Anser cygnoides (swan goose): 106043247
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Entry
106043247 CDS
T04896
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04140
Autophagy - animal
acyg04142
Lysosome biogenesis
acyg04145
Phagocytosis
acyg04148
Efferocytosis
acyg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
106043247 (VPS18)
04142 Lysosome biogenesis
106043247 (VPS18)
04140 Autophagy - animal
106043247 (VPS18)
04148 Efferocytosis
106043247 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106043247 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106043247 (VPS18)
Membrane trafficking [BR:
acyg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106043247 (VPS18)
Hops complex
106043247 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
aq_1631
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
Lact-deh-memb
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
Nup54_57_C
DUF8221
LETM1_C
STX17_N
DUF5600
zf-rbx1
RBSN_mid
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
106043247
NCBI-ProteinID:
XP_013048052
LinkDB
All DBs
Position
5
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSAAVQQSRAAVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEARVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKARTLSRWKGHLIESVGWNKFLGTETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPASFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGNLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNEQVVFQDLFL
EKFGTLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSSL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKGHHRPKDADTASLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggactccctgcaccgctccgccgccgtgcagcag
agccgcgccgccgtgggcatcccgcactccgggtatgtgaatgcacggctggagaaggaa
acaccaatatttaacaagcaaagaattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaggatgaagccagagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagcgcggacactctcccgctggaaaggccac
ttgattgaaagcgtgggctggaacaaatttcttggtacggagaccaacactgggcctatc
ctggtgggaacagcccaggggcaaatctacgaagccgaaatatctgtcagcgagggaagc
ctcttcagcactaatcctgaccagtacttccgacaggtctacactctggaggaggaatca
ggacccgcaccagtctgctgtttggagattgaacgaggaatagaagggaaattttttatt
atcgccaccactcgaaagagactcttccagtttgttggcaaagtgcctgaagggacagag
cagcaaggcttcagctccatatttgctatgcatgctgaccatttgcccagcttccgggag
tttccagccagcttcggtttcagcgagatagccttttacactccaaaactgcgttccaac
ccacgctcctttgcgtggatgatgggaaatggtgttttgtatggtaatttggattatagc
cgtcctgattcaattctgagtgatgaacgggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtacttacccagtttcactttctgttgctgctgcct
gaccgggtgaaggctgtatgcactctgaatgagcaggttgtttttcaagacctgttcctg
gagaagtttggcacattgacacgcatgatcaaggatcccacagtccagcagatatggatc
cacacggagaaagtagtgttccgctatcacgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagctaaagaatattgtaaagaccgtccggag
tgcctagacattgtgttggcaaaagaggcagagcactgcttccaaaacaagagatatctg
gacagtgccaaatgttacgcgctgacccagaactactttgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtagcttg
aagccttctgagaagacacagaccactcttctgaccacatggttaacagagctgtacctg
aactggctgggtatattggaaggagatccctcacagcgaaatctctatttggatacacga
gagaagtttcgcaccttcttgagcagccctaaaaacaaagactgtctgtttaataatcgg
gcgtctatttatgaactgttggcgagccatggggacacggagcacatggtctactttgca
gtcatcatgcaggactatgagcgagtagtagctcaccactgccagcatgatgagtatgat
gaagctctaaacgtgctgtctaggcacagagatgagaagctgttctacaagttctcccca
gtcctcatccagcatattcccaagaaggtcgttgatgcttggatttctatgggctccagg
cttgatgccaggaacctcattccagcccttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatacatggagttctgtgtctatcagttggaggaaacccag
caagctattcacaactacttgttgtctctctatgctttgtgtcggccagattcgctgcta
tcatacctggagcaagcaggaaccaacccaaacaggatccactacgacctgaagtacgcg
ctgcgcctgtgtgcagagcatgggcaccaccatgcgtgtgtccatatttacaaagtgatg
gaattatatgaagaagctgtggatcttgcattacaggtggatgttgatctcgccaagtcc
tgtgcagatctccctgaagatgatgaggaactccggaagaagctgtggttgaagattgct
cgccatgttgttcaagaagagaaggatgtcaagaaggcaatggcttgcctctccagctgc
gccctgctgaagattgaagatgtcctgccattctttccagacttcgtcactattgaccat
ttcaaggaagcaatctgtaactctctggaggactacaacaagcacattgaggagttgaaa
agggagatggaggaagccacgcagagtgccaagagaattcgagaggacatccaggaaatg
agaaataagtacggctctgttgagcctcaggaaaaatgtgctgcttgtgactttccactt
ttaaaccgcccattttaccttttcctttgtggtcacatgtttcattatgactgtctcctt
caagcagtttttccaaaccttcctgcctataagcaggcaaagcttgaagatcttcagaag
aagctggcagctaccagtcagccttccaagggccaccatcgtcccaaggatgcagatact
gctagcttgggaaaggggcagcagagccgggaacaaatcaaagctgacattgatgatatt
gtggcagccgagtgtgtgtactgtggagaactgatgatccggtccattgacaagcccttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
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integrated database retrieval system
