Anser cygnoides (swan goose): 106040977
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Entry
106040977 CDS
T04896
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106040977 (PCDH18)
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Protocadherins
106040977 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Syndecan
G1_gp67_N
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
106040977
NCBI-ProteinID:
XP_013044642
LinkDB
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Position
4:complement(40220157..40229647)
Genome browser
AA seq
1143 aa
AA seq
DB search
MNRKNLEMQSSGSKMHFVFVFALVAVSFDKAALGKNLKYRIYEEQRVGSVIARLSEDVAD
VLLKIPNPSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHT
YSLSANDFFSIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDKGVPQRSGSSILK
ISISDSNDNSPVFEQQSYIIQLLENSPIGTLLIDLNATDPDEGANGKVVYSFSSHVSSKI
IETFRIDSEKGHLTLLKQVDYEITKSYEIDAQAQDMGPNSIPAHCKIIIKIVDVNDNRPE
INLNLMSPEKEETAYISEGSPLDTFVALVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYEN
NYLILTNASLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVV
ILENNSPGAYITSVTATDPDLGDNGQVTYTILESYILGSSITTYVTIDPSNGAIYALRTF
DHEEVNQIAFMVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEISIPKDA
GIGFLVTRIRATDRDSGMNSELSCSIAADKENSIFVMDPKTCDISINVSVESVPAKQWEF
FVIVQDKGSPQLSTKALLKCTVFEYVYSFSSTEATLVSQPSLDVSMITIISLGSICAVLL
VIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSH
HRASPSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSTDYRSNMFIPGEEF
QSSQQQLQQQQQQHQGLEEDPQPADTSEKKSFSTFGKDCQGEEESGDTCTSSLLSEMSSV
FQRLLPPSLDAYTECSEMDRSNSLERRKGHLPAKTLNYPQGVAAWAASTHFQNPANNGPT
LGTHSSAQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDV
RQN
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaaaaacttagagatgcagagcagcggcagtaagatgcactttgtgttcgtt
tttgcactggtggcggtgtctttcgataaggctgcgctgggcaagaatttgaaatacagg
atttacgaggagcagagagtgggatcggtaatcgcaaggctatcggaggatgtagcggat
gttttattaaaaatcccgaacccttcctcggttcgctttcgagccatgcagagggggaac
tctcccttgcttgtagtccgtgaggataacggagaaatcagcataggagctaaaattgac
cgggaacaactctgccagaaaaacttaaactgctcgatagagtttgatgtgatcactctg
cccactgaacatctgcagcttttccatgtggaagttgaagtgctggatattaacgacaac
tccccacagttttcccgggctctcatcccgattgagatatccgagagtgcagctgtagga
acccggatccctctggacagcgcttttgacccagatgtgggggacaactcccttcacact
tactccctttctgcaaatgatttttttagtattgaagtgaggacaaggactgacggcgct
aagtatgcggagctcatcgtggtcagagaactggacagggagttgaagtcaagttacgaa
ctccagctcactgcttcagataagggggtgccgcagaggtctggctcctccatcctgaaa
ataagcatttctgattccaacgacaacagtcctgtttttgaacagcagtcatatataatt
caactcttggaaaactcaccgattgggactttgcttatagacctcaatgctactgatcca
gatgagggcgctaatggtaaagttgtgtactcttttagcagtcatgtgtcttccaaaatt
atagagacttttaggatagattcagaaaagggacatctgacccttctgaagcaagtggac
tatgaaataaccaaatcctatgaaattgatgctcaggctcaagatatggggccaaattcc
attccagctcactgcaaaattataataaaaattgtggatgtgaatgacaacagacctgaa
attaacttaaacttgatgtccccagagaaagaagagacagcctacatttccgaagggtca
cccctggacacttttgttgccctagtcagagtgcaagacaaggactctggtgtgaatgga
gagatagtttgcaagctccatggccatggccactttaaacttcaaaagacttatgaaaat
aactatttaatcttgactaatgccagtctagatagggaaaagagatctgaatacagcttg
actgtaatagcagaggacaagggaacgccgagtctctctacggtaaaacactttactgtc
caaatcagtgatgaaaatgacaacccaccccgcttccagacaaacagatatgaagttgtt
atcttagaaaataactctccaggagcatacatcacatctgtgacggccacagacccagac
ctaggggacaacgggcaggtgacctacacgattttggagagctatattttgggaagttct
ataaccacctacgtgaccatagatccctccaatggggcaatctacgccctgagaactttt
gaccatgaagaagtaaatcaaattgcatttatggttcaagctagggatggagggagccag
cagcttgttagtaataccacagttgtactaaccatcattgacgaaaatgataatgctcct
gttattgtgggtccagcactacgcaacagcacagcagaaatctcaatccctaaagatgct
ggaattggctttcttgtcaccaggataagggctacagatagagactctggtatgaactct
gaactcagctgctccatagcagccgacaaggaaaacagcatcttcgtgatggatcccaaa
acttgtgacatctccatcaatgtgagtgtcgagtcagttccagcaaaacaatgggagttt
tttgtgatagtccaggataaaggtagtcctcagcttagtactaaagcacttctgaaatgt
acagtttttgagtatgtttattcattttcaagtacagaagctactctggtaagccagcct
tctctggatgtctcgatgataacaattatatccttaggatcaatatgtgccgtgttgttg
gtcattatggttatctttgccacgagatgtaatcgagagaaaaaggacaccaggtcctac
aactgtcgcgtggcagaatcaacctaccagcaccacccaaagcgaccctcacgacagatc
cacaaaggggacattacgttagtgccaacagtcaacggcactttacccatcagatcccac
cacagagcctctccatcatcatctccgaccctggaaaggggacaaatgagcagccggcag
agccaccacagccaccaatcgctgaacagcctggtgacaatctcctctaaccacgtgcct
gaaaacttctcgctggaactcacccatgctactccagctgttgagcaggtttctcaactt
ctttcgatgcttcaccaaggccagtatcaaccaaggccaagttttcgaggaaacaagtat
tccagaagctacagatatgccctacaagatatggataaattcagcttgaaagacagtggc
cgtggtgatagtgaagctggagacagcgattatgatttgggtagagagtctccaattgac
agacttcttggggaaggattcagtgaccttttccttacagatgggagaattcctgcagca
atgcggctgtgcacagaggaatgcagggttctgggccactcagaccagtgctggatgcca
ccactgccctctccctcgactgattacagaagtaatatgttcatccctggggaggagttt
cagtcgtcgcagcagcagttgcagcagcagcagcagcagcatcagggccttgaggaagat
ccgcagcctgctgacacaagtgaaaagaagagcttttcaacgtttggcaaagactgtcag
ggagaggaggaatcgggggacacctgcacctcctctctcctctctgaaatgagcagtgtc
ttccagcgcctgctgcctccctcactagatgcctacacagagtgcagtgagatggatcgc
tcgaattcgctggagcgcaggaagggacatttgccagccaaaactctaaattatccacag
ggggttgctgcctgggcagccagcacacatttccaaaatcctgccaacaatgggcccact
ctggggactcactcaagtgcgcagccttcctctaaatggctgccagccatggaggaaatc
ccagagaattacgaagaagatgattttgacaatgtgctcaaccaccttagtgatggcaaa
cacgaactcatggatgccagtgagctggtggcagaaattaacaagctgctgcaagatgtc
cggcagaactaa
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