Anser cygnoides (swan goose): 106042875
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Entry
106042875 CDS
T04896
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X2
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04140
Autophagy - animal
acyg04148
Efferocytosis
acyg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106042875 (VPS41)
04148 Efferocytosis
106042875 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106042875 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106042875 (VPS41)
Membrane trafficking [BR:
acyg04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
106042875 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
zf_RING_Vps8_fungal
Beta-prop_EML_2
Beta-prop_HPS5
zf_RING_Vps8
Vps39_1
ANAPC4_WD40
TPR_PEP5_VPS11
WD40_WDHD1_1st
zf-RING_5
Beta-prop_RIG_2nd
Beta-prop_IFT140_2nd
zf-RING_11
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106042875
NCBI-ProteinID:
XP_013047501
LinkDB
All DBs
Position
2:61792912..61905870
Genome browser
AA seq
861 aa
AA seq
DB search
MTAAGRAMAEAAEKESGYNEESTDESEEDESEEEPKLKYERLSNGVTEILQKDAASCMTV
HEKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGL
YSAEEFHETFDCPIKIVAVHPHFVRSHFKQFVTGGKKLLLYERGWMNRWKSSVLHEGEGN
IRNIKWRGHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNLTLIIG
WGNSVKICSVKERHASEMRDLPNRYVEIVFQFDTEFYISGLAPLCDQLVILSYVKEILEK
TEVECCARPRLDIVQPLPESCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIISPRD
VVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILDIGLAYINHLVEKGEYDL
AARKCQKILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPVLKPLIYEMVLHEFLESDY
EGFATLIKEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRTLAELYTYDQRYGRALEIYLT
LRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIDRVVEELENRPEL
QHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFV
EETVYLLSRMGNSRSALKMIMEELQDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGL
LNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLK
KMHRTQMKGVLVDEENICESCLSPILPSDASKSFNVVVFHCRHMFHKECLPVSNTVSSVQ
FCNICSAKHRGPGSAILEMKK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgctggccgcgccatggcggaagccgcggagaaggaaagtgggtataatgaa
gaatcaacagatgaatctgaggaagatgagagtgaagaagagcctaagctgaagtatgaa
cggctttctaatggagtgactgaaattctacagaaggatgcagccagctgcatgacagtg
catgaaaagtttttggcactgggaacgcattatggcaaagtttatttacttgatgtccag
gggaacatcacacagaagtttgacgttagcccagtgaagataaatcagatcagtctggat
gaaagtggagaacacatgggtgtttgctcagaagatggaaaggtgcaggtgtttggattg
tattcagcggaagagtttcatgaaacgtttgactgtcctattaaaattgttgctgttcat
cctcattttgtaagatctcacttcaagcaatttgtaacaggaggaaaaaagttgctgcta
tatgagagaggctggatgaatagatggaagtcttcggttttacatgaaggggaaggaaac
ataagaaacataaaatggagaggacacttaattgcttgggccaataatatgggcgtgaag
atacttgacatgatttccaagcaacgaattaccaatgtgcctcgagatgacataagcctt
cgccctgatatgtacccctgcagcctttgctggaaggataatttaacgctgattattggc
tggggaaattcagtaaagatttgctcagtaaaggagcggcatgccagtgaaatgcgtgac
cttccaaaccgctacgtggaaatagttttccagttcgatactgagttttatatcagtggg
ctcgcacctctttgtgaccagcttgttatactttcatatgtaaaggagattttggaaaaa
acggaggtggagtgttgtgcacggcccagactggacatcgtacagcccctgcctgagtct
tgtgaagagatttcttctgatgcactaacagtacgaggatttcaggaaaatgaatgtaga
gattatcatttagagtattcggaaggtgaatcacttttttatatcatcagcccaagagac
gtggttgtggctaaagagcgggaccaagatgaccacattgactggcttctggaaaagaag
aaatatgaagaagctttgatggcagctgagatcagtcagaaaaccataaaaaagcacaag
attttggacattggcttagcctatataaatcacctagtagagaaaggagagtatgatctg
gctgctcgaaagtgccagaaaattcttggcaaaaacacagaactctgggaatttgaagtt
tacaagtttaaagaaataggtcagcttaaggcaattagtcgttacttgcccagacgggat
ccagttttgaaacctcttatctatgagatggtcctgcatgagtttttggagagtgactat
gaggggtttgcaacactgataaaagagtggcctggagatctctacaacaacacaatcata
gttcaagctgtagtagatcacctgaagaaagatccacagaacaggactttgctaagaaca
cttgcagaactgtatacttatgaccagcgctatggcagagccctagaaatttacctaact
ctgaggcacaaagatgtcttccagttgatccacaagcacaatcttttcagttccatcaaa
gataaaatcgttctgctcatggattttgattcagagaaagcagtagacatgcttttggac
aatgaagataaaatttctattgacagagttgttgaagagttagaaaacagacctgaacta
cagcatgtgtatttgcacaagcttttcaaaagagatcaccataaaggacaacgatatcat
gagaaacagatcagcctttatgctgaatatgatcgtccaaatttactaccatttctcaga
gacagcacacactgtccactagagaaggctctagagatctgccaacagaggaactttgta
gaagagacagtctatcttctgagtagaatgggcaatagccgcagtgccttgaagatgata
atggaagaattgcaagatgtagataaagctattgaatttgccaaggaacaagacgatgga
gaactttgggaagatctaattttatattctatcgacaaaccaccttttattactggtttg
ttgaacaatattggaacacatgttgatcccattcttttgatccaccgcattaaggaaggc
atggagattcctaatttgagagactctctagtgaaaattcttcaggattacaacttgcag
atcttgctgcgggaaggttgcaagaagatacttgttgctgactctctttctttgttgaag
aaaatgcatcgaactcaaatgaagggtgttctagtggatgaagagaatatctgtgaatca
tgcctgtctccaatacttccttcagatgcatccaagtccttcaatgtggtagtgttccac
tgcagacacatgtttcacaaagagtgtctcccggtatctaacacagtatcttctgtccag
ttctgcaacatatgcagtgccaaacaccgagggccaggaagtgcaatcctggagatgaag
aaatag
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