Anser cygnoides (swan goose): 106039240
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Entry
106039240 CDS
T04896
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X2
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04136
Autophagy - other
acyg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106039240 (ATG4B)
04136 Autophagy - other
106039240 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acyg01002
]
106039240 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106039240 (ATG4B)
03029 Mitochondrial biogenesis [BR:
acyg03029
]
106039240 (ATG4B)
Peptidases and inhibitors [BR:
acyg01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
106039240 (ATG4B)
Membrane trafficking [BR:
acyg04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106039240 (ATG4B)
Mitochondrial biogenesis [BR:
acyg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106039240 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
106039240
NCBI-ProteinID:
XP_047933150
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All DBs
Position
9:complement(11895873..11915844)
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AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKEPVWILGRKYSVFTEKEEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQMDNYFNVLNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCQSNFSCAGAAACPAVESDVLYNGYPEEAGVRDRLSLWKPLVLLIPLRLGLTEINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPNDSGCLPDESFH
CQHPPCRMSIAELDPSIAVGFFCNTEEDFNDWCQQIKKLSLVRGALPMFELVERQPSHFS
NPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctactcttacctatgacactctcaggtttgaatatgaagacttccctgag
accaaagagcctgtgtggatcctaggccggaaatacagtgtttttacagagaaagaagag
atcctgttggatgtgacctctcggctttggttcacctacagaaagaacttccctgccatc
ggaggaactggtcccacatctgatactggttggggctgtatgttgcggtgtggccagatg
atctttgctcaggccttggtctgcaggcatttgggaagagactggaggtggataaaaggg
aagaggcagatggataattacttcaatgttcttaatgccttcattgacaaaaaagacagc
tactactccattcaccagatagcccagatgggtgttggagaggggaaatccataggtcaa
tggtacggaccaaacacagtcgcacaagtgctcaaaaaacttgccacttttgatacgtgg
agttcactggcagtacacatagccatggacaacactgtagtaatggaagaaatcaggcgg
ttgtgccagtccaacttctcgtgtgctggagctgcagcatgccctgctgtggagtcagac
gtactctataacgggtacccagaggaagcaggggttagagataggctctcactgtggaaa
ccattggtgctgctgatacctctccgccttgggctcacagagatcaatgaagcctatatt
gaaacactaaagcactgcttcatgatgcctcaatccctgggagtgatcggagggaaacca
aacagtgctcactacttcattggttatgtaggtgaggaactcatttacctggatccccac
actacgcagcctgcagtggagcccaacgacagtggctgtctccctgatgaaagcttccac
tgccagcaccctccctgcagaatgagcattgccgagctcgacccctccattgcggtgggc
tttttctgcaacacggaggaggactttaatgattggtgccagcaaatcaaaaagctgtcc
ctggtaagaggagcgctgcccatgttcgaactggttgagcgccagccatcgcacttctcc
aaccccgatgttctgaatctcacgccagattcctctgatgccgacagattggaaaggttc
tttgactcagaagatgaagacttcgaaatcttatccctttga
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