Anser cygnoides (swan goose): 106042913
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Entry
106042913 CDS
T04896
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X2
KO
K18752
transportin-1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106042913 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106042913 (TNPO1)
03009 Ribosome biogenesis [BR:
acyg03009
]
106042913 (TNPO1)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106042913 (TNPO1)
Ribosome biogenesis [BR:
acyg03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106042913 (TNPO1)
Pre-60S particles
106042913 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
Cnd1
TPR_IPO5
IBN_N
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
CEP104-like_TOG
HEAT_Maestro
INTS7_N
HEAT_GCN1_C_2
UNC45-central
Dopey_N
SCD
ARM_TBCD
RTP1_C1
VPS15-like_hel
TPR_TTI1_C
HEAT_DAAF5
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
106042913
NCBI-ProteinID:
XP_013047547
UniProt:
A0A8B9DTS6
LinkDB
All DBs
Position
Z:complement(81026287..81084895)
Genome browser
AA seq
874 aa
AA seq
DB search
MASEFIRIDFTTTKSFSLQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNV
KAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPELLPKLCSL
LDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVA
CVNQFIISRTQALMMHIDSFIENLFALATDEEPEVRKNVCRALVMLLEVRMDRLLPHMIS
IVEYMLQRTQDHDENVALEACEFWLTLAEQPICKDVLCRHLTKLIPVLVNGMKYSEIDII
LLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDGIEDDDDDDDELDDDDTISDWNLR
KCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILVLGAIAEGCMQGMIPYL
PELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRV
QEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHL
NKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV
QKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCM
QDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEIS
IQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRP
WCTSLRNIRDNEEKDSAFRGICTMISVNPSGVVQDFIFFCDAVASWVSPKDDLRDMFCKI
LHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaattcattcgcatagatttcaccacaactaaaagtttctctcttcagaaa
ctagaacaactcaatcagtatccagatttcaacaactacctgattttcgttcttacaaag
ttgaagtctgaagatgaaccaacacgttccttgagtggtcttatcttgaagaataatgta
aaagcacacttccacaacttcccaaatggagtaactgacttcattaaaagtgaatgtctg
aacaacattggtgattcctctcccttgattagagctactgtaggcattctgataacaacc
attgcctcaaaaggggaattgcagaattggcctgaactcttaccaaagctttgcagcttg
ttggattctgaggattacaatacttgtgagggtgcatttggtgctcttcagaagatatgt
gaagattctgctgaaatattagatagcgatgtattggaccgacctttaaatatcatgatc
cctaaattcttgcagttcttcaagcacagcagtccaaaaataagatctcacgctgttgca
tgcgtcaatcaatttatcatcagcagaacacaagctcttatgatgcacatagattctttt
attgagaatctttttgcgctggctactgatgaggagcctgaagtacgcaaaaatgtttgc
cgcgctctggtaatgttgctggaagttcgaatggatcgccttcttcctcatatgattagt
atagttgagtacatgcttcaaaggacccaggaccatgatgaaaatgtggctttggaggct
tgtgagttttggctgactttggctgaacaacccatttgtaaggatgtcttatgtcggcat
cttactaagttgatacctgtgctggtgaatggtatgaaatattcagagatagatattatt
ttgctgaagggggatgttgaagaagatgaagctattccagatagtgaacaggacattaga
cctcgttttcatcgttcacggactgtggctcagcaacatgaagaggatggtattgaagat
gatgatgatgacgatgatgaacttgatgatgatgatactatttctgactggaatttaagg
aaatgttctgctgctgctctagatgtcctggccaatgtattccgtgatgaacttctgcca
cacatcttgcctcttttgaaggaattgctcttccatcctgaatgggtagttaaagagtct
ggtatccttgttcttggagcaattgctgaaggctgcatgcagggtatgattccgtatctt
cctgagctgatccctcaccttattcagtgcctctctgacaaaaaggctcttgtgcgttcc
attacatgctggactcttagtcgctatgcacactgggtagttagtcaacccccagacaca
tacttgaagccattaatgactgagttgctaaagcgtatcctggacagcaacaagagagta
caagaagctgcctgcagtgcctttgctactctagaagaggaggcttgtacagagcttgtt
ccttatcttgcgtatatacttgacactttggtcttcgcatttagtaaataccagcacaaa
aacctgctcattctttatgacgctattggaactctagcggattctgtaggacatcatcta
aataaaccggaatatattcagatgcttatgcctccattaatccagaagtggaacatgttg
aaggatgaagataaagatctcttccctttattagagtgcctgtcgtcagttgctactgcc
ttgcaatctggctttcttccatactgtgaacctgtgtaccagcgttgtgtaaatttggtg
cagaagacccttgcacaagccatgttgcacaatgctcaaccagaccaatatgaggctcca
gataaagacttcatgattgtggctcttgatttacttagtggtttagctgaaggactggga
ggcaacattgaacagctagtggcccgcagcaatatcctgacactaatgtaccaatgcatg
caggataaaatgcctgaggtacggcagagttcttttgcattgttaggtgatctgacaaag
gcatgttttcagcatgttaagccttgcatcgctgatttcatgcccatcttgggaaccaac
ctaaaccctgaattcatttctgtgtgtaacaatgccacctgggcaattggggaaatctcc
atccagatgggtatagagatgcagccttatattccaatggtgttgcaccagcttgtagaa
ataattaacagacccaacacaccaaagacgttgttagagaacacagcaataacaattggt
cgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcagtttataagaccc
tggtgcacctctctgcgaaacataagagacaatgaggaaaaggattcagcattccgtggg
atatgtaccatgatctcagtcaaccccagtggagtagtccaagactttatttttttttgt
gatgctgttgcatcgtgggttagcccaaaagatgatctccgagacatgttctgtaagatt
cttcatggatttaaaaatcaagttggggatgagaattggaggcgtttctctgaccagttt
cctcttcccttaaaagagcgccttgcagcttactacggagtttaa
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integrated database retrieval system
