Anser cygnoides (swan goose): 106040205
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Entry
106040205 CDS
T04896
Symbol
APTX
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106040205 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106040205 (APTX)
Enzymes [BR:
acyg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
106040205 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
106040205 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
106040205 (APTX)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
106040205 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106040205 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
zf-C2H2_4
FHA
zf-C2H2_6
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
106040205
NCBI-ProteinID:
XP_066844785
UniProt:
A0A8B9E331
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All DBs
Position
Z:complement(16531710..16541474)
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AA seq
350 aa
AA seq
DB search
MRACWLVPREGRSRRIPLPHSAAVVVGRGPETGITDRRCSRRQVQLKADCNKGYVTVKQI
GVNPTSVDLVDVGKDEEVKMRPGQVLHIVNKLYPYTVQFAEESGKTVTEAEEKVQTEKRP
CEDSSENDDIENVPKKAKKMEAADTQGSSAELKLSKTSVSPHEGTSSKKEHLGHWSQGLK
SSMQDPKMQVYKDEKTVVIKDKYPKARYHWLILPWDSIPSLKAVTREHLGLLEHMHAVGE
KMIEQCPARGSLEFRLGYHAIPSMSHLHLHVISQDFDSAALKTKKHWNSFTTEYFLNSQD
VIEMVRSKGKVTVKDHASELLKLPLRCHLCKQQLSTIPQLKEHLRKHWPK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgtgctggctggtgccgagggagggccgcagccgtcggatcccgctgccgcac
tcggccgccgtggtggtggggcgcggcccggagacggggataacggacaggaggtgctcg
cggcggcaagttcagttaaaagccgactgtaacaaggggtatgtcacagttaaacagata
ggagtcaacccgactagtgttgatttagtggacgttggcaaggatgaagaggtgaaaatg
aggccaggccaagttctgcacattgtgaataaactttacccctacacggtgcaatttgct
gaagaatcggggaaaactgttacagaagcagaagagaaagtacaaactgaaaagaggcca
tgtgaggactcctccgagaacgatgatatagaaaacgtgcccaaaaaggcaaagaaaatg
gaggcggcggatacacaaggcagttctgcagagctcaagctaagcaagaccagtgtgtct
ccacatgaagggacttcgagcaaaaaggaacatttaggacactggagtcagggtctaaag
agttccatgcaagatccaaaaatgcaggtttacaaagacgagaagactgtagtcatcaaa
gacaaatatcctaaagcacgttaccactggcttattttaccgtgggactccattccaagc
ctgaaggcagtcaccagggagcatcttggactcctggaacacatgcatgcagttggggaa
aaaatgatcgagcagtgccctgctagaggcagtctggagttccgactgggttaccacgct
attcccagtatgagtcacctgcatttgcatgtaatcagccaggattttgattccgctgcc
ctgaaaaccaaaaagcactggaactcttttactacagaatacttcttaaactcccaagat
gtgatagagatggtaagaagcaagggaaaagtaacagtgaaagatcatgcctctgaactt
ctcaaattgcccctcagatgccatctttgcaaacaacagctatccactatcccacagcta
aaggagcacctcaggaaacactggccaaaatga
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