Anser cygnoides (swan goose): 106039958
Help
Entry
106039958 CDS
T04896
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106039958 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acyg03041
]
106039958 (SF3B1)
03036 Chromosome and associated proteins [BR:
acyg03036
]
106039958 (SF3B1)
Spliceosome [BR:
acyg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106039958 (SF3B1)
Complex B
106039958 (SF3B1)
Complex C
U2 SnRNP specific factors
106039958 (SF3B1)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
106039958 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
106039958
NCBI-ProteinID:
XP_047914375
UniProt:
A0A8B9DW15
LinkDB
All DBs
Position
6:3107913..3130291
Genome browser
AA seq
1301 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGASSQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacccacgaagatattgaagcacaaattcgagaaattcaagga
aaaaagcctgctcttgatgaagcacaaggagtaggccttgattccacaggatattatgat
caagaaatctatggtggcagtgacagcaggtttgctggatatgtaacttctattgcagca
actgaattggaagatgatgatgatgactacccttctacaagcttgcttggccagaagaag
ccaggataccatgctccagtggcattgcttaatgacatcccgcagtcaactgaacagtat
gatccttttgcagaacaccgtccgcaaaagattgcagatcgggaagatgagtacaaaaag
cacaggcggatgatgataatttcccctgagcgtcttgatccttttgcagatggagggaag
acaccagatcctaaaatgaatgccagaacatacatggatgtcatgcgtgaacagcattta
acaaaagaagagagagaaattaggcagcagctagctgaaaaagctaaagctggagagctt
aaagtcgtcaatggagcctcatctcagccaccttcaaaacgcaagcggcgttgggatcag
acagctgatcagactcctggtgctacacctaaaaaattatccagttgggatcaagcagag
actcctggacatacaccatctctgcgctgggatgaaaccccaggccgcgcaaagggcagc
gaaactcctggtgccaccccaggctcaaaaatatgggatcctactcccagtcatacacca
gcaggggctgcaacacctggacgggacacacctggtcatgcaacaccaggccatggaggt
gccacttccagcgcacgtaaaaatcgatgggatgaaacacctaaaacagaaagagatact
ccaggacacggcagtggatgggctgagactcctcgtacagatagaggtggtgattccatt
ggtgagacaccaaccccaggagcaagtaaaagaaagtcacgatgggatgaaacacctgct
agccagatgggtggcagcactcctgtgctgacacctggcaaaacacccattggtacacca
gctatgaacatggcaactccgacaccaggtcatatcatgagcatgactcctgaacagctg
caggcttggcgttgggagagggaaattgatgagagaaatagaccactgtctgatgaggaa
ttggacgctatgttcccagaaggatataaggttcttcccccgccagctgggtatgtaccc
attcgcactccagcccgtaagcttacagcaactccaacgcctttgggtggtatgactgga
ttccacatgcaaacggaagaccgtactatgaagagcgtcaatgaccagccatctggcaat
cttcctttcctaaaaccagatgatatccaatactttgataaacttctggttgatgttgat
gagtcaactctgagtcctgaagaacagaaggagaggaagataatgaaattacttctgaaa
ataaagaatggcacgcctcccatgagaaaggctgctttgcgacaaattactgataaagct
cgggagtttggtgcaggaccattgtttaaccagattctgcctctgctgatgtcaccaacg
cttgaagatcaggagcgtcacttgcttgtcaaagtcatagacagaattctctacaaactg
gatgatttggtccgaccatatgtacacaagatccttgttgtcattgaaccactgctgatt
gatgaagactattatgccagagtggaaggcagagaaattatttcaaacttggcgaaggct
gctggtttggcaacaatgatctctacaatgcgtcctgatattgataacatggatgaatat
gtccgaaacacaacagctcgagcctttgctgttgttgcctctgctttgggcattccttct
ctgttaccgttcttgaaagctgtctgtaaaagcaaaaagtcctggcaggctaggcatact
ggcatcaagattgtgcagcaaattgctattcttatgggttgtgctatcttgcctcatctc
aggagcttggttgaaattattgaacatggtcttgtggatgaacagcagaaagttcgtacc
atcagtgctttggctattgctgctttggctgaggcagctactccctatggtattgaatca
tttgattctgttctgaagcctttatggaagggtatacgtcaacacagaggaaagggtttg
gctgcctttttgaaggctattggttatttgatcccacttatggatgctgagtatgcgaac
tattacaccagagaagtcatgctaattcttatcagagagttccagtctcctgatgaagag
atgaaaaaaattgtattgaaggtggtcaagcagtgttgtggtacggatggtgttgaagca
aactacattaaaacggagatcttgccaccatttttcaaacacttttggcagcacagaatg
gcattggacaggagaaattacagacagttggttgatacaacagtggagctggcaaataaa
gttggagcagctgaaattatttctagaattgtggatgatctgaaagatgaggctgagcag
tacagaaaaatggtcatggaaacaattgaaaagataatgggaaatctgggtgcggcagac
attgatcataaactggaagaacaacttattgatggtatcttgtacgcctttcaagaacag
accacagaggattctgtgatgctgaatggttttggcacagtggttaatgctctaggcaaa
agagttaagccctacttgccacaaatctgtggtactgttttgtggcgtttgaacaacaaa
tcggctaaagttcggcagcaggctgctgacctgatctctcgtactgcagttgtcatgaag
acttgtcaagaggaaaaactgatgggacatttgggagttgtgttgtatgagtacctgggt
gaagaatatcctgaagtattgggcagcatacttggagcgcttaaggctattgtgaatgtt
ataggtatgcacaagatgacaccacctatcaaagatctgctgccacggcttacgcctatt
ttgaagaacagacatgagaaagtacaggagaattgtattgatcttgttgggcgaattgca
gaccgaggtgcagaatatgtttccgcaagagaatggatgaggatctgctttgaactgctt
gaattattaaaagctcacaagaaggctattcgaagagccacagtaaacacttttggctat
attgcgaaagctattggacctcatgatgtattggctacactgctaaataacttgaaagta
caggaaagacagaacagagtatgtactacagtagcaattgctattgtagctgaaacatgc
tcccctttcacagtgctgcctgcactcatgaatgaatacagagttccagaactgaatgtc
cagaatggtgtgttaaaatctctttctttcctgtttgaatacattggagagatggggaaa
gattacatttatgctgttacaccattgcttgaggatgctttaatggacagggatcttgta
cacaggcagacagccagtgccgtggtgcagcacatgtctcttggtgtctatgggtttggc
tgtgaagattctcttaatcatttgttaaattacgtatggcctaatgtgtttgaaacctcc
ccacacgtcattcaggcagttatgggagctctggagggcctcagagttgctattggtccg
tgcagaatgttgcagtattgtttacagggtttgtttcaccctgcccggaaagtcagagat
gtctactggaagatttataattccatctatattggatcacaggatgctctgatagcacat
tatccaagaatctataatgatgaaaagaacacctacattcgttatgagcttgactacatc
ttataa
DBGET
integrated database retrieval system
