Anser cygnoides (swan goose): 106042287
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Entry
106042287 CDS
T04896
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03008
Ribosome biogenesis in eukaryotes
acyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106042287 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
106042287 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyg03021
]
106042287 (XRN2)
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106042287 (XRN2)
03009 Ribosome biogenesis [BR:
acyg03009
]
106042287 (XRN2)
03016 Transfer RNA biogenesis [BR:
acyg03016
]
106042287 (XRN2)
Transcription machinery [BR:
acyg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106042287 (XRN2)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
106042287 (XRN2)
Ribosome biogenesis [BR:
acyg03009
]
Eukaryotic type
Pre-60S particles
RNases
106042287 (XRN2)
Transfer RNA biogenesis [BR:
acyg03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
106042287 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
106042287
NCBI-ProteinID:
XP_013046560
LinkDB
All DBs
Position
3:complement(10630351..10681760)
Genome browser
AA seq
949 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVSCVEEKAKECNGVKASVDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILSKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPTSEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KKKRMKRDHPSFIPGGQFSPQALGNRSSPQAISNPRQAAYEMRMHDRQNSTTSSPNTSLN
SDGSPSPAGGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQS
YVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFDGIADMPSDFEKGSKPFKPLEQLMGV
FPAASGNFLPPSWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAA
LEEVYPDLTPEENRRNSLGGDVLFVGKHHPLCDFIVEQYKSKNTEPVDIPPELCHGIQGK
LTLNENAVLPDQTVESPVPMLRDLTQNSAVSISFKDPQFDEDFVFKAAVLPGAKKPPPVL
KPGDWEKNNNDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHTMPRERGMPGMYANAVPLGA
YGSPYSRPLLSGQQQIPKLLSNLRPQDSWRGPTPLFQQTPQRTAGAAPLLAWNRMLPSQS
QYQPGQYQGLGGPMSYPQRPEDRMDRGRQAYGPGRPYPLPPPSGRYSWN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgccggccttctttcgctggctcagccgcaagtacccctccatcatcgtcagc
tgcgtggaggagaaggcaaaagaatgcaatggtgtcaaggcttcagtcgatacaagcaag
cctaaccctaatgaggtggagtttgataatctatatttagacatgaatggtataattcac
ccttgtacacatccagaagacaagccagcacctaaaaatgaagatgaaatgatggttgcg
atttttgagtatattgacaggatattcaacattgtacgaccaagacgacttctctacatg
gctatagacggagtagctcctcgtgcaaaaatgaatcaacagcggtcaagaagattcaga
gcatcaaaggagggcatggaagctgctgaagagaagcaaaaaatacgacaagaaattctg
tcaaaaggtggcattcttcctccagaagaagtgaaagaaagatttgacagcaactgtatt
acccccggaactgagtttatggacaatcttgctaaatgtctccgctattacattgctgac
cgtttgaacagtgacccggggtggaaaaatttgacagtaattttgtctgatgctagtgct
cctggtgaaggagaacataaaatcatggattatattagaagacaaagagctcaaccaaac
catgacccgaatactcatcattgtctgtgtggggctgatgctgacctaattatgctcggt
ttagctacacatgaaccaaatttcaccataattagggaagagtttaaaccaaataaaccc
aagccatgtgctctttgtaaccagatgggtcacgaggttaaggattgtcaaggtttgcct
agagaaaaacaaggcaagcatgatcagtttgcagacagtcttcctacttctgaacaagaa
tttatcttcatccgattatgtgttttgcgagagtatttagaaagagaactcactatggcc
agcttgcctttcacctttgattttgaaagaagtgttgacgactgggtcttcatgtgcttt
tttgttggaaatgactttcttcctcatctgccatctttagagatcagggagggagcaatt
gatcgcttggttaacatatataaaaatgtggtgcacaaaactgggggctacctcacagaa
agtggttttgttaacctgcagcgagtccagatgatcatgttagctgttggagaagtagaa
gatagcattttcaaaaagagaaaagatgacgatgataacttcaaaagacggcaaaaagaa
aaaaagaaaagaatgaagagggatcatccttcttttattcccggtggtcagttttcccct
caagctctgggaaatcgatccagtcctcaagcaatcagtaaccctagacaagctgcctat
gagatgagaatgcatgacagacagaattctacaacttcatctccaaataccagtctcaat
tctgatggctccccatccccggcaggaggaattaagcgaaaagctgaagatagtgacagt
gaacctgagccagaggataatatcaggttgtgggaaactggttggaagcaacgctactat
aaaaacaaattcgatgttgatgcatctgatgagaaatttcgtcgtaaagttgtacagtcc
tatgttgaagggctttgctgggttctcagatattattatcagggctgtgcctcctggaac
tggtattacccttttcattatgctccgtttgcttctgacttcgatggtattgcagacatg
ccctcggattttgagaagggctcaaagccgttcaagcctcttgaacaacttatgggagta
tttccagctgcaagtggaaactttctgccaccaagttggaggaagctcatgacagatccg
gaatcaagcataattgacttctaccctgaagattttgctattgacttgaatgggaaaaaa
tatgcttggcaaggtgttgcattattgccgtttgttgatgagcgacgccttagagctgcc
ctggaagaagtctatcctgacctcactcctgaagaaaacagaagaaatagcctcggtggg
gatgttctctttgttggaaaacaccatccactttgtgactttattgtagaacagtacaag
tccaaaaatacagagccagtggatataccaccggagttgtgtcatggaatccagggaaag
cttacactgaatgaaaatgctgttcttccagatcagactgtggagtctcccgttccaatg
ctgcgtgatcttacacaaaattctgcagtcagcatctctttcaaagatccacagtttgat
gaagactttgtttttaaggctgcagtgttacctggtgcaaagaaacctcctccagttctg
aagccaggagactgggaaaaaaacaacaacgatggcaggccttggagaccgcagcttggt
tttaatcgagacagaaagccagtccacttggaccagtcagcgtttagaactttaggccat
acaatgccaagggaaagagggatgccaggaatgtacgccaatgctgtacctcttggagct
tatgggagcccctacagcagaccacttctgagtgggcagcagcagattcctaaattgttg
tcaaatcttagaccccaagactcttggcgaggccctacacctttgtttcaacagacacca
caaagaactgctggggctgcccctctgcttgcctggaaccgcatgctgccatcccaaagt
cagtaccagccaggtcagtaccaagggctgggtggaccaatgagttacccgcagagacct
gaagatcgaatggacaggggaagacaggcatatggccccgggaggccctacccgctgcca
cctccctcaggaagatacagctggaattag
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