Anser cygnoides (swan goose): 106039103
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Entry
106039103 CDS
T04896
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X4
KO
K10754
replication factor C subunit 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03030
DNA replication
acyg03410
Base excision repair
acyg03420
Nucleotide excision repair
acyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106039103 (RFC1)
03410 Base excision repair
106039103 (RFC1)
03420 Nucleotide excision repair
106039103 (RFC1)
03430 Mismatch repair
106039103 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyg03032
]
106039103 (RFC1)
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106039103 (RFC1)
DNA replication proteins [BR:
acyg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106039103 (RFC1)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106039103 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
AAA_22
Rad17
BRCT_2
AAA_30
AAA_5
RNA_helicase
AAA_17
RuvB_N
TIP49
AAA_16
nSTAND3
AAA_33
AAA_18
AAA_7
Zeta_toxin
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
106039103
NCBI-ProteinID:
XP_013041457
LinkDB
All DBs
Position
4:complement(24164667..24205523)
Genome browser
AA seq
1156 aa
AA seq
DB search
MAATPGGSGTTEDIRKFFGVVPPGKRQECENVKKSDKIKNGEGDSSGKKRGKETKVKNSP
SEDVPKQKQTYKKKRIIYDSDSEEEVQSVKKSKKPSEKKAATPKLGKVLKQHPVVYVSET
DEDDDFVNKRISLKPKENGASAISCPGTTTVKKEDVKPRAKPKPLSPVKLTPTSALDFFG
TSSVQRSEKKLVASKRKEPSQSRDSTVDDEAIARQLQLEEDSELERQLHEDEEFARTLAM
LDETPQKKKARRDSEEQAVLSFKSSPNVTDRYKQSQRVKATNSAGEAKQPKSENSKGSHL
PPRSTDGKLAEESTDKTLPLKPTSKLVALKRKEESAEKERGTQSSVSKEKLQGKEEKKTP
KKEKISPKKAESVSPEDSEKKRNNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVI
TGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASALGTKIIDEDG
LFDLVRTMPGKKSKYELAAESEAKKTESRHKKTPQKTETGKKNFSPLKREADIKKRNSTP
EKGGTFKSVKKETAAARKLADFKQQTAEKKEVPEPKGTLVSEINENGTERLLWVDKYKPT
SLKAIIGQQGEQSCANKLLRWLRNWHKNTSEDGQAKASKLGGKDDGISSKAALLSGPPGV
GKTTTAALVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHV
LIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR
LEQIKGAMMSIAFKEGLKIPPPAMHEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTD
ASRAKKDIKLGPFDVVRKVFAAGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAA
AGGDLKKHLMLLSRAADSICDGDLVDKQIRTKQNWNLLPTQAIYSSVLPGELMRGYMSQF
PVFPSWLGKFSSTGKHERIVQELAMHMSLRTQMCKRTVNMEYLSYLRDALVQPLKDFGAD
GVQQAITFMDSYCLMKEDVENIMEISMWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYS
LNSVKTSKRQSGSVATSELSEDLNVDEIQSDEDEQDSVESDAMIKQKKAKSSKLPKREKN
EEPTKKEGKRKEKTRH
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacccctgggggtagtggtaccacagaggatatccggaaattctttggtgtt
gtaccccctgggaagcgacaagaatgcgagaatgtgaaaaagagtgacaaaataaaaaat
ggggaaggagactcgagtgggaaaaagaggggaaaagagactaaggtgaagaattccccc
agtgaagatgttcccaaacaaaagcagacatacaagaaaaaaagaatcatctatgattca
gattcagaagaggaggtgcagtcagtgaaaaagtccaagaagccatcagagaaaaaagca
gccactccaaaacttggtaaagttctaaagcagcatcctgttgtttatgtttcagagaca
gatgaagatgacgactttgtcaataagagaatttccctgaaaccaaaggagaatggggca
tcagcaatcagttgtccaggaacaacgacggtgaaaaaggaagatgtaaaaccacgagct
aaacctaaaccattatctccagtgaagctgactcccacctcagctctcgatttctttgga
acaagtagtgtccagcgatcagaaaagaaactggtagcaagtaaaaggaaggaaccctca
caaagcagggacagcacagtggacgatgaagctattgctaggcaactgcagcttgaagaa
gattcagagctggagagacagttgcatgaagatgaagaatttgctaggactttggccatg
ttggatgaaacaccacagaagaaaaaggctcggagggattcagaagagcaggcagtactg
agcttcaagagcagtcctaatgtgacagacagatacaagcaatctcaaagagtgaaagca
acaaactcagcaggtgaagcaaaacaacctaaatctgaaaattcaaaagggtcccattta
cccccacgatcaactgatggtaaactagcagaagagtcaactgataagaccttgcctttg
aaacctacctctaagcttgtggctcttaaacgaaaagaagagagtgctgaaaaggaaaga
ggcactcaaagttcagtatcaaaagaaaaacttcagggaaaagaagagaagaaaacacca
aagaaggagaaaatttctccaaagaaggctgagtctgtaagtcctgaggactctgaaaag
aagcgaaacaattatcaagcctaccgaagcttccttaatcgcgagggtccgaaagctctg
ggttccaaagagataccccaaggagctgaaaactgcttggaaggcctgacgttcgtaatt
acaggagttctggagtctattgaaagagatgaggccaaatctctgattgaacgttacgga
ggaaaagtaactgggaatgtcagcaagaagacgaactacctggttatgggacgagactgt
ggccaatctaaatgtgaaaaggcatcggctttagggacaaaaattattgatgaggatggc
ctatttgatcttgttcgaactatgccaggcaaaaagtccaaatatgagctggcagctgaa
tcggaggcaaagaaaacagagtcgagacataaaaagacaccacagaaaactgaaactggc
aaaaagaattttagccccctcaaaagggaagctgatattaaaaaaagaaattctactcct
gagaagggaggtaccttcaaatctgttaagaaagaaactgctgccgctcgaaagcttgca
gactttaaacagcaaacagcggagaagaaagaagtcccagaacctaaggggaccttggtc
tctgagattaatgaaaatggaacagagagattgctatgggtggataaatacaagcctacg
tctctcaaggcaatcattggacagcagggtgagcagagctgtgccaataaacttctgcga
tggctccgaaactggcacaagaatacctcggaagacggacaagcaaaggccagcaaactt
ggaggcaaagatgatggtattagttctaaagcagcattactttctggtccacctggagtt
ggtaaaactactacagctgctttagtttgtaaggaactggggtatagctacgtggagctg
aatgccagtgacactcgaagtaagaacagtctaaaggaagtagttgctgaatcgcttaac
aacaccagcatcaaagacttctgttctggcacatcctcatcagttagcgggaaacatgta
ttgatcatggatgaagtggatggtatggcaggcaatgaagacagaggagggattcaggag
ttgattggtttgattaaacacacaaaaatccccatcatctgcatgtgtaatgatcgaaac
catcctaaaatccgttccttggtccactactgctttgatcttcgttttcagagacctcgt
ctagagcagattaagggtgccatgatgtctattgcgtttaaagaaggcttaaaaattcca
ccacctgctatgcatgagataatcctggcagcaaatcaagacatcagacaggttttgcat
aatcttaatatgtggtgtgcaaaagataagtcattgacttatgatgaggccaaaacagat
gccagcagagctaaaaaggatatcaaactgggcccttttgacgttgtccggaaggttttt
gctgctggagaggaggcttctcgtatgtctcttatagacaaatccgaccttttcttccac
gactattccctagcacctctttttgtccaagagaactacgtacatgtgaaaccggctgct
gctgggggagatctgaaaaagcacttgatgctcttgagtagagcagctgatagtatatgt
gatggtgatctagtggacaaacagattcgcaccaagcaaaactggaaccttctaccaaca
caggctatttattcgagtgttctccccggggagctgatgagaggttacatgtcccagttt
cctgtctttcccagctggctggggaaattttcatccacaggcaaacacgaacggatcgtt
caagaactggcaatgcacatgagtctcagaacccagatgtgcaagaggacagtaaacatg
gagtatctgtcttatctgcgggatgcacttgtccagcctttgaaagactttggagcagat
ggtgtacaacaagctataactttcatggactcttactgcctgatgaaagaagatgttgaa
aatatcatggaaataagcatgtggggaggcaaacccagtcctttttcaaagctggatccc
aaggtcaaagccgcttttacacgtgcgtacaacaaagaggcacatctgactccgtattcc
cttaattctgtgaagacatctaaaaggcagtcaggatccgtggcgacctctgaactgagt
gaagacctgaatgtggatgagatccagtctgatgaggatgagcaagacagtgttgaaagc
gatgcaatgattaagcaaaaaaaggcgaagtcttccaagctgccaaaaagagagaaaaac
gaagaaccaacaaaaaaagaagggaaaaggaaggagaaaacaagacattaa
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integrated database retrieval system
