Anser cygnoides (swan goose): 106043144
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Entry
106043144 CDS
T04896
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106043144 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106043144 (MSH2)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106043144 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
106043144
NCBI-ProteinID:
XP_047934401
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Position
3:complement(17910226..17945478)
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AA seq
936 aa
AA seq
DB search
MAVEAPREAVWPEGAGAEAGFVRAVLSLPEKPDTTVRFFERGDYYTAHGADARLAATELF
RTRAVIRQLAGAAGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSVKENDW
YLAYKGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSTADGQRVVGVGYVDTTLRKLSVCE
FPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVVQRGGILITDRKKAEFTTKDI
VQDLNRLLKSKKEEQINSAALPEMEKQVAISSLSAIIKFLELLSDESNFGQFELTTFDLS
QYMVLDNAAVQALNLFQSSVENANTTQSLSGLLNKCRTPQGQRLVNQWIKQPLMDKNRIE
ERLNLVEAFVVDPELRQGLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNV
VKALEKHEGTHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHEFLVKASFDPN
LTELREKMNELEENMQSFLQSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEKVLRNNS
KYKITDTQKNGVKFTNSKLSAVNEEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMND
VIAHLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIALKGARHPCIEVQDEVAFIPNDITF
EKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDS
QLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAF
CMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKAGVCDQSFGIHVAELAAFP
KHVIESAREKALQLEEFQNIGKSNESEGEPPSKKFYREREEGEKIIQDFLSQVKALPLTD
MSEEDIKIKLKQLRTDVLAKNNSFVNEIISRTKVTS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaggcgccgcgggaggcggtgtggccggagggcgcgggcgccgaggcgggc
ttcgtgcgtgccgtgctgtcgctgcccgagaagcccgacaccaccgtgcgcttcttcgag
cgcggcgactactacacggcgcacggcgcggacgcgcggctggccgccacagagctcttc
cgcacccgcgccgtcatccggcagctggcgggcgccgcgggaaatcagaaacttgaaagt
gttgtgcttagcaaaatgaactttgaatcttttgtaagagatctgctcctggttcgtcat
tacagagttgaagtttacaagaataaagcagggagtaaatctgtcaaagaaaatgactgg
tatctagcatacaagggttctccgggaaatcttgcccagtttgaagaagttctctttgcc
aacaatgatatgtcaatggctattggggttgtgggggtgaagctgtctactgctgatgga
caaagagttgtaggagtagggtatgttgacactacgctgagaaaattgagcgtctgtgaa
tttccagataatgatcagttctcaaaccttgaagctctactggttcagctgggacctaag
gagtgtgtgctaccaggaggagagactgcaggagagatgggaaaactgcgacaagtcgtt
cagagaggaggaatcctgattacagacagaaagaaggcggaattcacaacaaaagatatc
gttcaggatctcaatcgcttgctaaaatcaaaaaaagaagaacaaattaatagtgcagca
ttgccagagatggagaagcaggtcgctatttcatctttgtcagccattatcaagttttta
gagttgctgtcggatgagtctaattttggacaatttgaactgactacttttgatcttagt
caatacatggttctagataatgcggctgtccaagccctcaaccttttccagagttctgtt
gaaaatgctaatactacacagtccctatctggtttactaaataaatgcagaacccctcaa
ggacaaagactagttaatcagtggatcaaacagccacttatggacaagaatagaattgaa
gaaaggttgaatttggttgaagcctttgtggtagatccagaactacgtcagggccttcaa
gaagatcttttacgtcgctttccagatcttaaccggctggcaaagaaatttcagagacaa
gctgcaaccttacaggactgttatcgaatgtatcaggctattaatcaactgcctaatgtt
gtaaaagcactagaaaaacacgaaggaactcaccagatgttgttgttagcagtgtttata
acacctcttaatgatattcactctgacttctcaaagtttctggagatgatagaaacaaca
ttggatatggataaggtggagaatcatgaatttcttgtcaaggcttcttttgatcctaac
ttgacagaattaagagagaagatgaatgaactggaagaaaacatgcagtccttcttacag
agtgcagccaaagaattaggtttggaagctggcaaaagtattaaactggagtcaaattca
cagtttggacatcactttcgaattacttgcaaggaggaaaaagtcctccggaacaattca
aaatacaagataactgatacacagaagaatggtgtgaaatttactaacagcaaactgagc
gccgtcaatgaagaatatataaagaacagagaagaatatgaagaggctcaggacgcaatt
gttaaggaaatcattaatattgcttcaggttatgcagagccgatacagactatgaatgat
gtaatagctcatttagatgcaattgtcagttttgctcatgtgtcaaatggagcaccagtg
ccctatgtccgtcctgtcattttggaaaagggacaaggaaggattgcgctgaaaggtgcc
aggcatccttgcattgaagtgcaagatgaagtggccttcatccccaatgacattacgttt
gagaagggcaagcagatgttccacattattactggccctaacatgggaggaaaatcaaca
tacatccgacagacaggggtgattgttcttatggcccaaattgggtgttttgtaccctgt
gactctgcggaaataaccattgtggattgtatcctggctcgggtgggagctggagacagt
cagctgaaaggcgtgtctactttcatggctgaaatgttggaaactgcttcaatccttagg
acagcatctgaaaactccctaataatcattgatgagctgggaagaggaacttctacctac
gacggctttggcttagcctgggctatttcagaatacattgctagcaaaatctgtgctttt
tgtatgtttgctacgcattttcatgaactgacagcacttgctgatcaagtgccaacagta
aataacctacatgttactgctctaaccagtgatgacacactgacaatgctttaccgtgtc
aaggcaggtgtttgtgaccagagttttggaatacatgtagcagagttggcggctttccca
aaacatgtgatagaaagtgcaagagagaaagcactgcaactggaggagtttcaaaacatt
ggcaagtccaatgaatctgaaggagaaccaccatccaagaaattctacagagaaagagag
gaaggtgaaaagatcattcaggattttcttagtcaggtgaaagcattgcccctgacagat
atgtcagaagaagacatcaaaatcaagctgaagcagctgagaactgatgtgttggcaaag
aacaacagttttgtgaacgaaatcatttcccgaacaaaagttacatcatga
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