KEGG   Anser cygnoides (swan goose): 106040977
Entry
106040977         CDS       T04896                                 
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
  KO
K16499  protocadherin delta 2
Organism
acyg  Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:acyg04515]
    106040977 (PCDH18)
Cell adhesion molecules [BR:acyg04515]
 Cadherins
  Protocadherins
   106040977 (PCDH18)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th Syndecan G1_gp67_N PepSY Cadherin_C_2
Other DBs
NCBI-GeneID: 106040977
NCBI-ProteinID: XP_013044642
LinkDB
Position
4:complement(40220157..40229647)
AA seq 1143 aa
MNRKNLEMQSSGSKMHFVFVFALVAVSFDKAALGKNLKYRIYEEQRVGSVIARLSEDVAD
VLLKIPNPSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHT
YSLSANDFFSIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDKGVPQRSGSSILK
ISISDSNDNSPVFEQQSYIIQLLENSPIGTLLIDLNATDPDEGANGKVVYSFSSHVSSKI
IETFRIDSEKGHLTLLKQVDYEITKSYEIDAQAQDMGPNSIPAHCKIIIKIVDVNDNRPE
INLNLMSPEKEETAYISEGSPLDTFVALVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYEN
NYLILTNASLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVV
ILENNSPGAYITSVTATDPDLGDNGQVTYTILESYILGSSITTYVTIDPSNGAIYALRTF
DHEEVNQIAFMVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEISIPKDA
GIGFLVTRIRATDRDSGMNSELSCSIAADKENSIFVMDPKTCDISINVSVESVPAKQWEF
FVIVQDKGSPQLSTKALLKCTVFEYVYSFSSTEATLVSQPSLDVSMITIISLGSICAVLL
VIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSH
HRASPSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSTDYRSNMFIPGEEF
QSSQQQLQQQQQQHQGLEEDPQPADTSEKKSFSTFGKDCQGEEESGDTCTSSLLSEMSSV
FQRLLPPSLDAYTECSEMDRSNSLERRKGHLPAKTLNYPQGVAAWAASTHFQNPANNGPT
LGTHSSAQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDV
RQN
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgaaccgcaaaaacttagagatgcagagcagcggcagtaagatgcactttgtgttcgtt
tttgcactggtggcggtgtctttcgataaggctgcgctgggcaagaatttgaaatacagg
atttacgaggagcagagagtgggatcggtaatcgcaaggctatcggaggatgtagcggat
gttttattaaaaatcccgaacccttcctcggttcgctttcgagccatgcagagggggaac
tctcccttgcttgtagtccgtgaggataacggagaaatcagcataggagctaaaattgac
cgggaacaactctgccagaaaaacttaaactgctcgatagagtttgatgtgatcactctg
cccactgaacatctgcagcttttccatgtggaagttgaagtgctggatattaacgacaac
tccccacagttttcccgggctctcatcccgattgagatatccgagagtgcagctgtagga
acccggatccctctggacagcgcttttgacccagatgtgggggacaactcccttcacact
tactccctttctgcaaatgatttttttagtattgaagtgaggacaaggactgacggcgct
aagtatgcggagctcatcgtggtcagagaactggacagggagttgaagtcaagttacgaa
ctccagctcactgcttcagataagggggtgccgcagaggtctggctcctccatcctgaaa
ataagcatttctgattccaacgacaacagtcctgtttttgaacagcagtcatatataatt
caactcttggaaaactcaccgattgggactttgcttatagacctcaatgctactgatcca
gatgagggcgctaatggtaaagttgtgtactcttttagcagtcatgtgtcttccaaaatt
atagagacttttaggatagattcagaaaagggacatctgacccttctgaagcaagtggac
tatgaaataaccaaatcctatgaaattgatgctcaggctcaagatatggggccaaattcc
attccagctcactgcaaaattataataaaaattgtggatgtgaatgacaacagacctgaa
attaacttaaacttgatgtccccagagaaagaagagacagcctacatttccgaagggtca
cccctggacacttttgttgccctagtcagagtgcaagacaaggactctggtgtgaatgga
gagatagtttgcaagctccatggccatggccactttaaacttcaaaagacttatgaaaat
aactatttaatcttgactaatgccagtctagatagggaaaagagatctgaatacagcttg
actgtaatagcagaggacaagggaacgccgagtctctctacggtaaaacactttactgtc
caaatcagtgatgaaaatgacaacccaccccgcttccagacaaacagatatgaagttgtt
atcttagaaaataactctccaggagcatacatcacatctgtgacggccacagacccagac
ctaggggacaacgggcaggtgacctacacgattttggagagctatattttgggaagttct
ataaccacctacgtgaccatagatccctccaatggggcaatctacgccctgagaactttt
gaccatgaagaagtaaatcaaattgcatttatggttcaagctagggatggagggagccag
cagcttgttagtaataccacagttgtactaaccatcattgacgaaaatgataatgctcct
gttattgtgggtccagcactacgcaacagcacagcagaaatctcaatccctaaagatgct
ggaattggctttcttgtcaccaggataagggctacagatagagactctggtatgaactct
gaactcagctgctccatagcagccgacaaggaaaacagcatcttcgtgatggatcccaaa
acttgtgacatctccatcaatgtgagtgtcgagtcagttccagcaaaacaatgggagttt
tttgtgatagtccaggataaaggtagtcctcagcttagtactaaagcacttctgaaatgt
acagtttttgagtatgtttattcattttcaagtacagaagctactctggtaagccagcct
tctctggatgtctcgatgataacaattatatccttaggatcaatatgtgccgtgttgttg
gtcattatggttatctttgccacgagatgtaatcgagagaaaaaggacaccaggtcctac
aactgtcgcgtggcagaatcaacctaccagcaccacccaaagcgaccctcacgacagatc
cacaaaggggacattacgttagtgccaacagtcaacggcactttacccatcagatcccac
cacagagcctctccatcatcatctccgaccctggaaaggggacaaatgagcagccggcag
agccaccacagccaccaatcgctgaacagcctggtgacaatctcctctaaccacgtgcct
gaaaacttctcgctggaactcacccatgctactccagctgttgagcaggtttctcaactt
ctttcgatgcttcaccaaggccagtatcaaccaaggccaagttttcgaggaaacaagtat
tccagaagctacagatatgccctacaagatatggataaattcagcttgaaagacagtggc
cgtggtgatagtgaagctggagacagcgattatgatttgggtagagagtctccaattgac
agacttcttggggaaggattcagtgaccttttccttacagatgggagaattcctgcagca
atgcggctgtgcacagaggaatgcagggttctgggccactcagaccagtgctggatgcca
ccactgccctctccctcgactgattacagaagtaatatgttcatccctggggaggagttt
cagtcgtcgcagcagcagttgcagcagcagcagcagcagcatcagggccttgaggaagat
ccgcagcctgctgacacaagtgaaaagaagagcttttcaacgtttggcaaagactgtcag
ggagaggaggaatcgggggacacctgcacctcctctctcctctctgaaatgagcagtgtc
ttccagcgcctgctgcctccctcactagatgcctacacagagtgcagtgagatggatcgc
tcgaattcgctggagcgcaggaagggacatttgccagccaaaactctaaattatccacag
ggggttgctgcctgggcagccagcacacatttccaaaatcctgccaacaatgggcccact
ctggggactcactcaagtgcgcagccttcctctaaatggctgccagccatggaggaaatc
ccagagaattacgaagaagatgattttgacaatgtgctcaaccaccttagtgatggcaaa
cacgaactcatggatgccagtgagctggtggcagaaattaacaagctgctgcaagatgtc
cggcagaactaa

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