Anser cygnoides (swan goose): 106043045
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Entry
106043045 CDS
T04896
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acyg03036
]
106043045 (SHOC1)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106043045 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
106043045
NCBI-ProteinID:
XP_013047761
LinkDB
All DBs
Position
Z:11431538..11480950
Genome browser
AA seq
1444 aa
AA seq
DB search
MFTALKYHSTDYLYESMARQKFSICRLSLCFPPCLQQHEKCHLTGLFADDKYRKPWTRVT
STQNTIAISVLDQWKKSLSVEDFLEKKPITSLEFHSNNELIEVIPSSNPFSQTDTEELYL
LNKNICMEESTQDKYLKADCASELKEQWQDLHVGDELIFVDNLENYHKKLPHSSALLDRL
KFFLVRDPLSDSEGQNLREENIFRELLTFHNEMEMQESKKELQAIKETFCTITLNDKEYF
MLPVELEFCKNSNSRSDSIKTPSYLELKELLNVAPETVADEGMCEEVIKEDLKAEISNKI
EVSKYCPIPGELCSSNSTSMLESCESATHVSYLQDEMEIPLTPLCRQQRSQVNCMCVGLQ
EEPIPLSGNSIFITESSREYLECLVWQSEKYRDNVSSLLLVEHQTFKLAYQHHSLAELKK
VLSIDIEAPMLISLEEDWWIHMGLSPACVDTLEQLNIDSSNTNSLLPTEVETFTQFKSYQ
LERWLEEKNSMTNQELFSAKRHQLDQVTNGTLPTNAASSVKIDSTTTFVEEFDGRSIQKS
KVEEKIYFLNQGKKTPKSLDSVSPKDVSFKEDNSSEAQKPASFTPATKWDNDDSDLSNFI
MLRSKHTVTQREEENDIDSPEKVLQPKEQHLPDHKEDSSVCESVTAEKEENESSITVKIQ
ASESQYQAYRLLEGAATPILKDLAHLGVLASISWSFDSIKFDHTRFFLKQQEKVICDHFK
EGKVDEKEITLFRHAALVHLLVTVRDLLLTCGLDTALGYLSKAKDIYKNILESCLDNIWR
QLKVVQYSSQKKHEISPRITELQRQMLNWMQSYGEERSAKILIITRMDSEREKAALVHTL
SRVEGLKAVDLNYKKNGTFLGCKDVVSNLSRYSCVIVQNQQIGADFPWTHFSLVIEYDYS
ENSCWKNRCENLNINYMTFKTTLPETRQMGNHCGSLLLEVQIPYVFLTTEGLLNMPDFLQ
LLESNYSITFVERSCSHSLRLFGDTDRYVVLTIDECTAIFLQNMDELNYEKSCDNIILKL
TALSLQYTCCWVVFYSRERLSLEYSFRGDTLLNLVIIYATLIELTQKSEDFEVKVCLTPG
IEEAALLIRLIADHVLMASSVSPLEWLDKSWLSVLPSEMEKCLLTFPCINPLVAQFMLKK
GSSLRRLFLASFVQLQELLPEVPKKVLKHFSDMTSMYSLNAAGPLKTAVKGASPPENWNN
INRLYPDCKQNYQSLELLAKAQTSTGPPHVNSEAVVPPPNHHHGLIDSDLSSYMQKKPCS
SEVVTGRKQNSFVVPKDCEGFTHPGAMNSLFVQRQPCRINCSSDHSSKKPEQEDFFATFI
DCAPQKNSKGLLEEFREMTFKSPEIVIDETPWNGFSSTCTYDSFAPNSFLSDSLADPDEP
QSLHFHQLGRESSGKRKQSPPYLWTKGKTLTDSGFEEVPGIKKRKLMYERVPGRSDGQTR
LKFF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagctttaaagtatcactcaacagactatttatatgagagcatggcaaggcag
aagttttccatctgtagattatcactatgctttcctccctgtttgcaacaacatgaaaag
tgtcatctgactggactctttgctgatgataagtataggaagccatggactagagttaca
tcaacacagaacacaattgctatttcagtgctggatcagtggaagaaaagtttatctgtg
gaggatttcctggaaaagaaacctatcacttctctggagttccatagtaataatgaattg
atagaagttattccaagttcaaatcccttctctcagactgacacagaagaactttattta
ctcaataagaatatctgtatggaagaatcaactcaagacaaatatttgaaggctgactgt
gcctctgaacttaaagaacaatggcaagatttacatgttggagacgaacttatttttgtt
gataatcttgaaaactaccataaaaagcttccacattcatctgcacttctggacagacta
aaattttttttagtgagagatcctctttcagattctgaaggtcagaatttaagagaagag
aacatttttagggaactcttgacttttcacaatgaaatggagatgcaggagagtaaaaaa
gaattgcaggcaattaaagagaccttctgtacaataactttaaatgataaagagtatttc
atgttgcctgttgagttagaattctgcaaaaacagcaacagcagatcagattccattaag
actccatcgtatttggaactgaaagagctgttaaatgtagctccagaaactgtggctgat
gaaggcatgtgtgaagaggtgatcaaagaagatcttaaagcagaaatttcaaacaaaatt
gaagtttccaaatactgtcctataccaggagagctttgctccagtaacagcacaagtatg
ttggaatcctgtgagtcagctacacacgtttcatatctgcaagatgaaatggaaatacct
ttaactcctctgtgcagacaacaaagatcacaggtgaactgtatgtgtgtaggacttcaa
gaagaacctattcctctttctggtaacagcatttttattacagagtcctctagggaatac
ttagaatgcctggtatggcaatcagagaaataccgggacaatgtgagctctcttttgctt
gtcgaacatcagacctttaaacttgcatatcagcatcattcgctcgcggaactgaagaaa
gtgctatcaattgatatagaagcaccgatgcttatctcactggaggaggactggtggatt
catatgggattaagtccagcctgtgttgatacgttggagcaattaaatatcgattccagt
aatacaaacagtttgcttcctacagaagtagaaacattcacacaatttaaatcgtatcaa
ctagaaagatggcttgaagagaagaattccatgacaaatcaggagctgttttctgccaaa
agacatcagttggaccaagtaactaatgggaccctgcctacaaatgctgcatcttctgtc
aaaattgacagtacaactacctttgtagaagagtttgatggaagaagcatacaaaagagt
aaggtagaagagaagatttatttcttaaaccaaggaaagaagacacctaaatcacttgat
tcagtcagccctaaagatgtatcttttaaagaagacaactcttctgaggctcagaagcct
gcatcattcacacctgctacaaaatgggacaatgatgattctgatctgagcaactttatc
atgctgagatctaaacacacggtcacccaaagagaggaagagaatgacatagatagtcct
gaaaaagtgctacaacccaaagaacagcacttgcctgatcacaaagaggacagttctgtg
tgtgagtctgtaacagcagagaaagaagagaatgagagcagcatcacagtcaaaattcaa
gcatcagaaagccaataccaggcataccgtctgttggaaggagcagccacccctatttta
aaggatttggcacatctaggtgttcttgcttctataagttggagctttgacagcataaaa
tttgatcatacaaggtttttcttaaagcagcaggagaaagtgatatgtgatcattttaaa
gaaggtaaagtagatgagaaagagatcacactgttcagacacgctgctctggtgcatcta
ttggtgacagttcgagaccttctattaacatgtggcttggacacagcgctaggatatttg
tctaaagcaaaggatatctataaaaacatcttagaatcctgtttggataatatctggagg
cagctgaaggttgtacagtacagcagccagaaaaagcatgaaatcagtcccagaataaca
gaacttcagcgtcaaatgttaaattggatgcaaagttatggagaggaacgcagtgctaag
atactaatcataacaagaatggactctgagagagaaaaagctgctctcgttcacacttta
tctagagtagaaggtttaaaagctgtcgatttgaattacaagaaaaatggaaccttccta
ggttgtaaagatgtagtaagcaacctcagtagatattcctgtgttattgtacaaaatcag
caaattggagctgacttcccttggactcacttctcattagtgatagaatatgattattct
gaaaattcttgctggaaaaatcggtgtgaaaatctaaatatcaattacatgacttttaaa
accaccctccctgaaacaagacaaatgggaaatcactgtggttcccttcttctggaagta
cagattccctatgtgtttctcacaactgaaggtcttcttaatatgcctgattttcttcag
ctgttggaatccaattacagcattacctttgttgaaagaagctgcagtcactccttaagg
ctatttggagacacagatcgatacgttgtgttgacaatagatgaatgcactgctatcttt
ttgcagaatatggatgaattaaattacgagaaatcctgtgacaatataatattgaagctg
acggcgttatcactccaatatacatgctgctgggttgttttctattccagagaaagactg
agtttagagtacagtttcaggggagatactctgcttaacctggtaataatttatgccact
ctgattgaattaacacagaagtcagaagactttgaagtgaaggtgtgtcttacgccaggg
attgaagaggcagcattgttaattcgtctgattgctgaccacgttttaatggcatctagt
gtcagtcctcttgagtggttggacaaatcctggctttctgttttgccttctgagatggag
aaatgcctgcttacttttccatgtatcaaccctctggttgctcagtttatgttaaagaag
ggatcttctttgagaaggctgtttcttgcaagttttgttcaacttcaggagctcctgcca
gaggttccaaaaaaagttttaaagcattttagtgacatgacatctatgtacagcctaaat
gctgctggtccactaaaaacagcagtgaaaggtgcatcacccccagaaaactggaacaac
attaacagactctatccagattgtaagcaaaattatcagtctttagagctgctggctaag
gcacaaactagcacaggaccacctcatgtgaattctgaagccgtagttcctccaccaaac
catcatcatggtcttattgactctgacctttcaagctatatgcaaaagaaaccatgttct
tctgaagtagttacagggagaaaacagaattcctttgttgtgccaaaggactgtgaaggt
tttactcatccaggtgctatgaattctttatttgttcaaagacagccctgcaggattaac
tgcagctctgatcattcctcaaaaaaacctgaacaagaggatttctttgcaactttcatt
gactgtgcacctcagaagaactctaagggccttctagaagaatttagagaaatgacattt
aagagcccagaaattgtgattgatgagaccccatggaatggcttttcatctacctgcaca
tatgattcatttgcacctaattcttttctctctgattcccttgctgatccagatgagcct
caaagtctgcattttcatcagctaggtagagaatcttcaggaaagagaaagcaaagtcca
ccatacttatggacaaaaggaaaaacattaacagattcaggatttgaagaagtaccaggg
atcaagaaaaggaaattgatgtatgaaagagtccctggaagaagtgatggacaaacacgt
cttaaattcttttga
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