Anser cygnoides (swan goose): 106041488
Help
Entry
106041488 CDS
T04896
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03030
DNA replication
acyg03420
Nucleotide excision repair
acyg03430
Mismatch repair
acyg03440
Homologous recombination
acyg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106041488 (RPA1)
03420 Nucleotide excision repair
106041488 (RPA1)
03430 Mismatch repair
106041488 (RPA1)
03440 Homologous recombination
106041488 (RPA1)
03460 Fanconi anemia pathway
106041488 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyg03000
]
106041488 (RPA1)
03032 DNA replication proteins [BR:
acyg03032
]
106041488 (RPA1)
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106041488 (RPA1)
Transcription factors [BR:
acyg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106041488 (RPA1)
DNA replication proteins [BR:
acyg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106041488 (RPA1)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106041488 (RPA1)
MMR (mismatch excision repair)
106041488 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
106041488 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
106041488
NCBI-ProteinID:
XP_047923916
LinkDB
All DBs
Position
18:7519668..7542529
Genome browser
AA seq
641 aa
AA seq
DB search
MTRRKRERGSERREDLAVAERGGSGGTMSVRLSEGAIAAIMQGESVTKPVLQVINTRAIA
TGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAQCICQVNRFIVNSLKDGRRVV
ILMDLDVLKTADMVGGNIGNPVPYNEGQGQQRSSAPAANAAPNKPQQQNGNVSVAGPPAP
KYHAPSNQFSKASAPSAMKTPGGSQAKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSR
GEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDY
EITFTNETSVVPCDDAQHLPSVQFEFVSISELENTPKDSIVDVIGICKSYEDVTKITVKA
SNREVSKRNVHLMDTSGKLVTATLWGNEAETFDGSRQPVVAIRGARVSDFGGRSLSVLSS
STVVVNPDTPEAFKLRGWFDSEGQLLECSSISDVRGGSASGVNTNWKTLFEAKAENLGQG
DKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMML
LVTIADCLEYQWVTCFQDTAEFILGQSAALLGELKEKNEQAFEEVFQNANFNTYEFRIRV
KLETYNDESRIKATAMDVKPVNYREYSKRLIANIRRNAQLG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccggaagcgggagcgcggctcggagcggcgggaggatttggcggtggcggag
cgcggcgggagcggcggcaccatgagcgtgcggctcagcgagggcgccatcgcggccatc
atgcagggggagagcgtcacgaagcctgtgctgcaagtcatcaatacacgggccattgct
acaggaaatgggcctccacgttaccgagtgttgatgagcgacggggttaacacgctgtcc
tccttcatgttggcaacgcagctgaactctctcgtggaagaggaacgcttatcagcccag
tgtatttgccaggttaacagattcattgtcaacagcttaaaagatggaaggagagtggtt
atcttgatggacttagatgttctgaaaactgctgatatggttggtggtaatattggcaat
ccagtgccgtacaacgaagggcaggggcagcagcgttcttcagctccagcagcaaatgca
gcacccaacaaaccacagcaacaaaatggcaatgtgtcagtagcagggcctcctgctcca
aagtaccacgctccctcaaaccagttcagtaaagcgagtgctcccagcgcaatgaagaca
ccagggggatcccaggctaaagtagtgccgattgccagcttgaatccataccaatctaag
tggaccatttgcgctcgtgttacccaaaaaggccagatccgcacatggagcaactcccgc
ggggaaggaaagctcttttctatagagctagttgatgaaagtggtgagattagagctact
gcgttcaatgatcaagcagacaagttctttcctctcattgaactgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactat
gagattacattcactaatgagacttcagttgtgccctgtgatgatgcccagcatcttcca
tctgttcagtttgagtttgtatccatctccgagttggagaacacacccaaagactcaatt
gtcgatgtaattggaatctgtaagagctatgaagatgtcactaaaattacagtgaaagct
agcaatagggaggtatcaaagaggaatgtgcatctgatggatacatcagggaaactggtg
acagctacgctatggggaaatgaggctgagacgtttgatggttctagacaacctgtggta
gccatcagaggagcccgagtctctgattttggtggtagaagcctttctgtcctgtcgtcg
agtacagttgtcgtcaaccctgataccccagaggcttttaagcttcgaggatggtttgac
tccgaggggcagcttctggaatgctcctcgatctctgatgtaagaggtggatcagcatct
ggggtgaacaccaactggaaaactttgtttgaagccaaagctgagaacttgggacaagga
gataaggcggattattttagctgtgtgggcacagtagtacatctgcgcaaagagaactgt
atgtaccaggcctgtccctctcaggattgcaataagaaagtgatagaccaacagaatgga
ctgtatcgttgtgaaaagtgtgatcgtgaattccccaatttcaagtaccgcatgatgctt
ctggtgaccattgcagactgtctagagtatcagtgggtgacttgcttccaagatacagca
gaattcattcttgggcaaagtgctgctctcctgggagaactgaaggaaaagaatgagcag
gcatttgaagaagtcttccaaaatgccaacttcaacacgtatgagttcaggatcagagta
aaactggagacttacaacgatgaatcccgtattaaggctacagcaatggatgtcaaaccc
gtaaactacagagaatacagcaagaggttgatcgcaaacatcaggagaaatgctcagctg
ggatga
DBGET
integrated database retrieval system
