Anser cygnoides (swan goose): 106040377
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Entry
106040377 CDS
T04896
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acyg03037
]
106040377 (IFT88)
Cilium and associated proteins [BR:
acyg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
106040377 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_8
TPR_7
TPR_14
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_17
ARM_TT21_4th
TPR_10
TPR_9
TPR_CcmH_CycH
ARM_TT21_5th
TPR_15
HEAT_Nup120
TPR_21
ARM_TT21_C
DUF6584
HAT_PRP39_C
DUF2989
FumaraseC_C
Coatomer_E
ARM_TT21_2nd
GnHR_trans
Motif
Other DBs
NCBI-GeneID:
106040377
NCBI-ProteinID:
XP_066845875
LinkDB
All DBs
Position
1:complement(193323738..193375497)
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AA seq
865 aa
AA seq
DB search
MRPALVSWQPGAGHQGIAAAPVTRATRAGGLGPGLRIGPGLTAAGEKMMQNVHLAPEEDE
DDLYSGYNDYNPTFDTEDLENDIGFQQAARTSHGRRPPVTAKIPGTSASRPLGTAFGSKA
TLTSSMGRPMTGAIQDGVSRPMTAVHAAGYTKAAMRGSLFDPLGQARGPAPPLEMKNPDS
SEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERVLVRQREQISTPENINL
DLTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFSNGGRLKVNMGNIYLKQRNYSKAI
KFYRMALDQIPSVHKEMRINIMQNIGVAFIKTGQYIDAISSFEHIMSMSPNLKAGFNLIL
CYFAIGDSEQMKKAFQKLIAVPLEVDYDDKYISTNDDPHTNLLIEAIKNDSLRQIERERK
SMAEEYIMTAAKLIAPVIETSFAVGYDWCVEVVKASHYVELANDLEINKATTYLRQQDFN
QALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQASNYADLAVNSDRYNPAALTNKGN
TVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLSRIDEALDCFLKLHAILRNSA
QVLHQIANIYEMMDDPNQAIEWLMQLISVVPTDPHVLSKLGKLYDNEGDKSQAFHYYYES
YRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQK
ALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYMTKLKKVEKLKEIREQRIKSGRD
GSARSRKEGNAGGDTGGTKGEKLSAKLKALPGTSEPYESSSSKEIDASYVDPLGPQAERP
KTAARKRTEEDDFADEELGEDLLPE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgctctggtctcctggcaaccgggcgcggggcatcaggggatcgcggctgca
cccgtcacccgggcaacgcgggcagggggcctggggcccgggctcaggatcgggcccggg
cttaccgcagcaggagaaaaaatgatgcaaaacgtgcacctggctcctgaggaagatgaa
gatgatctttattctggctacaatgattataatcccacttttgacacagaggatttagaa
aatgatataggttttcaacaggcagcaagaacaagtcatgggagaagaccccctgtgaca
gccaaaattcccggtacatcagcttcgagacctttaggtactgcatttgggtcaaaggca
actttaacttcatctatgggaagaccaatgacaggagctatacaggatggggtttctcga
cccatgacagcagtgcatgctgcaggttacactaaggcagctatgagaggttctttattt
gatcctcttggccaagcaagaggtcccgctccacctttggaaatgaaaaatccagacagt
tcagaagagaagattaggcagttagaaaaaaaagtgaatgaactggttgaagaaagttgc
attgccaacagctgtggagacttgaaattggctctggaaaaagcaaaagaagctggaaga
aaggaaagagtattggtgagacaacgtgaacaaatttctactccagaaaacatcaactta
gatctcacatactcagttcttttcaatctggctagtcagtatgctgctaatgaaatgtat
gctgaagcactgaatacttatcaagttatagtgaagaataagatgttcagcaatggaggt
agactgaaggtcaatatgggaaatatatatttaaaacaacgaaactattccaaagctatc
aaattctaccgtatggctctagaccagattcctagtgtccacaaagagatgaggattaat
ataatgcaaaatattggagttgcatttattaaaactggccaatacattgatgccatttct
tcctttgaacatataatgagcatgtccccaaatctgaaggcaggcttcaacttgatccta
tgttattttgctattggagacagtgaacaaatgaaaaaagcattccaaaaactgattgca
gttcccttggaagtggattatgatgacaaatacatttcaacaaatgatgatccacatact
aatctactgattgaagccattaaaaatgacagtttaagacaaatagaacgtgagaggaaa
tccatggcagaggaatacatcatgacagctgctaaactgattgcaccagtaattgaaaca
tcttttgctgttggctatgactggtgtgttgaagtagtgaaagcttcccactatgtagag
ttagccaatgacctggaaataaataaagccactacttatttgaggcaacaggattttaac
caggcattggagactttaaaaatgtttgaaaaaaaggatagcagagtaaagagcgcagct
gcaacaaacctttcattcctttattatttggagaatgaattggcacaagcatctaactat
gcagatttagctgtaaattctgataggtacaatccagcagctctaactaacaaaggaaat
actgtttttgcaaatggagactatgaaaaagcagctgagttttataaggaagctctcagg
aatgattcctcttgcactgaagcactttataatcttggtctaacatacaagaagttaagc
agaatagacgaagctttggattgttttctgaaactccatgcgatccttcgaaatagtgcc
caagtccttcaccaaatagcaaacatatatgaaatgatggacgatcccaatcaagccata
gagtggcttatgcagctgatcagtgtagtaccaactgaccctcatgtcctttcaaagcta
gggaaattatatgacaatgaaggtgataaatctcaagcttttcattattactacgagtcg
taccggtatttcccttcaaacattgaggtcattgaatggcttggagcctattacattgac
acccagttttgtgaaaaagccattgagtactttgaaagagcagcacttatcctacctaca
caagtgaagtggcagctgatggttgccagttgctatcgaagaagtggtaattaccagaaa
gctctagagaaatacaaagtcattcacagaaaattcccagagaatgtcgaatgcctccga
tttttagttcgtctctgcacagatatgggactgaaagaagtccaagaatatatgacaaag
ctcaaaaaagtggaaaagttaaaagaaataagagagcagcgcattaagtctggcagagat
ggcagtgcacgtagccgcaaagaaggaaatgctggtggcgatactggtggtaccaaaggg
gaaaaactgagtgccaaactaaaagctttgcctggaacaagtgaaccttatgaaagtagc
agcagtaaagaaatagatgcctcctacgtagatccacttggcccacaagcagaaagaccg
aaaactgcagcaagaaagagaactgaggaagatgactttgctgatgaagaactaggagag
gatttgcttccagaataa
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