Anser cygnoides (swan goose): 106039674
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Entry
106039674 CDS
T04896
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106039674 (VPS50)
Membrane trafficking [BR:
acyg04131
]
Protein recycling
Others
EARP complex
106039674 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
106039674
NCBI-ProteinID:
XP_013042461
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All DBs
Position
2:25568990..25647873
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AA seq
967 aa
AA seq
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MQKIKSLMARQGLRSPQESVHDLSPIENLRIPSKEELRESREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICANGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDETATVSSV
SDGSNVIGTEENSFDRSYIKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTAVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSGDPTGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatggcccggcagggtctaagaagtcctcaggagagtgtc
catgacctcagtcctattgaaaacttacggattcctagtaaggaggagctcagagaatca
cgggaagaaccaactgatcctcaagctcagcaagaaataattaatagtattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgaattagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagataaattgaaacaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattacagactggtcttcaattagcagctgttatttgtgcaaacggaaga
agacacctgaatattgcaaaggagggattcacacaagctagtttgggacttcttgcaaat
caaaggaaacgacaattgcttattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtacgcttaagtgagatgctagaggaagaggactatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagc
gagttaaattcaaaactgcaagatactttggaacaaatagaggaacaattggatgtagcg
ctctccaagatatgcaagaacttcgatataagtcattacacaaaggttcagcaagcttac
aggctgcttggaaaaacacagacagcaatggaccaattacatatgcacttcactcaagcc
attcacaacacagtgtttcaagtagttcttggatatgtggagctgtgcgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgtaaagccctttgggaagtcatgctcagctattac
cgaacaatgcagtggcatgagaatcatgatcaagatgagacagcaactgtatcttccgtt
tcagatggcagcaatgtgattggaactgaggagaacagttttgaccgcagctacataaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaacg
tatcttctgggaacggatctgtctaacttcaaatatgacgacttcatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacctgggaactttgccctgttaaatccagc
tttagtattttgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcaacagcagtaactttatttgagcagtac
tgtaatggaggaaacccgtttgaaatccaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcggatgaacaagaaaaaagtgcgtatcaggagtat
gatagtgacagtgatgttcctgaggagttgaaaagagactatgtagatgagcagacagga
gatgcccctatgaaaagtgtttctagagaaactctgaggagcagaaagagatcggattat
aacctcaataaagtgaatgcacctatcctaacaaacactacactgaatgtagtaaggctt
gttggtaaatatatgcagatgatgaatattctcaaaccaattgcgtttgatgtgatccac
ttcatgtcccagctcttcgactactatctgtatgcagtttatacgttttttggccgaaat
gacacgtttgaatcaacaggattgggcctcagtagcagcagattacgcacgacgctgaat
agaatccaggagagcctcattgatctggaggtctctggtgatcccacaggaactctcaca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagtagttctg
acatctggcaactcgctgtatggtttggcagaaagagtggtagccacggaatccttggta
tttctggctgagcagtttgagtttcttcaacctcaccttgatgcggtgatgccagctgct
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgc
aaaccagtttattggattgttgctgctaaagccattgattatgaacagatgctgcttctc
atgacgaatgtaaaatgggatgtgaaggaaatcatgtcacaacacaatgtatatgtagat
gctcttttaaaggaatttgaagaatttaacagaaggctgaatgaagtatctaagagagtt
cgtattccactgccggtctcaaatatcctttgggagcactgcattcgcttagctaataga
actcttgtggaaggttatgctaatgtaaagaaatgcagcaatgaaggacgtgccttgatg
caactggactttcaacagttcttaatgaaactagaaaagttaacagacattaggcccatt
ccagataaagaatttgtggagacctacattaaagcatactacttaacagaaaatgacatg
gagcgctggataaaagagcacagggaatattccactaagcacttgacaaatctggtgaat
gtttgtctgggatcccacatcaacaagaaggcaagacagaagctgctggctgctattgat
gacatagacaggcctaaaagataa
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