Anser cygnoides (swan goose): 106040293
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Entry
106040293 CDS
T04896
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106040293 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106040293 (ROBO1)
Cell adhesion molecules [BR:
acyg04515
]
Immunoglobulin superfamily
ROBO family
106040293 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
106040293
NCBI-ProteinID:
XP_047936805
LinkDB
All DBs
Position
1:complement(82952056..83656149)
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AA seq
1656 aa
AA seq
DB search
MKWKHYPFLVIVAACSLSRCHHLLGQLIPDSDDLERGNDSGTPLPTSDNADNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGTPLDDKDERITIRGGKLMITYTRKNDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKARYEIRDDHTLKIRKVMAGDMGSYTCIAENMVGKAEASATLTVQVVSEPPQFVVKP
RDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITN
VQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLNCV
ATGTLTPTILWKKDGILISTQDSRIKQLETGALQIRYAKLGDTGRYTCIASTPSGEATWS
AYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIE
AFSHASGSTWQTVAENVKTESFAVKGLKPNAIYLFLVRAANAYGLSDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPTPAS
YGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFNEFQGADSEVKFAKTLEEAPSA
PPQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVWCLGNESRYHINKTVDGSTFSV
VIPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGNPVSSEDQVSLAQQISDVVKQP
AFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGDAVS
SGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTSGNGNSDSNLTTYSRPADCIA
NYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVSQPGQPTPYATTQ
LIQSNISNNVNNGSGDMNEKHWKPSVQQKQEVAPIQYNIMEQNKLNKDYRVNDNIAPTIP
YNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQAGMNWADLLPPPPAHPPPHS
NSEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSH
QSTATLTPSPQEELQPMLQDCQEDLGHIQHQPDRRRQPVSPPPPPRPISPPHTYGYISGP
LVSDMDTDAPEEEEDEADIEVAKMQNRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSA
SEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGGRRHFHASH
CPRPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHLRREVYTDDLPPPPVPPPAIKSPTAQ
SKSQLEVRPVMLPKLASVEPRTDRSAERKGASYKGRDGVDGRQHSDVRTNSGERRESQEQ
QSDGKLRGNKTPKREGTPAKTHLLQEDILPYSRPTFPTSNNPRDPSSSSSMSSRGSGGRQ
RADQANIARRNVAEMQVLGAYEQGEEDDDEMEETES
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacattatccttttttggtcatagtagctgcatgcagcctttccagatgt
catcacttactgggtcagcttattccagactccgacgacctagagaggggaaacgacagt
gggacaccactccccacctctgataatgctgacaattcgctgggctacacaggttcccgt
cttcgtcaagaagattttccacctcgaattgttgaacacccttctgatttaattgtttca
aaaggagaaccagcaactttaaactgtaaagctgaaggaagaccaaccccaaccattgag
tggtataaaggtggggaaagagtggaaactgacaaggatgaccctcgttcccatcggatg
ctgctgcccagcggatctttatttttcttacgcatagttcatgggcgcaagagtaggccg
gatgaaggggtctatgtctgcgtggcaaggaattaccttggggaagctgtaagtcataat
gcatcgctggaagtggcaattctgcgtgatgacttcaggcaaaatccatcagatgtaatg
gtagccgtgggcgaacctgctgtgatggagtgtcagcctccaagaggtcacccagaaccc
actatatcatggaaaaaagatgggacccctctggatgacaaagatgagagaattacaatc
agaggaggaaagcttatgatcacatacacaagaaagaatgatgctggcaagtatgtttgt
gttggaacaaatatggttggagaacgtgaaagcgaagttgcagagctcactgttctagaa
agaccatcttttgtgaagagaccaagtaatctggctgtaactgtggatgatagtgctgag
tttaaatgtgaggcaagaggtgaccccgtccctacagtaagatggaggaaagatgacggg
gaattaccaaaagcaagatacgaaatccgtgatgatcataccttgaaaatacggaaagtt
atggcaggagacatgggctcatatacttgcattgcagaaaatatggttggaaaagctgaa
gcatcagcaactctaacagtgcaagttgtgtctgagcctccacagtttgttgtaaagccg
cgtgatcaggtagctgcactgggaagaacagtgactttccagtgtgaagcaactggaaac
cctcagccagccatcttttggcggagagagggaagtcagaaccttcttttctcataccag
ccccctcagtcatccagccgattttcagtttcccagacaggtgacctcaccatcaccaat
gtccagaggtcggatgttggctactatatctgccagacattaaatgttgcaggaagtatt
ataacaaaagcctacttggaagttactgatgtgattgcagaccggcctccccctgtcatt
cgacagggtcctgtgaatcagactgtagctgtagatggtactttagtactgaactgtgtg
gctacaggcactttaacgcccactatcctctggaaaaaggatgggatcctgatctctacc
caggactctcgcatcaagcagttggaaactggagcattgcagatcagatatgctaagcta
ggcgacaccggtcggtacacctgcattgcttcaacaccaagtggcgaagctacatggagt
gcttacatagaggtccaagaatttggagtcccagtgcagccaccaagacccactgaccca
aacttgattcctagtgctccatcaaaacctgaggttacagatgtcagcagaaatacagta
acattgtcatggcaaccaaatttgaattcaggtgcaactccaacctcttacataattgag
gccttcagccatgcatctggtagcacctggcaaactgtagctgaaaatgtgaaaacagag
agttttgcagttaaagggctaaaacctaatgcaatttatctattcctcgtgagggcagca
aatgcgtatggactaagtgacccaagccaaatatctgatccagtgaaaactcaagatgtt
ccaccaacaagtcagggtgtggatcacaagcaggtccagagagaactaggtgatgtggta
ctacatctgcacaaccctactatcctttcttcttcctcaattgaagttcattggactgtg
gaccaacaatcccagtatattcaaggatataaaatcttgtaccggcctacaccagcatcc
tatggagagtcagagtggttaatttttgaagtgaggactccaaccaaaaacagtgttatc
attccagagctgaagaaaggtgtaaactatgaaattaaggcccgccccttttttaatgag
tttcaaggagcagatagtgaagtgaaatttgcaaaaaccctagaagaagcgcccagtgct
ccacctcagagtgtttcggtaactaaaaatgatgggaacgggactgcaattgtggtcacc
tggcagccaccccccgaggataaccagaacggaatggttcaagaatataaggtttggtgt
cttggcaatgaaagtcgataccatataaacaaaacggtagatggttccaccttttctgta
gtcatcccctccctcgttcctggtattcgatacagcgtggaagtggcagcaagtactggg
gcaggacctggagtgaaaagtgatccgcagtttatccaattagattctcatggaaaccct
gtgtcttcagaagatcaagtcagtttagcccagcagatttctgatgtagtaaaacagcct
gcctttattgctggaattggtgcagcctgttggattattctcatggtcttcagcatctgg
ttatatcgccacaggaagaagcgaaatggactcactagtacttacgctggtatcagaaaa
gtcccgtcttttaccttcacaccaacagtaacctatcagaggggaggagatgccgtaagc
agtggaggcaggccaggtctcctaaacatcagtgaaccagccacgcagccatggctagca
gatacttggcctaacacagggaacaaccacaatgactgctccatcaactgctgcacctct
ggcaatggaaacagtgatagcaaccttacaacatacagtcgaccagccgattgtatagca
aattacaacaatcagctggacaacaagcaaacaaacctgatgttgcctgagtcaactgta
tatggtgatgtggacctaagcaacaaaatcaatgagatgaaaaccttcaatagtccaaat
ctaaaggatggaagatttgtcagccaacctgggcagcccactccatatgccaccactcaa
ctcatccagtcaaatatcagcaataatgttaacaatggcagcggggatatgaatgagaaa
cactggaaaccctctgttcagcaaaagcaagaggttgcacccatacagtacaacattatg
gagcaaaacaaattaaacaaagattaccgggtaaatgacaacattgctccaacaattcca
tacaaccagtcatatgaccagaatacaggtggatcctacaacagctcggatagaggcagt
agtacatctgggagtcaagggcacaagaagggtgctcggactccaaaggctcccaagcaa
gctggcatgaactgggcagatcttcttccacctcctccagcacatccacctccccacagc
aatagtgaagattacagtctttcagtggatgaaagctatgaccaagaaattccttgtcca
gtcccacctgcgaggatgtatctgcagcaggatgagctagaggaagaggaagatgagcga
ggtcctactccacctgttcgaggagctgcttcctctccagccgctgtctcctatagccat
cagtcaactgccactctcactccctctccccaggaagaactccagcccatgttacaggac
tgtcaggaggatctgggacacatacaacaccagcctgaccggagacgtcagcctgtgagt
cctccaccccctccaaggcccatctctccaccacatacctatggatatatctcagggccc
ttggtctctgatatggatactgatgcaccagaagaggaagaggatgaggcagatatagag
gttgccaagatgcagaacaggagactccttttgcgtggccttgagcagacacctgcctca
agtgttggggatctggagagctctgtaacagggtccatgatcaatggctggggttcagct
tctgaagaagataacatctcaagtgggcggtctagcgttagctcttcagatggatcattt
tttactgatgcagattttgcacaggctgttgcagcagctgcagaatacgctggcctgaaa
gtagccagacgtcaaatgcaggatgctgcaggaggccgtagacattttcatgcatcacac
tgtcctagaccaaccagccctgtgtctactgacagcaatatgagtgctgttgtaatacag
aaggtccgacctgccaaaaagcaaaagcaccagccaggacatctgcgcagagaagtctac
acagatgacttgccaccccctcctgtgccacctccagctataaaatcaccaactgctcag
tccaaatcacagctggaggtgcggcctgtcatgttgccaaaactggcttctgtagaaccg
aggacagacagatctgcagaaaggaaaggagcaagctacaaggggagggacggggtggat
gggagacagcattcagatgtgcggacaaattcaggagagcggagagaatcacaggaacag
caaagtgatgggaaactgcgaggaaataaaacaccaaaacgagaaggcacaccagcaaaa
actcatcttcttcaagaggacatcctgccatattctagaccaacatttccaacatcaaat
aatcctagagatcctagctcctccagctctatgtcttcaagaggatcaggaggtagacag
agggcagatcaagcaaatatagcccgaaggaatgttgcagaaatgcaagtactgggagca
tatgaacaaggagaagaagacgacgacgagatggaggaaacagaaagctga
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integrated database retrieval system