Anser cygnoides (swan goose): 106040397
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Entry
106040397 CDS
T04896
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106040397 (ZC3H12C)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106040397 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
106040397
NCBI-ProteinID:
XP_013043653
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All DBs
Position
1:complement(194251790..194302235)
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AA seq
919 aa
AA seq
DB search
MGRKLSFVPTLPQTPFAVLAKELFRLCSSTCKAKDSEEYGTLYIQEYKKNSKVESSTCSS
FMGLKDHLGHDLGHLYVGSTGTQINAIVPWSMAEKPTMDKVNSRKEDVDKEASEETSGSS
SCDSEESTNSDNDSEKLNNSASESHLLPKTHRQLCRSPCLEPHILKRNEILQDFRIEEAQ
IVPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKT
ETDQSVTNANTSVMREASSIESQRSESPLQEDVTEDGDNLRPIVIDGSNVAMSHGNKEVF
SCRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRR
VQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFM
PPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVAD
ELRAMSRSTAAKTTSEGGLVKSNSVPCSTKNDGTSELKRAAPKRQSDPSIRTQVYQDLEE
KLPTKNKLETRSVPSLVSIPSSSAAKPQSTAPLTNGLPSGVHFPPQDQRPQGQYPPTVMM
ATKNHGTPMPYDQYPKCESPVDVGYYSMLNAYSNLSISGPRSPERRFSLDTDYRISSVAS
DCSSEGSVSCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHPHGRLNSQPFLQSYHEPL
TRVQSYSHEEPKHHHKPPVPYMAVHLQHPAVGARSSCPNDYPASQSSPHSKTMHLGRALV
STRIDSISDSRLYDNSPLRHRKPFSGQDGLGSWDRQSYGVDAYGYRQTYSLPSNPTQPCY
EQFAFQSLPEQQEQTWRVPYCGIPQDPPRHQDTREKVYINLCNIFPPDLVRIVMKKNPHV
TDAQQLAAAILVEKSQLGY
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaaactgagctttgtaccaactctgccacagactccgtttgcggtccttgcc
aaagagctcttccgtctctgctcctccacctgtaaagccaaggacagtgaggaatacgga
acactttatattcaggaatacaagaaaaacagcaaagtggagtcaagtacatgcagcagc
ttcatgggcttgaaggatcacctggggcatgacttaggccatctttatgtggggagcact
ggcacacaaataaatgcaattgtaccttggtcgatggcggagaagccgacgatggataag
gttaattctaggaaagaagatgtagacaaggaggcatctgaagagacttcaggaagctcc
agttgtgactctgaagaaagcacaaattccgataatgattcagagaaactgaataattct
gcatcagaatcacatttattgcctaagactcaccgacagctgtgccgatctccttgctta
gagcctcatattctaaaaagaaatgagatcttgcaagactttaggatagaagaggctcag
atagtaccgaaggaagtcaaaaagccccctgatgtggtgaaagaatatcaaaccaaactg
gagtttgcacttaagttgggttactctgaagagcaggttcaacttgtactaaataaactt
ggtactgatgctttaataaacgatattttgggagaacttgtcaaacttgggaataaaact
gagactgatcagtctgtaactaatgctaacactagtgtaatgcgtgaagcgtcttccata
gagtctcagaggtcagaatctccgctgcaggaggatgtgacggaggatggtgacaacctg
aggccaatagttattgatggcagcaatgttgcaatgagccacgggaataaagaagtattt
tcttgtcgaggaatcaaattggcagtagactggtttttggaaagaggccataaggatgtt
acagtgtttgtgccagcatggaggaaagaacagtcaagacccgatgctctcatcacagat
caagagatcttgcgtaaattagaaaaagagaagattcttgtgttcacaccgtcccgccga
gtgcaagggagaagggtggtatgctacgatgaccggttcatagtgaagctggcctttgag
tcagatggcatcattgtttctaatgacaactacagggatctagctaatgagaagcccgaa
tggaagaagttcatagatgaacgcttgctgatgtattcatttgttaatgacaaatttatg
cctcctgatgatcctcttggccgccatggcccaagtctggacaattttcttaggaagaag
cctattgtgccagaacataagaagcaaccttgtccatatgggaagaaatgtacctatgga
cacaagtgcaaatactatcatccagaaagaggaaatcagcctcagcgatctgtagctgat
gagcttcgtgccatgtctagaagcacagctgccaaaactacaagtgaaggaggactggta
aaaagcaatagtgttccctgtagtactaagaatgatggcacttctgaacttaagcgtgcc
gctccgaaaaggcaatcggatcctagtataaggactcaagtctatcaagacttggaggaa
aagcttcccaccaaaaacaaattggaaaccaggtctgtaccttccttagttagcatacca
agttcctctgctgcaaaaccccaaagtactgcacctttaaccaacggccttccatccgga
gtccatttcccacctcaggatcaaagaccacagggacaatatcctcctacagtgatgatg
gcaaccaaaaatcacggaacgccaatgccttacgaccagtatcccaaatgtgagtctccc
gtggatgtagggtattactctatgctgaatgcgtattcaaatctgagtatatctggtcca
cgtagtcccgaaaggcgcttctccttggacacagattataggatcagctctgtggcttct
gactgcagcagtgaagggagcgttagttgtggcagcagtgattcctacgtgggttacagc
gaccgctcctacatgagttcgcctgacccgcagctggaggagaacttgaagtgccagcac
atgcacccccacggccgccttaactctcagcccttcttacagagctaccacgagcctcta
acacgagtgcagagttacagtcacgaagaaccaaagcatcaccacaaacctccagttccg
tacatggctgtgcatctgcagcatccagcagtcggtgctcgttctagttgcccaaacgac
tacccagcgtctcagagctcgccgcactcaaagaccatgcacctgggcagagccctcgtg
tccaccagaatcgacagcatttcggactcgcgcttgtacgataattctccactgagacac
aggaagcctttttctggccaagacgggcttggaagctgggacaggcagagttacggggtc
gatgcctacggctaccgtcagacctactccttgcccagtaaccccacgcagccgtgctac
gagcagtttgccttccaaagcctgcccgaacagcaggagcagacctggcgcgtaccttac
tgtggaatccctcaagaccccccgaggcaccaagacaccagggagaaggtttacataaac
ctgtgcaacatcttcccccccgatcttgtgaggattgtcatgaaaaaaaaccctcacgtg
acggacgcgcagcagctcgccgcagccatcttagtggagaaatctcagctaggttattga
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