Anser cygnoides (swan goose): 106043185
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Entry
106043185 CDS
T04896
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04140
Autophagy - animal
acyg04148
Efferocytosis
acyg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106043185 (VPS16)
04148 Efferocytosis
106043185 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106043185 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106043185 (VPS16)
Membrane trafficking [BR:
acyg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106043185 (VPS16)
Hops complex
106043185 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
106043185
NCBI-ProteinID:
XP_066853090
LinkDB
All DBs
Position
4:complement(475110..483796)
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AA seq
838 aa
AA seq
DB search
MDCYTANWNPLGEEAFYRKSELYAMEWGLREELRDCLVAAAPYGGPIALLRNCARREKSP
GARPLLDTFSASGLLLASIPWKSGQVVQLGWTASEDLLCIQEDGTVLIYNLFCEFKRHFS
MGNEVLQNHVLEAKVFHTEYGTGVAILTGAHRFSLATNIDDLKLRRMPEVPGLQKPPSCW
AVLSQDRVTIVLLAVGQDLYLLDNTSCSVVTPPGMSPSAGAYLQMAVSFNYRCLALFTDT
GYIWMGLATLKEKLCEFNSSIRSPPKQMVWCMRPRSRQRAVVMAWDRQLMVVGNSTECIQ
FVLDEDSYLVPELDGVRILSRTSHEFLHEIPEASQEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIKDQKLLPEAVSQCIEAAGYEHEPETQKSLLRAASFGKCFIDKFPPESFVR
MCQDLRVLNAIRDYQIGIPLTFTQYKRLTIEVLLDRLVLRRLYPLAIRICEYLRLSEIQG
VSRILAHWACYKVQQKDKSDEEVAYAINQKLGDTPGISYSEIAARAYDCGRPELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVA
LSLYRQFCKHQERETLKDLYNQDDNHQELGNFHVHSSYSEKRIEGRVGALQNAVDEYYKA
KNEFAAKATEDQIKLLRLQRHLQEDFDKPYLDLSLHDTVSTLILDGHHKKAEQLYRDFKI
PDKRYWWLKINALATRGDWEEMEKFSKSKKSPIGYLPFVEIAVKHHNRYEAKKYAPRVTP
EQRVKAFILVGDLDQAADAAIEHKSEAEMNFVLSKCTPSTDASVVEKLNRARAQLLKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggccaactggaacccgctgggcgaggaggccttctaccgcaagtcg
gagctgtacgccatggagtggggcctgagggaggagctgcgggactgcctggtggcggcc
gccccgtacggggggcccatagctctgctccggaactgcgcccggagggagaagtcgccc
ggcgcccgcccgctgctggacacgttctcggcctcggggctgctcctcgccagcatcccg
tggaagagcggccaggtggtgcagctgggctggacggccagcgaggacctgctgtgcatc
caggaggacggcacggtgctcatctacaacctcttctgcgagttcaagcgccacttcagc
atgggcaacgaggtgctgcagaaccacgtcctggaggcaaaagtcttccacacggagtac
ggcactggcgtggccatcctcaccggggcgcaccgcttctcgctggccaccaacatcgac
gacctgaagctgcgcaggatgcccgaggtcccaggtctgcagaagcccccctcctgctgg
gccgtgctgtcccaggacagagtgaccatcgtcctgctggcggtcggccaggacctgtac
ctgctggacaacacctcctgctccgtggtgaccccccccggcatgagcccctctgccggc
gcctacctgcagatggccgtgtccttcaactaccgctgcctggcgctcttcaccgacact
ggctacatctggatggggctggccacgctgaaggagaagctctgcgagttcaacagcagc
atccgatctccgcccaagcagatggtttggtgcatgcgtccccgcagccggcagcgcgcc
gtggtgatggcgtgggaccggcagctgatggtggtcgggaactccacggagtgcatccaa
tttgtcctggatgaggactcctacctggtgccagaactggatggggtccggatcttgtcc
cgcacctcccacgagttcctgcacgagatcccagaggccagccaagagatcttcaaaatc
gcctccatggcaccaggggctctcctgttagaggcgcagaaggagtacgagaaggagagc
cagaaggcagacgagtacctgcgggagatcaaggaccagaagctgctcccggaggcggtg
agccagtgcatcgaggcggctggctacgagcacgagccggagactcagaagtccctgctg
cgggcagcctcctttgggaagtgcttcatcgacaagttccccccggagagctttgtgcgc
atgtgccaggacctgcgggtgctcaacgccatccgggactaccagatcggcatccccctc
accttcacccaatacaagcggctcaccatcgaggtcctgctggacaggctggtcctgcgg
cgcctctaccccctggccatcaggatctgcgagtacctgcgcctctcggagatccagggc
gtcagccgcatcctggcccactgggcctgctacaaggtgcagcagaaggacaagtctgac
gaggaggtggcctacgccatcaaccagaagctgggggacacgccgggcatctcctactcc
gagatcgccgcccgggcttacgactgcggccggccggagctggccatcaagctgctggag
tatgagccgcgctccggggagcaggtcccgctgctgctgaagatgaagcggagcaagctg
gccctgagcaaggccatcgagagtggggacacggacctggtctacacggttgtgctccac
ctgaagaacgagctgaatcgcggcaccttcttcatgacgctgcagaaccagccggtggcc
ctgagcctctaccgccagttctgcaagcaccaggagcgggagacgctgaaggacctgtac
aaccaggacgacaatcaccaggagctcggcaacttccacgtccactccagctactcggag
aagcgcatcgaagggcgagtaggagccctgcagaacgctgtggacgagtactacaaggcc
aagaatgagtttgctgccaaggccacagaggatcagatcaagctcctgcggctccagcgg
cacctccaggaggacttcgacaagccctacctcgacctctcgctgcatgacaccgtctcc
accctgatcctggacggccaccacaagaaggccgagcagctctaccgggacttcaagatc
cccgacaagcgctactggtggctgaagatcaacgccctggccacgcgcggggactgggag
gagatggagaagttctccaagagcaagaagtcgcccatcggctacctgcccttcgtggag
atcgctgtgaagcaccacaaccgctacgaggccaagaagtacgcgccccgcgtgacgccc
gagcagcgggtcaaggccttcatcctcgtgggggacctggaccaggcggccgacgctgcc
atcgagcacaagagcgaggcggagatgaacttcgtcctgtccaagtgcacccccagcacc
gacgccagcgtggtggagaagctgaaccgggcccgggcccagctcctgaagaagtga
DBGET
integrated database retrieval system
