Anser cygnoides (swan goose): 106039207
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Entry
106039207 CDS
T04896
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106039207 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106039207 (VPS8)
Membrane trafficking [BR:
acyg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106039207 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
TPR_Vps41
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
106039207
NCBI-ProteinID:
XP_066858197
LinkDB
All DBs
Position
9:10373904..10451353
Genome browser
AA seq
1401 aa
AA seq
DB search
MDAAPEPGACPAGAEAEPGGLPGLGPPAPRLTAAELDRELDSRSELIDDKEFDIPQVDTP
PTLESILNETDDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDS
LSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALR
LCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAI
LHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVEL
RDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNP
MLAFCRGDVVHFLLVKRDDTGAIHVTKQKQLHLHYDLINFTWINSRTAVLLDSVEKLHVI
DRQTQEELETIEIPEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYL
GTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLSGDTSKRKAVIAD
RMVEILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRTDLLFNQIYDKMSE
NSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENMEACIVHMDITSLDIQ
QVVLLCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKLLV
YISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEGSVDEEVYPHVRTLLHFDTRE
FLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNN
TLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQ
ICEFMYERELRYDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSTEEKQSVWDKALEHIKE
LLLLSPCKAADLVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPCIT
EQFVELLCQYSPDDVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVM
LERLQSKLLMLTQDDESSEQLPLLENIEDTLMKTIALCQRNSHNLNQQQQEALWFPLLEA
MMSPQKLSGSSQYRYAESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGL
VLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQE
TADEIIVFSCGHLYHSLCLLSKECGVVTKGLMRWMCYKCNSSNKGGGKLSENFSELKKGS
AASLTQAGSESVLDPQQIQAFDQLCRLNRGTSRLALLTELSRTHGEKHGLLSVAHGDPAT
SSVFQNETFQLHLAPPPLVEE
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggcgccggagccgggcgcctgccccgcgggagccgaggccgagccgggcggg
ctgccgggtctggggcctcccgctccgcggctgaccgcggcggagctcgaccgcgagctg
gactcccgcagcgagctgattgatgacaaagaattcgacattcctcaagttgatacccct
ccaacgctggaaagcatcttaaatgagactgatgatgaagaagagtctttcattctggag
gatccttttctcttgaacatcgataacacggatacacattcctatgacacatcttctgta
gcaagttctgacagtggggaccggacacacctgaaaaggaagaaaaaactcccagattct
ctttctctccatggatcagttatacgactctcgcttctgaaaggaatttctgcccagatt
gtatctgcagcagacaaagtggatgccggcttgcccactgcaatagcagcatcaaatctg
atagcagtggggacttctcatgggttagcactgatttttgaccaaaaccaggcccttcga
ctgtgtctgggcagcactgctgttggcgcccagtatggggctatctcggctctcagcatc
aacaatgactgttcgaggctcctgtgtggctttgcgaaaggacagatcacaatgtgggat
ctggccagtgggaagctgctacgatcaataacagatgcccaccccccaggaacagctatt
ttgcacattaagtttacagatgacccgacacttgcaatttgcaatgacagcggaggctcc
gtatttgaactgtcatttaagagggttatgggagtgagaacgtgtgaatctcgatgtcta
ttcagtggctcaaagggggaggtttgctgtattgaaccactacatgcaaaagttgagctg
agagaccatcctatcacccagtattcgctattggccatggcctccctaacaaagatacta
gttattggcctgaagccatctctgaaagtgtggatgacttttccctatggtcgtatggac
ccttctagtgtccctcttctggcgtggcattttgtggctgtacagaactctgtgaacccc
atgcttgcattttgtcgaggtgatgtcgttcattttcttttggtaaagagagatgatact
ggtgcaatacatgtcactaagcagaagcagctccatctacactatgacctcatcaacttc
acttggataaattcacggacagcagtgcttctggacagtgtggagaagctgcacgttata
gatcgtcagacacaagaggagctggagaccatagagattccagaagttcagctggtctac
aacagcagccacttcaaatcgctggctacaggaggcaatgtcagcgaagcactggcattg
gttggagagaaagcttgctaccagtccatcagcagctgtggtggtcagatcttttacctg
ggaactaagtctgttcacgtcatgacattgaggagctggagagagagagttgaccacctt
ctgaaacaagagcgtctcactgatgccctggctcttgcttggtccttttatgaaggtaaa
gcaaaggctgtagtaggtttgtctggggacacaagcaagcggaaagcagtcattgcagac
aggatggttgaaatccttctccattatgctgatcggactttgaagaaatgtcctgaccaa
ggaaaaatccaggttatggagcaacattttcaggatgtggtgcctgtcatagttgattac
tgcctcttactccagcgcacggatctattatttaatcagatatatgataagatgagtgag
aattctgtagctaaaggcatctttctggagtgcttggagccatatatcttgagtgataag
ctgatgggaatcacagctcaagtgatgaaagacttgctgcttcacttccaagacaagaac
aggttggaaaatatggaagcttgcattgtgcatatggatatcaccagcttagacatacag
caggtagttcttctgtgctgggaaaaccatctctacgatgccatgatctacgtctacaac
agtgggatgaatgacttcattagccccatggagaaactgttcaaagtcattgctcctccg
ctgaatgctgggaagtctctcacagatgaacaggtggtaatgggcaacaagctgcttgta
tatataagctgctgcttggcaggccgtgcatatccattgggtgatattcctgaagatctg
gtacctctggttaaaaatcaggtctttgaatttctcatccggctacattcagctgaggga
tctgtggatgaagaggtctaccctcacgttcgtaccttgctgcacttcgacactcgggaa
ttccttaatgttcttgctctgacttttgaagactttaagaatgacaagcaagctgtggaa
tatcaacagcgaatcgtggacatacttctgaaagtcatggtagagaattctgacttcacc
ccatcacaggttggctgtctctttactttccttgcccgtcagcttgccaaacccaacaac
acgttgtttgtgaacaggacgctttttgaccaggtccttgaatttctgtgtagtccagat
gatgactcccgccattcagagaggcaacaggtccttttagaattgcttcaggcaggaggg
atagtacagtttgaagagagccgtcttatccaaatggcagaaaaagctgaattttaccag
atttgtgagtttatgtatgaacgagagcttcgctatgacaaaatcattggctgttacctg
cgtgatccagtgagaaaggaagaagttttcaactatattcacaacatcctgtccatgcct
ggctacagtactgaagaaaagcagtcagtgtgggacaaagctttggaacatataaaggag
ttgctgctacttagcccatgtaaagcagctgacttggtagccatccacttcagcgagcag
attgagagcatcattacaaaccttcaggaccagttcttactcttccagtttctaaggagt
ctgcttgatccgagagaaggcatcaaccaagacttgattcatttgccaccctgcatcaca
gagcagttcgttgagctgctgtgtcagtacagcccagatgacgttttggagacgcttaaa
gttctggaatactgcaggctggaagaaaccatccagataacccagaaacatcagctccat
gaagcttcctcatatttactggagaagaagggagatatccatggtgcctttctggtcatg
cttgagcgattgcagagcaagttgctgatgcttacacaagatgatgaaagttcagaacaa
ctccccttgctagaaaacattgaagataccttaatgaaaaccattgctctttgccagagg
aattcacacaacttaaaccaacaacagcaagaggcactctggtttcccctactggaggct
atgatgtccccacagaaactgtctggttcttcgcagtatcggtatgctgaatccttgaag
agtttgacaatgcaagtgctgaacaacatggctgcatttatcgctcttccctcaatccta
cagagaattctgcaggatccagtttatggaaaagggaaacttggagaaattcaaggactt
gtcctgggaatgctggacacttttaactacgaacaaacccttctagagacaactacgaat
cttttaaaccatgatctccactggtccctgtgtaacctaagagcttctgtcactagaggg
cttaccccaaagcaggattactgctgcatttgtctacagcagtacaaaagaaggcaagaa
actgctgatgaaatcattgttttcagctgtggccacttgtaccattctctgtgtctgctg
agtaaagagtgtggggtagtaaccaaaggcctgatgcggtggatgtgctataaatgcaat
tcaagcaacaagggaggaggaaaactgagtgagaacttctcagagctgaaaaaaggaagt
gcggcatccttgacgcaggcaggttcagagtctgtgttagatcctcagcaaatccaagct
ttcgaccaactctgccgactcaaccgaggaacctccagactggctctcctgacagaactg
tcccgcacccatggtgaaaagcacgggctgctcagcgttgcgcacggtgaccccgccacc
agcagcgtcttccagaacgagaccttccagctgcacctggcgccccccccgctggtggaa
gagtag
DBGET
integrated database retrieval system
