Anser cygnoides (swan goose): 106042253
Help
Entry
106042253 CDS
T04896
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acyg03037
]
106042253 (CCDC88A)
Cilium and associated proteins [BR:
acyg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106042253 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
HOOK
PRR11_2nd
Motif
Other DBs
NCBI-GeneID:
106042253
NCBI-ProteinID:
XP_066851490
LinkDB
All DBs
Position
3:9300125..9390978
Genome browser
AA seq
2068 aa
AA seq
DB search
MENEIFTPLLEQFMSSPLVTWVKTFGPLAGRNGTNLEEYVALVDGVFLSEVMLQINPKSA
NQRINKKVNNDTSLRIQNLSILVKQIKTYYQETLQQLIMMSLPNVLIIGRNPFSEPGTEE
IKKLLLLLLGCAVQCQKKEEFIESIQCLDFDTRAAVAAHIQEVTHNQENVFDLQWMEVIV
LTQEYVEPLLKNMALHLKRLIDERDKHSETIIELSEERDSLRFLPHASAAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEAELKRLQQENMNLLSE
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ
SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQN
AVGSVEDSSSKILKMEKENQRLNKKLEGLENEISQEKQSLQNSQNLSKDLMKEKTQLEKT
LEALRENSERQIKLLEQENEHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSS
KLNKIEFEKKQVRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEAL
EQENSDLETENRKLKKTLDSLKNLSFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA
QLQLENKELESEKEQLKKSLELMKASFKKSERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDSTLEENNVKISNLEKENKSLFKEIVVYKESCVRLKELEKENKELVKRATIDK
KTLVTLREDLVSEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDSRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSP
PRSGEENQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNS
NLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALEN
ENECVLKDHEDLKSLYDSLLKDHEKLEHLHERQASEYESLIAKHGSLKSAHKNLEVEHKD
LEDRYNQLLKQKVQLEELEKVLKIEQEKMLQQNEKHETVAVEYKKLRDENDRLAHTYSQL
LRENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLREQYQQLDITSTKLNNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYEPSPPRRRGNWIALKMKKLIKSKKDANRERLKSVTLTPTRSESSEGFLQLPHQ
DSQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQ
SMVLAGGQWTGSSEHLEGPDDISAGKRRKELGAMAFSTTAINFAAVNSSTGFRSKQLLNN
KDTTSFEDVSPQGISDDSSTGSRVHGVQDINCADALAPPVRGISTMCKVPCQICSSRPAS
LDSGRTSTSNSNNNASLHEVKAGVVNNQSRPQSHSSGEFSLLHEHEAWSSSSSSPIQYLK
GHTRSSPVLQQRTPETLDSRGKQIKNGSPGSEVVTLQQFLEESNKSTSSEMKSASEENLL
DEVMKSLSESAELTGKEKLRKQASAGCGIVRSLSVKNTVDFSDGRSIKPEQLVRPSFRKT
EDAYFTSSPIKFTSGTQGKTKSVKEKMQATVSQRQSRDCNPYATLPRASSVISTAEGTTR
RTSIHDFLSKDIRQPVSVDPAPSTADRSVPATSSEYSAHQLSPNVLHCVAYRIDCVPQSD
AANTVKPRNLGCNFDVPKTPRMERSNFHEKTLSTNVFNDKVSVSGNDSTRSFTVAHPFLS
LNTELVSNISGLPPRSASKTDQANLSTFRSVLKSQEQPSANQKSDHSDLRSALTSEFAPT
TCVTTSEAEPPLLVSEDNKTVWYEYGCV
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatattcacaccccttttggagcagttcatgtctagccctcttgtcacc
tgggttaagacatttggaccgttagctggaagaaacgggaccaacctggaggaatatgtg
gcgctagtggatggcgtgttcctgagcgaagtcatgctgcaaattaatccaaaatctgct
aatcagaggataaataaaaaagtcaacaacgatacatcactaaggattcagaatttgtct
attttggtgaagcaaataaaaacttactatcaggagactttgcagcagttgatcatgatg
tctttgccaaacgtgttaataattggcagaaatcctttttctgagccaggtactgaagaa
ataaaaaaactgctgctgctgctacttgggtgtgcggttcagtgtcagaaaaaagaggaa
ttcattgaaagtatccaatgtctggattttgacacgagagcagctgttgcagcccatatt
caagaggtaactcataatcaagaaaatgtgtttgatctgcagtggatggaggtcattgta
ttgacacaagaatatgttgaacctctcttgaaaaacatggcattacatttgaaaagactt
atagatgaaagagataagcactcagagactatcatagaactctcagaagaacgggactct
ctccgttttctacctcatgcatcagcagcacagtcaccttgtggatctcctggcatgaaa
cgcaccgaaagcaggcagcacctgtcagtagagctagcagatgccaaagcaaagataaga
aggcttagacaagagcttgaggaaaagactgagcagttgcttgactgtaaacaagaactt
gaacagatggaagctgaactaaagagacttcagcaggagaacatgaatttactctccgag
gcccgttctgccagagtgtatagagatgaattagatgctcttcgtgagaaggcaattcga
gtcgacaagcttgaaagtgaagtcagccggtataaagagaggctgcatgatattgaattc
tacaaagctagagtggaggagttaaaggaagacaatcaagtgttgctagaaacaaagaca
atgttggaagatcagctggaggggacacgagcccgttcggataaattacatgagttagaa
aaagagaatctacaattaaaagctaaattacatgatatggagatggagcgtgatatggac
agaaagaagattgaggaactcatggaggaaaatatgactctagaaatggctcagaaacaa
agtatggatgaatcgttgcatctcggctgggaacttgaacagataaataggactactgaa
ctttctgaagtgccacagaaatcacttggtcatgaagtaaatgaactgacatcaagcaga
ttactgaagttggaaatggaaaaccaaagtttgctgaagacagtggaagaattacaaaat
gcagtgggttctgtagaagacagtagttcaaagattctgaaaatggaaaaggaaaaccaa
agacttaacaaaaagcttgaagggctagagaatgaaattagccaagagaaacaaagtctg
cagaacagtcaaaatttgagtaaagatttgatgaaggaaaaaacacagcttgaaaagaca
cttgaggcacttcgagaaaactcagagcgacaaattaagctattagaacaagaaaatgaa
catttgaatcaaactgtagcttctctaagacaacgctcacaaatcagtgctgaagcgaga
atgaaggaaattgaaaaagaaaataaaattcttcatgagtctattaaagaaaccagtagt
aagttaaataagattgaatttgagaaaaaacaagtgagaaaagaactggaacattataaa
gagaaaggggagagagcagaagaactcgagaatgagctgcatcatctggagaaggaaaat
gaattattacagaaaaaaattactaacttaaaaattacttgtgagaagatagaggcctta
gaacaagaaaactcagacctggagacggaaaacagaaagctgaaaaagactttggatagc
ctaaaaaatctctcttttcaattagaatccttggaaaaggaaaattcacaacttgatgaa
gaaaacttagaattaagaagaacaattgaatctttgaagtgtacaagcattaaggtggca
caactacaattggaaaataaggaactggagagtgaaaaggaacaacttaaaaaaagcctt
gaactcatgaaagcctcatttaagaaaagtgaacgcttagaagtcagctaccaaggtcta
gacacagaaaaccaaaggttacagaaagcccttgaaaacagcaataagaaaattcagcaa
ctagaaagtgaattacaagatttagagtctgaaaatcagactctgcagaaaaacttagaa
gagttgaaaatctctagtaagcgcctagagcaattggaaaaggagaataagttgttagaa
caagagacttctcaactggaaaaagataagaaacagttagaaaaagaaaataaaagactt
cgacaacaagcagaaattaaagatagtactttagaagaaaacaatgtaaaaattagcaat
ctggaaaaggaaaataaatctctatttaaagaaatagttgtatataaggagtcatgcgtt
cgcctgaaagaactagaaaaggaaaataaagaacttgtgaaaagagctactattgataag
aaaacccttgtcactttacgagaggacttggtgagtgaaaaattgaagacccaacaaatg
aacaatgatctagaaaagcttgcccatgaacttgaaaaaataggcttaaacaaggagcgt
ctcttgcatgatgaacagagtagtgatgacagtaggtacaagcttctggagtcaaaatta
gaatccacacttaagaagtctcttgaaataaaagaagaaaaaattgctgctttggaggct
cgtttagaagaatcaacaaatttaaaccagcaactccgtcaagagcttaaaacagtgaaa
aagaactacgaagccctcaagcaaagacaagaagaggaaaggatggttcagaattctcct
ccaagaagtggagaagaaaatcagtctgtcaataagtgggagaaagaaaatcaggaaact
actagagaattactgaaagttaaagatagattaatagaagtggaaaggaataatgctaca
ctgcaggcagagaaacaagcactgaaaacacaattaaagcagcttgaaacacagaatagt
aatctgcaggctcagattcttgcacttcagagacagactgtttctctacaagaacaaaat
acaactttacaaactcaaaatgccaagcttcaggttgaaaattccacccttaattctcaa
agtacatctcttatgaatcagaatgctcaactgttgatccaacagtctgcactagaaaat
gaaaatgaatgtgtgctcaaggatcatgaggatctgaaatccttgtacgattcacttctc
aaagatcatgaaaaactggaacacctacatgaacgtcaagcttctgagtatgaatcgctg
attgctaaacatggaagtcttaaatctgcacacaaaaatctggaggtggagcataaggac
ttagaagataggtacaatcagttgctgaaacagaaagtgcagttggaagagttggagaaa
gtgctcaagatagaacaggagaaaatgcttcagcaaaatgaaaaacacgaaactgtagca
gtagaatataagaaacttcgtgatgaaaatgataggcttgctcatacatacagtcaactc
ttaagagagaatgaagttctgcaaactgatcataagaatctgaaaacattattgaacaat
tctaaactagaacaaacgcgattagaagccgagttttctaaacttagagaacaataccaa
caactggatattacatctaccaaattaaataatcaatgtgagctgcttagccagcttaaa
ggaaatctggaggaggaaaacagacatctactagatcaaattcagacattaatgctacaa
aatagaacattacttgagcagaatatggaaagcaaggatctcttccatgtagagcaaagg
cagtacattgacaagctaaatgaattaaggcgacagaaggagaaattggaagagaagata
atggatcagtataaattttatgagccatctccaccaagaagaaggggtaactggattgct
ctgaagatgaagaagctgataaaatccaagaaggatgctaatcgagaacgtttgaaatct
gtgacccttacgcctacccgttcagaatccagtgaaggatttcttcagctgccccaccag
gacagtcaagatagttcttcagtgggctcaaattctcttgaagatggccagaccctggga
accaaaaagagtagtatggttgcactgaaaagactgccctttttgaggaacagaccgaag
gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcag
tccatggtcctagcaggaggacaatggacaggtagttctgagcatctggagggtcctgat
gatatatctgcgggtaaaaggagaaaagaattgggagctatggccttctctactacagct
atcaactttgcagctgtcaactcttctacaggcttcagatccaagcagttgctaaataat
aaagatactacatcctttgaagatgtaagtccacaaggtattagtgatgattctagtaca
ggatcaagagttcatggagtacaggacattaactgtgcagatgctcttgctcctcctgtt
cgtggcatttcaacaatgtgcaaggttccttgtcaaatctgttcttccagaccagccagc
cttgatagtggcagaacatccactagcaatagcaataacaatgcttcactccatgaagtc
aaagcaggtgtggttaacaatcaaagcaggccgcaaagtcacagcagtggagaatttagt
ctgttgcatgaacacgaggcttggtctagcagcagcagcagtcctattcagtatttgaaa
ggtcatacaaggtctagtcctgtgctccagcaaagaacacccgaaacactggatagtcgt
ggaaaacagatcaaaaacggttctcctggaagtgaagttgttaccctgcagcagttttta
gaagaaagcaacaaaagtacctcaagcgagatgaaatctgcaagtgaagagaatctttta
gatgaagtaatgaaaagtttatctgagtctgctgagctgacaggaaaggaaaagctaaga
aaacaggcatctgctggttgtggtattgtgaggtcgttaagcgtaaaaaatacagttgat
ttctcagatggacgatccattaaaccagaacaacttgtaaggcccagcttccgtaaaact
gaagatgcctactttactagctctccaataaaatttacatcaggcactcaagggaagacc
aaatcagttaaagaaaagatgcaagcaactgtatcacagcgacaatcaagagattgcaat
ccttatgctaccttacctcgtgcaagcagcgtaatttctacagcagaaggaactactcga
aggacaagcattcatgattttttgtctaaggatattaggcaacctgtttcagttgatcca
gcgccatccaccgctgacagaagcgttccagcaacatctagtgagtactcagcacatcag
ttatcccctaacgttttgcactgtgtggcttacagaatagattgtgttccacaaagtgat
gcagctaatacagttaaaccacgtaatttaggatgtaactttgatgtgcctaagactcca
aggatggaaaggtcaaattttcatgagaaaactttaagcacaaatgtgtttaatgataaa
gtcagtgtatctggcaatgatagcacaagatcatttactgtggctcatccatttttatcc
cttaacactgaattagttagtaatataagtggattgcctccaaggtctgcatcaaaaact
gatcaggcgaacctgtcaacatttagatctgtactgaaaagtcaagaacagccttcagct
aatcagaaatctgatcatagtgacctacggtcagctctaactagtgaatttgctcctacc
acctgtgtaaccactagtgaggctgaacccccgctgctcgtttctgaagataataaaact
gtgtggtatgagtatggttgtgtctga
DBGET
integrated database retrieval system
