Anser cygnoides (swan goose): 106040950
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Entry
106040950 CDS
T04896
Symbol
PCDH10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106040950 (PCDH10)
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Protocadherins
106040950 (PCDH10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
106040950
NCBI-ProteinID:
XP_066852126
LinkDB
All DBs
Position
4:38443717..38480259
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AA seq
1067 aa
AA seq
DB search
MVVLFFLALLWMVEGALCQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTAPNSR
SPYLELNLETGVLYVNEKIDREQICKQSPSCLLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRTYEITPNSYFSLDVQTQGDGNRF
AELVLDQPLDREQQAVHRYVLTAVDGGQPQQRTGTALLTVRVLDSNDNVPAFEQPVYTVS
LPENSPPGTLVLQLNASDPDEGQNGEVIYSFSSHISARARELFGIAPRTGRLEVSGELDY
EESSVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEAAAPGTVVA
LFSVSDRDSEENGQVQCELLQGDAPFRLKSSFKNYYTIVTEGPLDREQPGGDAYTLTVVA
RDGGRPPLSTSKSIQVRVSDVNDNAPRFSQPVYQVFVSENNVPGAYIYAVSATDRDQGAN
ARLAYSILESQIQGMSVFTYVSINAENGFLYALRSFDYEQLKEFSFQVEARDAGEEPRPL
AANATVNIVVVDQNDNAPAIVSPVPGRNGTPARELLPRGAEPGYLVSRVAAVDADDGDNA
RLTYSIARGNEASLFRMDWRSGELRTARRVPAKRDPQRPYELLVEVRDHGQPPLSSTAAI
QVVLVDGAAERPGGGGGSGGQGAGAGAGGGGAGGEHRPSRSGGDASLDLTLILIIALGSV
SFVFLLAMIVLAVRCQKEKKLNIYTCLASDCCLGCCCCCPCCSRQARARKKKLSKSDIML
VQSSNVPSNPAQVPAEEAGSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDAE
HNPCGAIVTGYADQQPDIISNGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSK
DSGHGDSEQGDSDHDATNRGQSSGMDLFSNCTEECKALGHSDRCWMPSFVPSDGRQAADY
RSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHNTLERKELDGLLSNTRAPY
KPPYLKRGWQQSNLPHPTSPSPSRVSHPLPGYTTTKAFAISGSQSGL
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgctattcttcctcgccttgctctggatggtggagggggccctttgccagctc
cattacacggtgcaggaggagcaggagcatggcacgttcgtggggaatatcgccgaggac
ctgggcttggacattacaaaactttcggctcgccgcttccagacggcgcctaactcccgc
agcccttacctggagctcaacctggagaccggggtgctctacgtgaacgagaagatcgac
cgggagcagatctgcaagcagagcccctcctgcctgctgcacctggaggtcttcctggag
aaccccctggagctgttccgggtggagattgaggtgctggacatcaacgataacccgccc
tccttcccggagcccgatctcacggtggagatctcggagagcgccacgccgggcacccgc
ttccccctggagagcgccttcgaccccgacgtgggcaccaactcgctgcgcacctacgag
atcacccccaacagctacttctccctcgacgtgcagacgcagggcgacggcaaccgcttc
gccgagctggtgctggaccagccgctggaccgcgagcagcaagccgtgcaccgctacgtg
ctgacggcggtggacggcgggcagccccagcagcgcaccggcaccgccctgctcaccgtg
cgggtgcttgactccaacgacaacgtccctgccttcgagcagcccgtctacaccgtgtcg
ctgcccgagaactcgccgcccggcaccctggtgctgcagctcaacgccagcgaccccgac
gaggggcagaacggcgaggtcatctactccttcagcagccacatctcggcccgcgcccgg
gagctcttcggcatcgcgccgcgcaccgggcggctggaggtgagcggcgagctggactac
gaggagagcagcgtgtaccaggtgtacgtgcaagccaaggacctggggcccaacgccgtg
ccggcgcactgcaaggtgctggtgcgggtgctggacgccaacgacaacgcgcccgagatc
agcttctccaccgtcaaggaggcggtgagcgaggcggcggcgccgggcaccgtggtggcc
ctcttcagcgtgtcggaccgcgactcggaggagaacgggcaggtgcagtgcgagctgctg
cagggcgacgcgcccttccgcctcaagagctccttcaagaactactacaccatcgtcacc
gaggggccgctcgaccgcgagcagccgggcggcgacgcctacacgctgacggtggtggct
cgggacggcggccggccgccgctcagcaccagcaagtccatccaggtgcgggtgagcgac
gtgaacgacaacgcgccgcgcttctcgcagcccgtctaccaggtcttcgtcagcgagaac
aacgtgcccggcgcctacatctacgccgtcagcgccaccgaccgcgaccagggcgccaac
gcgcggctcgcctactccatcctggagagccagatccagggcatgtccgtcttcacctac
gtctccatcaacgccgagaacggcttcctctacgcgctgcgctccttcgactacgagcag
ctcaaggagttcagcttccaggtggaggcccgcgacgccggcgaggagccgcgcccgctg
gccgccaacgccaccgtcaacatcgtggtggtggaccagaacgacaacgcgcccgccatc
gtcagccccgtgccgggccgcaacggcaccccggcgagggagctgctgccccgcggcgcc
gagccgggctacctggtgagccgggtggccgccgtggacgccgacgacggcgacaacgcg
cgcctcacctacagcatcgcgcggggcaacgaggccagcctcttccgcatggactggcgc
agcggcgagctccgcacggcgcgcagggtgccggccaagcgcgacccgcagcgcccctac
gagctgctcgtcgaggtgcgcgaccacgggcagccgccgctctcctccaccgccgcgatc
caggtggtgctggtggacggcgcggccgagcggcccggcggcggcggcggcagcggcggg
cagggagccggggcgggcgcggggggcggcggggcaggcggcgagcaccgtcccagccgc
tccgggggggacgcgtcgctcgacctcaccctcatcctcatcatcgcgctgggctccgtg
tccttcgtcttcctgctggccatgatcgtgctggccgtgcgctgccagaaggagaagaag
ctcaacatctacacgtgcctggccagcgactgctgcctgggctgctgctgctgctgcccc
tgctgcagccgccaggcgcgggcccgcaagaagaagctcagcaagtcggacatcatgctg
gtgcagagctccaacgtgcccagcaacccggcgcaggtgccggccgaggaggcgggcagc
ttcggctcccaccaccacaaccagaactactgctaccaggtctgcctcacccccgagtcc
gccaagaccgacctgatgttcctcaagccgtgcagcccgtcccgcagcaccgacgccgag
cacaacccctgcggggccatcgtcactggctacgccgaccagcagcccgacatcatctcc
aacggcagcatcctctccagcgagacgaaacatcagcgtgctgagctcagttatctagtt
gatagaccccgacgggtaaacagttctgcattccaggaagcagacatagtaagctctaag
gacagtggtcatggagacagtgagcaaggagacagtgatcatgatgccactaatcgaggt
caatcctctggcatggatctcttctccaattgcacagaggaatgtaaagcactgggccac
tcagatcggtgctggatgccttcctttgtcccatccgatggacgccaagctgcagattac
cgcagcaatctgcacgtacctggcatggactccgttccagacactgaagtgtttgaaaca
ccagaagcccagccgggggcagaaaggtccttctccaccttcggcaaagagaaggccctt
cacaacactctggagaggaaggagttggatggactgctgtctaatacacgagcgccttac
aaaccaccatatttgaaacgtgggtggcagcagagtaatcttccccatcctacatccccc
agccccagccgtgtgtctcaccctttacctggatacaccactacaaaggcgtttgccatc
tctggatctcaaagtggattataa
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