KEGG   Anser cygnoides (swan goose): 106040301
Entry
106040301         CDS       T04896                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
acyg  Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:acyg01009]
    106040301 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acyg04121]
    106040301 (TRIM42)
Protein phosphatases and associated proteins [BR:acyg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106040301 (TRIM42)
Ubiquitin system [BR:acyg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    106040301 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Ig_J_second AbiGii_2
Other DBs
NCBI-GeneID: 106040301
NCBI-ProteinID: XP_013043552
LinkDB
Position
9:complement(7138357..7147008)
AA seq 774 aa
MTCCHSTDPDPPVTACAFLELYCCSLQRSLKGQWIFFQVSDKGMDENGCTFSICPCFSNC
FYLTCHSRKKECCLCWRFLFTSEQNCTCFPCPYEEDKPYQCCHCSCAEHANCWWCCCSCS
NNPDCKCCCCGGENSACQYYASKCCRNPIYEQSRSSATVQSKDVMSRFRTRNNAFVSIPE
RNSSNHAFRDQLACPLCKQLFLQPFMLPCNHCICEKCITKSKTKAEATDNFYIIVCPVCS
KAHCLPYTNKIQLRKNYLRAKLAKKYMRRHGILRWRFDHSERPVHCEICRERRRMATKRC
KTCGINMCNECLHLYHSENGAQDHIFTKAYQEDNEQWPCLLHCNSHLSEYCLDDHKLICG
FCKNSLHNDHETIPLAVACSKEAASLSSTIVKFKRARQGVDNDLMEIILLKNNFQTYKDA
KRKEIRNGFLRLRMVLHEQEKEMMELLENTELKKQKEISEYVNYTSSQLSYMDGLIQYAE
EALKEESQIVFLQSAHCLVKEIEDAIPSIFHPSPLLREDPLRKLQLNFDELLAILQGLVP
SLSGIKQSDSKAEKNPYIFNPEIMLPRHVSSTHEDKQTTLLQSTSLNSVFESGTMIKNTP
GRRPSSMPPHHSTQSNNMCAFWDAACETPIKERKYQFVNLPSPEPIEKLSVPVPGHVVIY
QTVVYPRSAKIYWTCPIEDVDFFEVEFYEVVGIGSDNIVQTQLDGQLSKIQQQNLEIRNL
DPNTEYLFKVRAVNKSGEGEWSEICKITTSDEHRIIQDRWGIQKSMQGALHTTK
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgacgtgttgccacagcacagaccctgacccaccagtcacagcttgtgcctttttggag
ctctattgctgtagtttgcagagaagcttaaagggtcaatggatttttttccaagtgtct
gataaagggatggatgaaaatggatgtaccttttcaatttgcccttgcttctcaaattgc
ttttacctgacttgccacagcagaaagaaagaatgctgcttatgttggcgcttcctattt
accagcgagcagaactgcacctgtttcccatgtccatatgaagaagacaaaccttatcag
tgctgccactgctcatgtgcagagcacgcaaattgctggtggtgctgctgctcttgttca
aataacccagactgcaaatgctgctgctgcggtggagagaattcagcatgtcagtactat
gcaagcaaatgctgcagaaaccccatctacgaacagtcaagatcatcagcaactgttcag
tcaaaagatgtcatgtcaagatttagaactaggaataatgcatttgtcagtataccagaa
aggaattcctctaaccatgccttccgtgaccagcttgcctgtccgctgtgtaagcagttg
tttctccagccatttatgctgccatgcaatcactgcatttgtgagaagtgtataactaaa
agcaagaccaaagctgaagcaacagacaacttttatatcattgtatgcccagtatgtagt
aaagcacattgtcttccctacactaacaaaattcagctgaggaagaattacctcagagca
aaactagccaagaaatacatgcgcagacacggcattctgaggtggagatttgaccacagt
gaaagaccagtccactgtgaaatctgcagggagagaagaagaatggcaaccaaaagatgt
aaaacatgcggaattaacatgtgcaatgaatgtctgcatttataccatagtgagaatggt
gctcaagaccacattttcaccaaagcataccaagaagataatgaacagtggccctgcctg
ctacactgcaactcacacctctccgaatactgtctggatgaccacaaactgatctgtggg
ttctgcaagaactcactgcacaacgatcacgagactattcccttggcagtcgcatgttca
aaagaggccgcttccctctccagcacaattgtaaaatttaaacgagcacgccaaggggtt
gataatgatctaatggaaattatcctgttaaaaaataatttccagacctacaaggacgcc
aaaaggaaggagatcagaaatggattcttaagattacgtatggttcttcatgaacaagaa
aaagagatgatggagttgcttgagaacactgaacttaaaaaacagaaagaaatttcagaa
tatgtaaactatacgtccagtcagctctcatatatggatggccttattcagtatgctgaa
gaggctcttaaggaggaaagtcaaattgtgtttctacaatctgcacactgcttggtgaaa
gaaatagaagacgcaattccttccattttccatcctagtccacttctcagagaagatcct
ttaagaaaacttcaactcaactttgatgaacttttggccattttacagggacttgtccca
tcccttagtggaataaaacaatcagacagtaaggcagaaaagaatccctatatttttaac
ccagaaataatgcttccaaggcatgtttcaagcactcacgaagacaaacaaacaacattg
ctccaaagcacatctttaaattctgtgtttgaatcaggcacgatgattaagaacactcct
ggaagacgaccaagctctatgcctccccatcattctacacagagtaataacatgtgtgca
ttttgggatgcagcttgtgaaactccaataaaagaaagaaaataccagtttgttaacctt
ccaagtccagaacctatagaaaaattatcagtcccagtgccaggacacgttgttatatac
cagactgttgtctacccaaggtctgccaaaatttactggacttgtccaatagaagatgta
gatttctttgaggtagagttttatgaagttgttggcattggttctgataacattgtccag
acacaactagatggccagctaagcaaaatacaacagcagaaccttgagatacgtaatctt
gatccaaatacagaatacctttttaaagtccgtgctgtcaataaaagtggtgaaggagaa
tggagtgaaatctgtaagataaccacttcagatgaacacagaataattcaagacagatgg
gggattcagaagagtatgcagggtgctctgcatacaacgaaatga

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