Anser cygnoides (swan goose): 106040135
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Entry
106040135 CDS
T04896
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03013
Nucleocytoplasmic transport
acyg03015
mRNA surveillance pathway
acyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106040135 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
106040135 (NCBP1)
03015 mRNA surveillance pathway
106040135 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106040135 (NCBP1)
03041 Spliceosome [BR:
acyg03041
]
106040135 (NCBP1)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
106040135 (NCBP1)
Spliceosome [BR:
acyg03041
]
Common components
Common spliceosomal components
Cap binding complex
106040135 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Motif
Other DBs
NCBI-GeneID:
106040135
NCBI-ProteinID:
XP_066844495
LinkDB
All DBs
Position
Z:complement(16707258..16739026)
Genome browser
AA seq
793 aa
AA seq
DB search
MSRRRHSDDSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLE
ADLPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKV
NMYNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLP
WVGKELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQK
LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP
EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAE
LFQLPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS
HHLSNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSP
ANPVCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGFT
FNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHP
QMIAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKE
LEETKARLARQHKRRDSDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRF
IMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHH
ILAVFQQFCALQA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacggcggcacagcgacgacagcgacgacagcgatgggcagccccacaagcgg
cggaggacgtcggagccgtccgagatcgaggagaggctggagtcgctcatctgcagggtg
ggggagaagagcaattcgtcattggagagcaacttggagggtctagcaggcgttttggaa
gctgatctgccaaattacaaaagcaagatactgaggattctgtgtactgttgcacgtctg
ttaccagaaaagcttactgtttacacaacactagttgggttgctgaatgccagaaactac
aactttggtggagaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtt
aatatgtacaatgaagctgtccacttagtccgttttctatctgaccttgtgaactgtcac
gtaatagccgcaccttcaatggtcgctatgtttgagaactttgtgagtgtgacacaggag
gaagacgtaccccaagtacgatgtgactggtacatgtttgcatttctgtcatctttgcct
tgggttggaaaggagttatatgagaaaaaagatgctgagatggatcgcctcttgtctcag
acagaaagctatctgaaacgccgccagaagattcatgtacccatgcttcaagtttggact
gctgataaaccacatccacaagaagagtatttagattgcctttggtctcagattcagaag
ttgaaaaaagaccgctggcaagagcgacacattctgaggccctacttggcttttgatagc
attctttgtgaagcactgcaacataatctgcctccgttcactcctccgcctcacactgaa
gattcagtgtatccgatgccaagggttatttttaggatgtttgactacacagatgaccct
gagggccctgtcatgcccggaagccactctgttgaacgatttgtaatagaagagaacctt
cattgcatcatcaaatcccactggaaagagagaaaaacttgtgctgcccagctgttgagc
tatccaggaaataacaagatccccttgaactaccacatagtcgaggtaatatttgcagaa
ttgtttcagcttccatctccaccacacattgaagtcatgtacacgacgctcctgattgaa
ctgtgcaaacttcagcctggttctttaccacaagtccttgcacaagccacagaaatgctc
tacatgcgtttggatacaatgaatacaacctgtgtagacagatttattaattggttttct
caccacttgagcaacttccagttccgttggagctgggaagattggtcagattgtcttact
caggaccttgaaaagcccaaacccaaatttgtgagagaggttttggaaaaatgcatgcga
ctctcctaccatcagcgaataatagacattgttcctgcaagcttttctgtcctcagtcct
gcaaatccagtgtgcatttacaaatacggagatgaaagcaataggtctcttcctggatat
actgtggcactctgtttaacaattgcaattaaaaacaaggccagtaatgatgaaatcttc
agcattttaaaggatgtgcctaatccaaaccaggatgatgatgatgatgaaggatttacc
ttcaaccctctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtct
ttcagccactccttcagtgccctggcaaagtttcacgaagtctttaaaacacttgctgaa
agtgatgagggaaaactccatgttctgagggttgtatatgaggtttggaagaatcaccca
cagatgattgctgtgcttgtggacaagatgattcggacacaaattgttgactgtgctgca
gtagcaaactggatcttctcctcggagcttgcacatgattttactaggttttatatctgg
gaaatcttacattccacaattcgtaagatgaataagcatgttttgaagattcataaggaa
ctggaggagactaaggcaagattggccagacagcacaaaagacgagacagtgacgacgat
gaccgaagcagtgatcgggaagatggacctctagaagagcagatagagcgtttgcaggag
aaagttgagtcagctcagagtgagcagaagaatctcttccttgttatattccagcgtttc
attatgttgttaactgagcacttagtgcgctgtgaaaccggtggaatcgatgtatttaca
ccttggtacaagagctgtatagagaggttgcagcagatcttcctacaacatcaccagata
atccagcagtacatggtgaccctagagaacctcctgtttacagctgaactggaccaccac
atactggctgtgtttcagcagttctgtgctctgcaggcctga
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