Anser cygnoides (swan goose): 106039840
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Entry
106039840 CDS
T04896
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04140
Autophagy - animal
acyg04142
Lysosome biogenesis
acyg04148
Efferocytosis
acyg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
106039840 (VPS11)
04140 Autophagy - animal
106039840 (VPS11)
04148 Efferocytosis
106039840 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106039840 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106039840 (VPS11)
Membrane trafficking [BR:
acyg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106039840 (VPS11)
Hops complex
106039840 (VPS11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
TPR_GEMI5
zf-RING_5
zf-C3H2C3
zf-RING_UBOX
Beta-prop_IFT122_1st
zf-RING_11
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
Beta-prop_VPS8
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
106039840
NCBI-ProteinID:
XP_066837318
LinkDB
All DBs
Position
21:complement(1910841..1920081)
Genome browser
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDREVVKEPPGPEGSAGKSFALPPGVTVCDSGRGSLVFGDMEGQIWFL
PRSLQLTSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYLLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGSEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVRFDVETAIKV
LRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALHYIGKLPFDQAESNMKRYGKIL
MHHVPNETTELLKILCTDYQPSGDSEGLGLLEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQSDSPQGVYDTLLELRLQNWAHEQDKQMKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
DCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDEQR
ILKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSD
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPPGKPPTTLEAGLQRELLLHTRRGT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtatctgcagtggcgtcgcttcgtcttttttgacagggaggtggtgaaggag
ccgccggggccggagggctctgccgggaagtcgttcgcgctgcccccgggcgtcacggtt
tgcgactcgggccgcggaagcctcgtgttcggggatatggaaggtcagatctggtttttg
ccgcgctcgcttcaactcactagtttccaggcttacaaactaagagtaacgcacctgtac
cagctgaagcagcacagtatcttggtttctgttggtgaggatgaagagggtattaaccca
ttggttaaagtatggaacctggagaaacgagatggtggcaatcctctttgcacacgaatt
tttccggcaataccgggtaacaagcccacggttgtgtcttgcctaactgtccacgagaat
cttaatttcatggctattggttttgcagatgggagtgttgtacttacaaaaggagacatc
acccgagaccggcatagtaaaacccagatcctgcatgagggcagttatccagttactggt
cttgctttccgacagtctggcaaaacaacacatctgtttgtggtgaccacagagaacatc
cagtcttacctgctttcagtgaaagactatcctcatctggagctggacactcatggttgt
ggattgcgctgttcttctctcagtgacccctcacaggatctgcagttcattgtagcagga
aatgaatgtgtgtacctttatcagccagacgaacggggcccttgctttgccttcgaggga
caaaagttgattgttcactggtatcgggggtacctcatcattgtctccaaggaccggaag
acttctccaaagtctgagtttgctgggagtgaggcacagaattcagataaacaagtcctg
aatatttatgacttgtgcaacaagttcattgcatacagctcgatcttcgacgatatagta
gatgttttagcggagtggggttctttgtatgtactgaccagagatgggaagatccatgta
ctgcaggagaaggatacacaaaccaaacttgagatgctattcagaaagaacttatttgaa
atggccattaacctagccaagagtcaccacttggacagcgatggcttgtcagagatcttc
cgtcagtatggcgatcatctgtacaacaaggggaaccatgatggagccatccagcagtat
attcgaacaatagggaagttggaaccatcttatgttattcggaaatttctagatgctcag
cgcatccacaacctcactgcttatctgcagactcttcacttgcagtctctggccaatgca
gaccatactacgcttctgctgaattgctataccaaactcaaagacagctccaaactggag
gagttcattaagactagcgagagcgaggtccgctttgatgtggaaacagcaatcaaagtg
cttcgtcaagcaggttactactcccatgctgtgtacttggcagagaagcatgcccatcac
gagtggtacctcaaaatccagctggaggacatcaagaactaccaagaggctttacactac
attggaaaactgccgtttgatcaggcagagagtaacatgaagcggtatggtaaaatcctg
atgcaccatgtccctaatgagaccacagaactattgaagatcctttgcactgattaccag
ccatcaggagacagcgaaggccttgggctgctggaaggaaaaaaggctaattctgaggag
ttcattccggtctttgcaaacaactcccgagaactgaaagcttttctggagcacatgact
gaggtgcagtctgactctccacagggtgtctatgacactttattggaacttcgactccag
aactgggcccatgaacaagataagcagatgaaggaaaagctgcacaatgaagcactcact
ctcctgaagagtggaaggttcaaaacagtcttcgataaagccttggtcttatgtcagatg
cacaatttcaaggatggtgtcctctacctctatgaacagggcaaacttttccaacagatc
atgcactaccacatgcagaatgagcagtacaagaaggtgattgaggtgtgtgagttgtat
ggagaccaagaggcatgtctctgggaacaggctctcggctattttgcacggaaagaggag
gactgcaaggagtatattgctgcggtactgaaacacatagagaacaagaaccttatgcct
ccactgcttgttgtgcagacactggctcacaactccacagccacgctgtctgtgattaag
gattatcttgtcaacaagctgcagaagcagagctgccagatcgagcaggatgagcaaaga
attctaaaatacagagaagaaaccacaaggatccgccaggagattgaagagctaaaagca
agtcccaagatctttcagaagaccaagtgtagtatctgtaccagtgccctggagcttcct
tcagtccacttcttgtgtggtcattccttccaccagcattgctttgaaagctactctgac
agtgactcagaatgtcctacttgcatgcctgaaaaccgcaaagtgatggatatgatccga
gctcaggagcagaagagggatctgcacgatcagtttcagcatcagctcaagtgttccaat
gatggcttctctgtcgttgccgactacttcgggcgaggtgtcttcaacaagctcaccctc
atcacggacctgccaccggggaagccacccacgactctcgaggccggcctgcagcgggag
ctgctcctgcacaccaggcgcggcacctaa
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