KEGG   Anser cygnoides (swan goose): 106041989
Entry
106041989         CDS       T04896                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
acyg  Anser cygnoides (swan goose)
Pathway
acyg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106041989 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acyg03041]
    106041989 (PRPF38B)
Spliceosome [BR:acyg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    106041989 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 106041989
NCBI-ProteinID: XP_047922856
LinkDB
Position
8:6643178..6652334
AA seq 549 aa
MANNSPAVGAGNCQGQQAAQHQPGAVPPGQQQLQSGAPKPAASGKQGNVLPLWGNEKTMN
LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR
GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW
FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKSRP
RKIKKDGKEGMEEIDRHVERRRSRSPRRSISPRRSPRRSRSRSHHREPHGSSSFDRELER
ERERQRLEREAKEREKERRRSRSTDRTLERRRSRSRERYRSRSRSRDRKGDRRDRDRERE
KENERSRKKERDYDKERGSEREKDSDRSRERSKERRSKGDIEERRHKDDKDDKKHRDDKR
DSKKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKDKSSKHKSESKEKSNKRSRSRSRG
RTDSVEKSKKRDHSPSKERSRKRSRSKDRSHKHDPSDSKDHSDKHDRRRSQSTERESQEK
QHKNKDETV
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggccaacaacagccccgccgtgggcgccggcaactgccaggggcagcaggcggcccag
caccagcccggcgccgtgcccccgggccagcagcagctgcagagcggcgccccgaagccg
gcggcctccggcaagcagggcaacgtgctgccgctgtggggcaacgagaagaccatgaac
ctcaaccccatgatcctcaccaacatcctctcgtcgccctacttcaaggtgcagctctac
gagctgaagacgtaccacgaggtggtggacgagatctacttcaaggttacacatgttgaa
ccatgggaaaaggggagtagaaaaacagcaggccagacaggaatgtgtggaggggtccgt
ggtgttggaactggaggaattgtgtctactgccttttgtctgctctacaaattatttaca
ctgaagctcacccgtaagcaagtgatgggccttataactcatacagactctccatatatt
agggctcttggatttatgtatattaggtacacacaaccacctacagatctatgggactgg
tttgaatcctttcttgatgatgaagaggacttggatgtgaaggcaggtgggggctgtgtt
atgaccatcggggagatgcttcgttccttcctcactaagctggaatggttttccacgttg
tttccaagaattcctgtgccagtccagaaaactatcgaccaacaaattaaaagcagaccc
agaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcatgtagaacgt
agacgttcaaggtctccaaggcgatccatcagtcccaggaggtctcccagaagatccaga
agcagaagtcatcatcgggaaccacatggatcatctagctttgacagagaactagaaaga
gagagagaacggcagagattagaacgtgaagcaaaggagagagaaaaagaaaggcggaga
tctcgaagtactgatcgcacactagaacggagacgaagcagaagcagagaacggtacaga
agccgtagtcggagtcgtgacaggaaaggagatagacgagacagggacagggaacgagag
aaagaaaatgaacgcagccggaaaaaagagagagattatgacaaggagagaggtagcgag
agggaaaaagatagcgatcggtctagggaaagatcaaaagaaaggagaagtaagggtgat
atagaagagagaagacacaaggatgacaaagatgacaagaaacaccgggatgataagagg
gattccaaaaaagagagaaaacatagtagaagtcgaagccgggaaagaaagcataggagt
agaagtcgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagacaaatcaagt
aaacataaaagtgaaagtaaagagaaatcaaataaacgaagtaggagcagaagcagagga
agaacagatagtgtcgagaagtccaaaaaacgagaccacagtcccagtaaagaaagatct
agaaagcgtagtagaagcaaagaccgttcccacaaacatgatcccagtgatagcaaggac
cattcggacaaacacgatcgtcgaaggagccaaagtacagagcgagagagccaagaaaag
caacacaaaaacaaagatgagactgtgtga

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