Anser cygnoides (swan goose): 106041189
Help
Entry
106041189 CDS
T04896
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
106041189 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
acyg01001
]
106041189 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
acyg04054
]
106041189 (CIITA)
Enzymes [BR:
acyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106041189 (CIITA)
Protein kinases [BR:
acyg01001
]
Serine/threonine kinases: Other
TAF1 family
106041189 (CIITA)
Pattern recognition receptors [BR:
acyg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106041189 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
NB-ARC
LRR_9
LRR_14
RsgA_GTPase
NPHP3_N
AAA
Motif
Other DBs
NCBI-GeneID:
106041189
NCBI-ProteinID:
XP_013044910
UniProt:
A0A8B9ENJ2
LinkDB
All DBs
Position
15:17508869..17542755
Genome browser
AA seq
1196 aa
AA seq
DB search
MNLFKEILPRIRKILSGATASDDHALLNLMLKEHVISKEYHQALLHEKDKEDLARKISLT
FVEKWDLYWNTLIPHSCLNFCGSRPQNITDNEPTGTKHMSDSKRQIMDSALVCENGYLDL
LHSDIDPVHLFTLLDPKSSGNEEGDLFADSEIDASNYDQLNSMDFLCTVENDENGDELYL
SSNAREAYARIAELAEYVLKDQQEKQVEDTFAGSLILDEMTAENTEIFTDVKMQKCHKRT
FLGSVESCADVSEPKCKKIVDAPAVSTRNGSFLAMPLSSHPASSTSLTHQHMSFSVPAIN
ALGRSFVIPVSGSSAPLIPECLPLGMKDKQENIDFPDPAQQKNNFLIGNATSSIIAYPGL
EMFKEVQVPVIPSEEPFKRPRSVEVFCTALKDYFGDICKSVAMEREVTLDHLFIDGTLVQ
NQIETKTGKNSVKAMEKELVTYSLQWKEKASLERSQIFQIPGGKDLETKVIVVLGKAGMG
KSILVQKICQDWSNGEFPQFEFLFWFDCKQISLPEKCYSLKDLLLDFFVKPQEGSKEIFE
YILQNPAKVLLVFDGFEGLQDHENFSRCSNRQPGKDTYSIKELLSGLIQKKILNGCTLLL
TARPKDKVNQYVSKVDKTIEIVGFSPQQRELYITKYFEGLPYCDNALKLIKESEYLFSHC
YSPVMCRFVCFLCETVLEMGDKGLPSTLTTLFLKFVQQKIIPMQTDVTAVQNQKSLATLA
RIAWYLGEKHRSTMKSDLLPSKEVKEFALKYGFFLPFAFPEHSDTEEEEFGTTFSDFVIQ
NFLGALHLILAEDVKDKSLTKYLSFPSKKKKPYNWLDLLPRFLAGLLFLQDDAYFCSLSN
KEIKQSTKKQKTLLKCIRRLQINDFCPERLLELLHCIYETQYNYLLQHVTLRLKPDLSFQ
GIVITPPDVHVLYSTLKRSRKEFSLDLQNSSIDMQGLKDLVGLKNVASFRASLGDTIRLW
KYLEQTKDYELLKLSTEKFVLDPFKAKTMKDVSDLSDLVEMQEMINCMQDASGCSSYEIP
AIKNLRKIEFALGPAYGLQGFLKLVEILPSFPSLQHLDLDALSENGIGDEGAKSLSEVFP
TLRSLEILNLSQNKITDVGAEKLATALPSLSSLTTLSLYNNNICDFGAENLAVVLPAMAS
LRVLDVQYNKITGVGAQQLTDSLQKCPHIKNLLMWNPTIPYGVLEHLQQLDSRISV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttttaaggagatcctgcccagaataaggaagattctttcaggtgctacagct
tctgatgaccatgcattgcttaaccttatgctgaaagaacatgtgatatccaaggagtac
catcaggccttgctccatgaaaaagataaagaagaccttgcaaggaagatttctctgaca
tttgtggagaaatgggacctgtattggaatactttgattccccactcttgtttaaacttc
tgtggcagtagacctcaaaacatcacagataatgagccaacaggaaccaagcacatgtct
gacagcaagagacaaatcatggattcagcattggtgtgtgaaaatggctatcttgatttg
ctgcacagtgacatcgatccagtgcatctgtttactctcttagaccctaagtcatctgga
aatgaagagggtgacttgtttgcagattctgaaattgatgccagcaactatgatcagttg
aatagtatggatttcctgtgtacagtggaaaatgatgaaaatggggatgaattatatctc
tcttccaatgccagagaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcaggtggaagacacttttgcagggagccttattttggatgaaatg
actgctgaaaacactgagatatttactgatgtaaagatgcagaaatgtcacaaaagaaca
tttttaggctccgtagagagttgtgctgatgtttcagaacccaaatgcaagaaaattgtg
gatgcccctgcagtgtctacaaggaatggcagtttcttggctatgcctctcagcagccat
ccagctagctccacctcgctaactcaccagcacatgtccttttctgtccccgctatcaat
gcactgggaagaagttttgtaattcctgtttcaggatcttcagcacctttgattccagag
tgtctaccccttggcatgaaagacaaacaagagaatatagactttccagatcctgctcag
cagaaaaacaattttttaattggaaatgccacatcaagtattatagcatacccaggctta
gaaatgttcaaagaagtccaagttcctgtaattccttctgaagaacctttcaaaagacca
aggtcagtggaagttttctgtacagcgcttaaggattactttggagacatatgcaaatct
gtggccatggagcgtgaagtgactcttgatcacttgtttattgatggtacactcgtgcaa
aaccaaattgaaaccaagactgggaagaacagtgtaaaagcaatggaaaaggagctggta
acttacagtctacaatggaaggaaaaggcatcacttgaaagaagccaaatatttcaaatc
ccaggaggtaaagatttagagactaaagtgattgtggtgctgggaaaagcaggaatgggc
aaaagcattcttgtacagaagatctgccaggactggtccaatggagagtttcctcagttt
gaatttcttttttggtttgactgcaaacaaataagcttgcctgagaagtgttacagcttg
aaggatctgcttcttgatttttttgtaaaacctcaggagggaagcaaagagatctttgag
tacatattgcaaaatcctgctaaagtccttctggtttttgatggttttgaaggattgcaa
gaccatgagaatttttctcgttgctcaaacagacagcctggcaaagacacgtacagtata
aaggagctgctttcaggacttatccaaaaaaagatactcaatggctgtactttattactt
acagcaagaccgaaagacaaggtgaaccagtatgtgtccaaagtggataagactattgaa
atagtaggattctctcctcagcagagagaattgtacataaccaaatactttgaaggatta
ccctactgcgataatgcactgaaattaatcaaagagagtgagtacctgttcagtcattgt
tacagccctgttatgtgtagatttgtttgttttctctgtgagacagtacttgaaatggga
gacaaaggccttccttcaactcttactacacttttcctgaaatttgttcagcaaaagata
atacctatgcaaacagatgttacagctgtgcaaaatcaaaagagccttgctacactagcc
cgtatagcctggtatcttggagaaaagcaccggagtaccatgaaaagtgatcttcttcct
tctaaggaagttaaagaatttgctctgaaatatggatttttcctgccatttgcattccct
gaacattcagatactgaggaggaggaatttgggaccacattctccgattttgtcattcag
aatttcttgggtgcactccaccttatattagcagaagatgtgaaggataaaagtctaacg
aagtatctgtcttttccatccaagaagaaaaagccttataactggttagatttactgcct
cgatttttggctggattgttgttcctccaggatgatgcctacttctgctccctttctaat
aaggaaataaaacaatcaaccaagaagcagaaaacgctcctgaaatgtattagaaggttg
cagataaatgacttctgtccagagaggttactcgagcttttacactgcatatatgaaaca
caatacaattatcttttgcagcatgtgacattaaggctcaagccagacctgtcttttcag
ggcattgttattacaccaccagatgttcatgtactgtactctactttaaaaaggtcaaga
aaagagttttccttggatttgcaaaacagcagcattgacatgcaagggctgaaagacttg
gttggcctgaagaatgtggcatcattcagggcctcccttggtgatacaatcaggctatgg
aaatacttggaacagacaaaagactatgaactgttgaaactgtcaacagaaaaatttgtt
ctcgatccctttaaggcaaagacaatgaaggacgtcagtgacctttcagacctcgtagaa
atgcaggagatgatcaattgcatgcaagatgcctctggttgcagcagctatgaaattcct
gccataaagaacctgagaaaaatagaatttgctctaggtccagcatacggccttcaggga
tttctaaaacttgtggaaattctgccgtcatttccatcacttcagcatttagaccttgat
gctctgagtgaaaatggcataggagatgaaggagcaaagagtctatctgaagtctttcca
acactgagatcactggaaatattgaatttatcacagaataagataacagatgtgggtgca
gagaaactagctacagctcttccttccttatcttcattaacaacactaagcttgtacaat
aataacatttgtgattttggagcagaaaatcttgcagttgttcttcctgcaatggcatct
ttaagagtgctagatgttcagtataacaaaataactggtgttggagcccaacagctgact
gacagcctacaaaaatgtccccatataaaaaacttgctgatgtggaatcctacaattccc
tatggagttcttgaacaccttcagcagctggactcgaggatcagcgtgtag
DBGET
integrated database retrieval system
