Anser cygnoides (swan goose): 106040434
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Entry
106040434 CDS
T04896
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg02010
ABC transporters
acyg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106040434 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106040434 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acyg02000
]
106040434 (ABCA1)
Transporters [BR:
acyg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106040434 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
106040434
NCBI-ProteinID:
XP_047907434
LinkDB
All DBs
Position
Z:complement(33133833..33226769)
Genome browser
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGSDLKLRDFLVDNETFSDFLYHNVSMPSSAVEELLNAEVKL
QQVIVSGYRMRLRDLCNSSMLSEFLTIQNQSVAMDSEAFICALPKEKLLAAEQAFRANLN
PLKPLQRHISFNSSLWDLSETVEALKESLGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEDDVTNFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKVLYTPDTPAIRKVMTEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDIARFLSKHPEEFETDNG
SVYTWMDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIVFT
EIAPNSTELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVF
VFLSIFAIVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEQQDRQPLHPDQKGPSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKQVKEEMEQMAMDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDCGVDAE
TSDGTLPARRNRRAFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLSQQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTQRLLDALLNKPGFGTRCMQGHSIPDTPCTVGQTEWTTA
SVPESVLDTLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNL
TGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVKK
ILELAQGSSGDRFLNSLASFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQ
GKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVNRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQEVHQNMGYCPQFDAINELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFG
HAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggctttttggacgcagctgggattgctgctatggaagaacttcacctataggagaaga
cagactttccagctgctgatcgaagttgcttggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgaacagcatgaatgtcacttcccaaacaaagct
atgccttcagctggaaccttgccttggatacaggggatcatttgcaacgccaacaaccct
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcagatgccaagaggttactcttgtacagccaacaggacacg
agcataaaggatgtccagaaggtcttgggaaaactgcggaagttgggaaactcctctggg
tcagacttgaaacttcgggatttcctggttgacaacgagacattctcagacttcctctat
cataatgtgtccatgccatcatctgcagtagaggagctactgaacgcagaggtcaagctc
cagcaggtcatagtgtctggttaccgaatgcggctgcgagatctctgcaatagctcaatg
ctgtctgaatttcttacaatccaaaatcagtcagtggccatggactctgaggccttcatt
tgcgccttaccaaaggaaaaactccttgcagccgaacaagccttccgtgctaacctgaat
cctttgaagcctcttcagagacacatttcttttaattcttccttgtgggatctgtcagaa
actgtggaggctttgaaagagagcctgggaaagctcgttaaagagttgctgagcatgaag
agctggagcgacatgaggcaagaggtgatgttcttgaccaatgtgaatgcatcaaactcc
tctacacagatctaccaggctgtgtcacgtattgtgtgtggccatcccgaaggtggaggg
ctcaaaatcaaatccctcaactggtatgaggacaacaattacaaagcactgttcggaggc
aacaacactgaagatgatgtaaccaacttctatgataactccacaacaccctactgcaat
gagctgatgaagaacctggaatccagcccgctttccagaattatttggagggctttgaaa
cccttgctgattgggaaggtcttgtacactccagacacaccagccataaggaaggtcatg
actgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcggggggatgtgg
gaggagataagcccgaagatctggacgtttatggaaagcagtcaggaaatggatctgatt
cggacgctgctgaaaggcaaagctctctgggacctgcacttgccagcttccaactggacg
gtggaggacattgcccgcttcctctcaaagcatccggaggagtttgagacagataacggg
tcggtgtacacctggatggatgccttcaatgagacagacagggctattcagaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtccgtctt
ataaacaagtccttggagcttctggatgaaaggaggttctgggctggtattgtcttcact
gaaatagctcctaacagcacagagctccctcaacatgtgaaatacaagatacggatggac
attgacaacgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtttggggtggctttgcctacctgcaggatgtt
gtagaacaggccatcatcagggtgcaaacaggcacagagaagaagacgggagtttatgtg
cagcagatgccctacccgtgttatgtggatgacatatttctgcgcgtcatgagtcgctcc
atgcctctcttcatgactctagcctggatctactcagtggctgtgataattaagggcatc
gtgtatgagaaggaagcccggctgaaggagacaatgaggattatgggccttgacaatggc
atcctttggctaagctggttcattagcagcctcattcctctcctgatgagtgcaggtctg
ctggtgctgatcctcaagatggggaatctgctaccttatagcgacccgagtgtggtgttt
gttttcctctcgatcttcgccattgtgaccatcctccagtgcttcctcatcagtaccgtg
ttctccagggccaacctggcagctgcctgtgggggtattgtgtatttcacactgtaccta
ccctatgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatctttgcg
agcctgttgtctccagtagcttttggctttggctgcgagtactttgcactgtttgaagag
cagggagtcggtgttcaatgggacaacttctttgagagcccactggaagaagatggcttt
agcatcaccacatctgccgtcatgatgttgtttgacacgttcctgtatggagtcatgacc
tggtacatcgagtctgtcttcccaggccagtatggaattcccagaccctggtactttcct
ttcacaaagtcctattggtttggtgaagaacaacaggacaggcagccccttcatcctgac
cagaaggggccttcagaagtctgcaaggaggaagagcctgtgcatctgagccttggtgtt
tccatccagaacctggtaaaggtttatcgtgatggcaagaaagttgctgtagatggtctc
acactgaacttctatgaagggcagatcacatcctttctgggacacaatggagcaggaaaa
accactaccatgtccatcttgactggcttgttccctccaacctcgggcactgctttcatc
ctgggcaaagacatccgctccgagctcagcaccatcaggcaaaacctgggtgtctgtcca
cagcacaatgtgctgtttgacttgctcactgtggaggagcacatctggttctatgctcgg
ctcaaagggctgccggaaaagcaggtgaaagaggaaatggagcagatggcaatggatgtt
ggtttgcctcacaaactgaaagccaggacaagcaaactctctggtggcatgcagaggaag
ctctcagttgccttagcctttgtgggtggctccaaggttgtcattctggatgaacccaca
gctggggtggatccttattcccgcagagggatatgggaactgcttctgaaatatcggcaa
ggccgtactatcattctctccacacaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggttcttctctcttcctgaagaac
cagctgggaacaggctattacttgactctggtcaagaaggatgtggattcctctctgagc
tcctgtcgaaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacaccttgacaatagatgtg
tctgcaatttcaaatctcattacaaaacatgttcctgaggccaggctggtggaggacatt
ggccatgagttaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgagattgatgaccgtctctccgaccttggcatttccagctatggtatttct
gaaactaccctggaggagatcttcctcaaagtggctgatgattgtggtgtggacgcagaa
acctcagatgggacgctgccagccagaagaaacaggcgtgcgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgaccctaatgattcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccagatg
aagggctggaagctctcccagcagcagttcgtggctctgttgtggaagaggctgcttatt
gccaagcgaagccggaaaggcttcttcgctcagattgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgatcgttcctccctttgggaagtatcccagcctagaattg
cagccctggatgtacgatgagcagtatacttttattagcaatgatgctccagaagacgca
ggcactcagaggcttttggatgcccttctcaataagcctggctttgggacacgctgtatg
caaggacactccatcccagacactccttgcaccgtggggcagacggaatggaccactgct
tcagtcccagagtcagtcctggacaccttgaaaggcaactggagcatggagaacccttca
ccgtcatgcgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgtccccctggt
gcaggcgggctgccacccccacagcgagaacaagacactgctgatatcctccagaatctg
acaggccgcaatatatcagactatctagtgaagacctacgcgcagatcattggaaaaagc
ttaaagaataagatctgggtgaatgagttcagatatggtggcttttctctgggagccagc
agttccctcatgcttcctccaagccatgaagtcactgatgccattaagcaggtgaagaaa
atcttggagctagcgcaggggagttctggagatcgatttctcaacagcttggcaagtttc
atgaaaggcctggatacaaagaacaacgtgaaggtgtggttcaacaacaagggctggcat
gccattgcctccttcctaaatgtgatcaacaatgccatccttcgggccaacctgcagcag
ggcaaaaaccctagtgcttatgggatcactgccttcaatcacccactcaacctcaccaag
cagcagctctctgaagtggctctgatgaccacctctgtggatgtcctagtctccatctgt
gtgatctttgccatgtcctttgttcctgccagctttgtggtcttccttatccaggaacgc
gtcagcaaggctaagcacttgcagttcatcagtggtgtgaagcctgtgatctactggctg
gccaactttgtctgggatatgtgcaactacattgttccagccacgctagtcatcatcatc
ttcatctgcttccagcagaaatcatatgtatcctcctccaacttgcctgtgctggctctt
cttctgcttctctatgggtggtctatcacccctctcatgtatccagcctcctttgtgttc
aaaatccccagcacagcatacgttgtgctgactagtgtgaacctcttcattggcatcaat
ggtagcgtggccacctttgtcctggagctcttcaccaacaataagctgaacaacatcaat
gacatcctgaagtccgtcttcctcatcttcccccacttctgcctggggcggggacttatc
gacatggtgaaaaaccaggccatggctgatgctctggagaggtttggtgagaatcgcttt
gtgtcccctctgtcgtgggacttggtgggaagaaacctctttgccatggccgtggagggt
gtagtgttcttcctcatcaccgtgctcatccaatacaggttcttcatcaaacccaggcct
gtctatgccaagctgcctcctgtgaatgatgaagatgaagatgtaaacagagagagacag
agaataattagtggaggaggacagagtgacatcctagaaatcaaggagctgaccaagatt
tacaggatgaagcgaaagccagcagttgacagaatctgtgttggaatcccccctggagag
tgctttgggctcctgggagtaaatggtgcaggcaaatcatccactttcaagatgctaact
ggtgatacagatgtgacaggaggagaagctttcctcaaagggaacagtattctgtccaac
atccaagaagtccatcagaacatgggatactgcccgcagtttgatgctattaatgagctg
ctgacagggcgagagcacttggagttctttgcgctcctcagaggtgttccagagaaagaa
gtctgcaaggttggtgaatgggcaattcgaaaactgggccttgtgaaatatggagaaaaa
tatgcaggcaattacagtggagggaacaggcgcaagctctccacagcaattgcactcatt
ggagggccacctgtggtattcctggatgagccaacaacagggatggatcccaaagcacgt
cgtttcctgtggaactgtgctctgagtgtaatcaaagaggggagatcagtggtgcttacg
tctcacagcatggaagaatgtgaagccttgtgcactcgaatggcgataatggtcaatggg
cgattcaggtgcctgggcagcgtccagcatctaaagaacaggtttggagacggttacact
atcgtggtgcgaattgcaggggcaaacccagacctgaagcctgttgaggaattctttggg
catgccttccctggaagtgtcctaaaggaaaagcatcggaatatgctgcagtaccagctt
ccctcctcaccatcatccctggccagaatattcagtattctctcccagaacaaaaagaga
ctccacatagaagactactccgtttctcagaccacacttgaccaagtatttgtaaatttt
gctaaggaccaaagtgacgacgaccacactaaggacctttcattgcacaaaaaccaaact
gtggtagacattgcaatccttaattcctttctgcaagatgagaaggtaaaagaaagttgc
gtgtga
DBGET
integrated database retrieval system
