKLANGEASLMGDRNRNLLNKKLTSSYETFSAASFSKKEEGNP
EDIPLTQTGEYKPSPVNTLTRREVYL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatgcggactctccttggctttgtgcattgctgctgctgctgcttcttgctc
ctcctgcctccgccgctctgggtcagcctggcagcggccaagcagctcctgaggtaccgg
ctggccgaggagggacccgccgacatccgcatcggcaacgtggctgccgacctggggatc
gtgacgggctccggagaggtgacattcagccttgaatcgggctccgactacctcaagata
gataacatgaccggggagctgagcaccacggagcggcgcatcgaccgcgagaagctgccg
cagtgccagatgatcttcgacgagaatgagtgcttcctggacttcgaggtgtcggtcatc
ggcccctcgcagagctgggtggacctcttcgagggccgggtcatcatcctggacatcaac
gacaacacccccaccttcccttccccagtcctcacgctcaccgtggaggagaaccggccc
gtggggaccctctacctgctccccaccgccaccgacagggacttcggccgcaacggcatc
gagcgctacgagctgctgcaggagcccggcggggacggcggacggcgcggcggcggtggc
ggtggtggcggcggcgggggcggcggcgggggggggtcggcgcccaccggctcggagagc
gccctctaccccggcggcagcaagcggaggcaggaggcggatgcagcggcccgcagcagc
gtgttcgagctgcaggtggccgacaccctggacggggagaagcagccgcagctgatcgtc
aagggggcgctggaccgcgagcagcgggactcctacgagctgagcctccgcgtgcgggac
ggcggcgacccggcgcgctcgtcgcaggccatcctgcgggtgctgatcaccgacgtgaac
gacaacagcccccgcttcgagaagagcgtctatgaggcggacctggccgagaacagcagc
cccgggacccccatcctgcagctgcgagccgccgacctggacgtgggggtgaacgggcag
attgagtacgtcttcggggcggccaccgagtccgtgaggcgcctgctgcggctggacgag
acctcgggctggctcagcgtcttacaccgcatcgaccgggaggaggtgaaccagcttcgc
ttcaccgtgatggcccgcgaccgcgggcagccccccaagactgacaaggccacggtggtg
ctgaacatccgcgacgagaacgacaacgtgcccaccatcgacatccggaaaatcgggcgc
atcccgctgcgggacggggtggccagcgtggccgaggacgtcctggtagacacccccatc
gccctggtgcaggtgtcggaccgggaccagggtgaaaacggcgtggtgacctgcaccgtg
gtgggcgacgtgcccttccagctcaagccggccagcgagggcgaaggggagccgcagaac
aagcgcaagtatttcctccacacttcggcccctctggactacgaggcggtccgcgactac
aacgtggtgatcgtggccgtggactcgggcagccccagcttgtccagcaacaactctttg
ctggtgcgggtcgccgacaccaacgacaaccctcccgtgttcggccaggccgtgctggag
gtctccttcccggagaacaacctgcccggcgagagggtggccacggtggtggccacggac
gcggacagcggtaagaacgccgagctcacctactccttggagccctcgcccctctcctcg
gagacgccgggcggcatcttcagcatcgaccccgactccggggacgtgtcggtgcaggcg
gtgctggaccgcgagcagcgcgacacctacgagttccaggtgacagcccgggacaagggg
gtgccgtcactgcagggctccaccacggtggtggtgcgggtggcggaccgcaacgacaac
gagccgcgcttcatgcaggacgtgttcactttctacgtgaaggagaacctgcagcccaac
agccccgtgggcatggtgaccgtgatggacttcgacaaggggcgcaacgccgaactcagc
ctttccatccagcccggcgagcacgaccaggcggccggcatcttctccatcgagaacgac
acgggaaccatctactccaccgtctccttcgaccgggagcagcagaccagctacaccttc
aaagtgaaggcggtggatggcggcgagccgccgcgctcggccaccgctaccgtgtccctc
ttcgtgatggacgagaacgacaacgcgcccgccgtcaccttccccagcaacagctcctac
actgtgctgccgccctccagcaacatgcgcaccgtggtggccactgtggtggccaccgac
gccgacaccggcctcaacgccgacctcaactacagcatcgtcgggggcaaccccttcaag
ctcttcgagatcgacccggccagcggcgtggtgtcgctggtgggcaagctggcccccaag
cactatggcctgcaccgcctcgtggtgcaggtgaacgacagcgggcagccgccccagtcc
accaccgccctgctccacgtcttcgtcaacgagagcctgtccaacgccaccgtggtggag
agccaggtggcccgcagcctccacacgcctctggcccaggacatcgccggcgaccccagc
tacgagctgagcaagcagcggcttagcattgtcatcggcgtggtggccggcatcatgact
gtcatcctcctcatcctggtggtggtcatggcccgctactgccgctccaagggcaagcac
ggctacgaggccggcaagaaggaccacgaggacttcttcaccccgcagcagcacgacaag
gccaagaagcccaagaaggacaagaaaggcaagaagggcaagcagcccctctacagcagc
atcgtcaccgtcgaagcctccaagcccaacgggcagcgctacgacagcgtcaacgagaag
ctctcggacagccccggtatggggcgctaccgctcggtcaacgggggcccgggcagcccc
gacctggccaggcactacaagtccagctcgccgctgcccaccgtccagctgcacccccag
tcccccaccgccggcaaaaagcaccaggccgtgcaggacctgcccccggccaacaccttc
gtgggcgccggcgacaacatctccatcgggtcggaccactgctccgagtacagctgccag
gccagcagcaagtacggcaagcaggtggatacaatgcagactacgcagcaccctggccac
attgaggaatcatgtaaaatgaatccatttcgtagagtgacgttttctgttgtgagtcag
cctcaggacccacatcaagggtcattgcagagttgctatgacagcggtctggaggagtca
gaaacaccaagcagtaagagttcatcagggccaagactgggtgcccttccactcccagag
gacaactacgaaaggactacgccggatggcagtgttggtgaggcagagcatatggaaaat
gattcaaggcctctgccagatgtagccctgacagggaagtgtacccgagaatgtgatgaa
tatggccactcggactcctgctggatgccagttcgcacttctcctgaaaggaagcagaag
agccagccaaaactctccactttcatgcctgttgatgaacggggcagtcaggaaaagctg
gccaatggagaagcttccctcatgggtgatcgcaacagaaacctccttaacaaaaagttg
acctcatcttatgagaccttcagcgcggctagtttcagcaaaaaagaagaaggcaatcca
gaggatatcccccttacacagacaggggaatacaagccatctcctgtcaatactctaact
agaagagaagtttacctgtag
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