Anser cygnoides (swan goose): 106042629
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Entry
106042629 CDS
T04896
Symbol
HPS5
Name
(RefSeq) BLOC-2 complex member HPS5
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106042629 (HPS5)
Membrane trafficking [BR:
acyg04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
106042629 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
PEP5_VPS11_N
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
106042629
NCBI-ProteinID:
XP_013047120
UniProt:
A0A8B9E1Z2
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All DBs
Position
5:complement(36940608..36959998)
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AA seq
1143 aa
AA seq
DB search
MSEYCQPYASMASAPVIPDSYNHVLAEFECLDPLLSALRLDSSRLKCTCIAVSRRWIALG
SSGGGLNLIQRDGWKQRLFLTHKEGAISRVACCLHDEDYVAVATSQGLVVVWELNQERRG
KPERIYVSSEHKGRKVTALCWDTAALRVFVGDHVGKVSAIKINTSKQGKAAATFVMFPVQ
IITTVDSRVVQLDYLDGRLLISSLTRTYLCDTEREKFWKIGNKERDGEFGACFFPVGKNN
GNQQPLIYCARPGSRMWEVNFDGEVQSTHQFKQLLSSPPLPVVTLRMDPHCTTSSCSPQS
LSFPKLLYLTEHYVVTWTERGIYIFVPQSVQVLLWSEVKDIQDIAVYKSELFCLHANGKV
VHLSLLLVDRCVDRLIRRGFWTLAARVSCLFQNSIISCRARKNLPLDKLEHLKSQLDAST
QQDLISRLEELILKVEPLDSACSSRRSSISSHESFSVLDSGIYRVISRRGSQSDEDSCSL
HSQTFSEDERLKEFPAHQEDEQVELDSVSHASVAVEADRSETFLPFSIPLSFRSPSPLVS
LQAVKESVSSFVRKTTEKIGTLHVSPDIRGRQEAKDDEQQQEVAVSLLASPQEERASEPQ
SCQLPEEDHLRDLKAATTEAVAKLQDPLVLLEPQCMRRVLREWLVYLEEKFGSREHFDSS
VRKSKTVCAEEQREVLEENLQVNPTGGDLAEKEPNSILEDYTESNDETCESQNVCENSTN
FKGPLGGCFQISPPCDLEPDVQKDLVELTTLCFELSVFSCGNGDSEESFDQGLPLAALST
LACRFIQNYFFLLDLKRLKQCIITTYANSPNVWETYIAGLKELTCHSSVALAMENEDMLK
ILKLLHDLGPWNDGPLLLVHAQRLYEKFGETALRPLIKFHPSILPSDIKQLCKNDPAHFL
AYLDSLVKSQPEDKRSSLLRSLLQPESIRLDWLCLAVSLDAPQRANTVDVEGNPRPRSHL
FTWGYSQLILLLVKLPADFVTKEKMADICKSHGFWPGYLFLCLELDRRIEAFTNIAHLDD
LSLLNEEDGSIPETIEEWKFLLHLAQNHSAVFHHHGPQNGNAVSNGIPSWPNCITVENIA
LLLAKAIGPNRALPLLQECGVMLELSDRFTGVCEILRIAEKRQRALIQSMLDRCDRFLWS
QQA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtactgccagccttatgcatctatggcctctgcgccagtcattccagactct
tacaaccatgtcctggcagagtttgaatgtttggatccgttgctttctgcgctcaggctg
gattctagtcgtctgaagtgcacgtgtatagctgtgtcgaggagatggatagctctaggc
agctcaggaggaggactgaatcttatacagagagatggttggaagcaaaggctctttctt
actcataaggaaggtgccatttcccgagttgcctgctgtttgcatgatgaagactacgtt
gctgttgccaccagccaaggtctcgtagtagtctgggagctgaatcaggaacgtcgtggg
aaaccagaacggatttatgtttcctctgagcataagggcagaaaagtcacagctctatgt
tgggatacagcagccctccgtgtttttgtaggagatcatgtgggaaaagtatcagccatc
aagattaacacatcaaaacaaggaaaggctgctgccacttttgtgatgtttcccgttcag
attataaccactgtagattcccgtgttgttcagctcgattatttggatggaagactgctc
atatcttcacttacacgtacttatttgtgtgatacagagagagagaagttttggaaaatt
ggtaacaaagagagagatggagaattcggagcatgtttcttccctgttggaaaaaacaac
gggaatcagcagccactcatatattgtgcgcggcctggctcaaggatgtgggaagtgaac
tttgatggggaagtgcaaagcacgcatcagttcaagcagctgctctcatcaccgcctctc
cctgttgttactctcaggatggatcctcactgcacgacttccagctgctctccacaatct
ttatctttccccaagctactgtatttgactgagcactatgtcgtgacctggacggaaaga
ggcatttatatctttgttccccaaagtgttcaagtcttactctggagtgaagtaaaagat
attcaggatattgcagtttacaaaagtgaactgttctgtcttcatgcaaacggaaaagtt
gtacacctttcccttctgctagtagaccgctgcgtagatcgtctgataagaagagggttc
tggactcttgctgccagggtctcttgtctcttccaaaattcaataatttcttgcagagca
agaaaaaatttgccactagacaagctggagcatttgaagtctcagctggatgcctcaact
caacaggatctcatttcacgtctggaggaactgatcttgaaggtggaacctctagattct
gcgtgcagcagtaggagaagtagcatttcatctcatgaaagcttcagtgtcttggactct
ggtatatatcgtgttattagtcgaagaggcagtcagtccgatgaagactcatgttctctc
cacagtcaaacattctcagaagatgagagacttaaagaatttcctgcacaccaggaagat
gaacaggtggaacttgacagcgtatctcatgcatctgtggcggttgaggctgaccggagt
gagacattcctcccattcagtattcctttgtcatttcgttccccatctcctctcgtctct
ctccaagctgtgaaagaaagtgtttccagctttgtacgcaaaactaccgaaaagattggc
acacttcatgtgagtcctgatattagagggaggcaagaagcaaaggatgacgagcagcag
caggaggtggctgtcagtcttctagcatctccccaggaagagagagcatcagagccacag
agctgccagcttccagaggaggatcatctaagagatctcaaggctgcaacaacagaagct
gtagccaaactccaggatcccctggttttgttagaaccacagtgcatgagaagggtttta
cgggaatggcttgtctatctggaagaaaaatttggcagcagagagcattttgattcctct
gttaggaagagcaagactgtatgtgctgaagaacagagggaagtcctggaggaaaacctg
caagtaaatccaactggtggagacctagcagaaaaagaaccgaatagtatcttggaagac
tacactgaaagtaatgatgaaacttgtgaaagccaaaatgtatgtgaaaatagcactaat
ttcaagggacctttgggtggctgctttcaaatatctcctccatgtgacctagaaccagat
gttcagaaagatcttgtggagctgacaactctgtgttttgagctgagtgtattttcttgt
ggaaatggtgattcagaggaaagctttgatcaaggtctgccactagcagctttgtcgacc
ttggcttgtaggtttatacaaaactacttctttcttctggatttgaaaagactaaagcag
tgcattataaccacatatgcaaacagccctaatgtatgggaaacatatatcgcaggattg
aaagaactaacttgtcacagttcggttgctttggcaatggaaaatgaagatatgttgaaa
atactgaaactgttgcatgacctggggccctggaatgatggccctctgctactggtacat
gctcaaaggctttatgaaaaatttggtgaaacagctcttcggcccttgatcaagttccac
ccctccattttgccttctgatatcaagcagctttgtaagaatgatccagctcacttctta
gcatatttagatagcctggtgaagtcacagccagaggataaaaggtcatctcttcttagg
tctcttctgcagccggaatcaatacgactggattggttgtgcttggcagtttctcttgat
gcaccacaaagagcaaatactgtggatgtggaaggaaatcccaggccacgatcgcatttg
tttacatggggctacagccagctcattctgcttttggttaaactcccagctgattttgtt
acaaaagagaaaatggcagacatctgtaaatcacatgggttttggcctgggtaccttttc
ctctgtttggagctggacagaagaatagaagcctttactaatattgctcatttggatgat
ctgagcctattgaatgaagaagatggttcaattccagagaccatagaagaatggaagttt
cttctgcatcttgcacaaaatcacagcgctgttttccaccaccatggaccacagaatggg
aatgctgtcagcaatggtatccccagctggccaaactgcatcactgtggaaaacatagct
ctcctattagcaaaggccattggcccaaatcgtgccttgcctctattgcaagaatgtggc
gtgatgctagaattgtctgacagatttactggagtgtgtgagatactgcgaattgctgag
aaaagacaaagagccctgattcagtccatgttggacaggtgtgaccggtttttgtggtct
cagcaagcatag
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