Anser cygnoides (swan goose): 106043697
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Entry
106043697 CDS
T04896
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform X2
KO
K12600
superkiller protein 3
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106043697 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106043697 (SKIC3)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
106043697 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_16
TPR_12
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_9
ANAPC3
TPR_15
ARM_TT21_C
Fis1_TPR_C
TPR-S
BTAD
TolB_N
ARM_TT21
TPR_5
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
106043697
NCBI-ProteinID:
XP_013048756
LinkDB
All DBs
Position
Z:1443165..1491949
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVKGDLADVYKKLLELYGSGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLITIKREEGAEKAELHQLWKRMIQLLGDSAQSQDNKTLQ
MLLNAFEEAVNSADPVPSEDHQNLYKDFIQCLSKFPHETTKLEKACDDMMALYPTVSYPL
EVLCLHFIESGVVSEEALHRFSKLLEMDSSSGPGIVGFGIKCLQEKKYEEAVKSLTEGLK
KASQCLGAWHYLAEAQMKIHKHRNAVLSCNQALKNLGNPESPTLQQKKDRILQLKAEALI
KIGDADAAEEAINALEQIVGASSDPVVLAFRGRAYLNKGLVDQASKISQELLLSHPDLAE
AHALEGFIHYSQKKYEQAERSFQNAIERRAGTAEYHQYLGLTYWFMSDETKKDKGKTLTH
FLKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTAAVDLSVEL
GDMDTALSILNEVTEKANAGTVKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCW
ESLGEAYFGRGSYATALKAFKKASELNPELVYSIYRAAAVEQILGKHENAIATYQEILKK
TEEYVPALKGLGECYLMLAKSALDKYLDRKAVDYIEQALEFFTRATKHRPDISSLWKLLG
DTCTSVHVISPAKVNVQVLGLLLGKNEGKQMLKKNELLRLGGRCYGRALKLMPLPNIWCD
LGINYYRQAEHLTAVDADMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIG
NYALAQHSFIKSVQAEQINVVAWTNLGVLYLVTGNIEQAHEAFKVAQSLEPSYLLCWIGQ
ALIAEKVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKDNRNTEVYLYNIVQMNA
IPAAQVVMTKYTERNPDDASAFTMLGYLSEYMDLKRQAKDAYERAASLLKNSEDTEKYNI
AMQNYGRSLCAIGECDKAIEVYTSIPLTDFDGIVGIALAYFKKGLLQESIKAYEKALSVA
ESEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKVLCTLGLVKQDVTLAT
AALKELLKHEKGKDGIYERCLIASGVYALQGRNVAVQREVSKAIHSNPDNPALWSLLSRL
VPLYTLQKSKGGAMAGNIAHALDSSYGKEVLLNVAVNQLAAGCHMLKDQRENPLKNIQKA
IHLCPDNPAAWAVLMAACHAENTVVCLNNTQPKRTGLEMTLVSTISAKTRENNLPRNYIQ
TLEDWSLCQAITSLEETGRISEAEALCTKGLKSCPEHPGLFLLLRQVQCRQLLQTHKELP
DTILEELRKTVMTSSSVAAWQWLAKVYQSQGMMVGAEMCYRKSLQLASQQGSWSGKLSSL
LRLAMLALEICMANVPNEHWPSLVQEATTEALKLSPCPLASLLQALLQYNRKMGARETRR
MLERVVYQPGNPESIVSVARWYLLQHLYAKDDYELIDVLVENAKANGDVRALELNKKLSS
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaagcagcattaaagagtgctagagaagccataagaaataaa
gaatataaggaagccttaaaacattgcaaggcagtcttaaagcaagaaaaaaataactac
aatgcctgggtatttattggcctggcagctgctgagctagaacagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagctgctggcgtggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacttagcagatgtttat
aaaaagctcttggaactctatggaagtggagacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaactatatcatcaagaaaagaaatatttagaggtggctgaaacatggcag
aaactaataactataaaacgggaggaaggtgcagaaaaagcagagcttcatcagctttgg
aaaaggatgatccagttactgggagacagtgcacagagccaggacaataagactctgcaa
atgcttttgaatgcatttgaggaggcagtgaactctgctgaccctgttcccagtgaagac
caccaaaatctttacaaagactttattcagtgcctgtcaaagtttcctcatgaaacaact
aagttggaaaaggcctgtgatgacatgatggctttatatcctactgtgagctatcctttg
gaagtactttgcttgcactttattgagtcaggtgtcgtgtcagaagaggccctgcaccgt
ttttctaagcttttggagatggactcaagtagtggtccaggcatcgttggttttggtata
aaatgcctccaagaaaaaaaatacgaggaggctgttaagagtcttactgaaggtttgaag
aaggcgagccagtgtctgggagcatggcattatttggcagaggcacagatgaaaattcac
aagcacaggaatgctgtcctgtcctgtaatcaagctctcaagaatcttggaaatcctgag
agtcctactcttcagcagaagaaggaccgtattcttcagttgaaagcagaggctttgatt
aaaataggtgatgccgatgctgcagaagaagccattaatgcacttgagcagattgtgggt
gcaagcagcgatccagtggttttagctttcagaggtcgggcgtatctaaacaaaggttta
gtggatcaagcttcaaagatttcacaagagcttctgttgtcacaccctgatctggctgag
gcccatgctcttgagggtttcatccattattctcaaaagaagtatgaacaggcagaaagg
agttttcaaaacgccattgaaagaagggctggaactgcagagtatcatcagtacctgggg
ctcacctattggttcatgagtgatgagacaaaaaaagacaaaggaaaaacactcactcac
ttcttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaac
tactacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggctttt
gaactggatggaactgatgaagagtctggaacagcagctgtagacttaagtgtggaactt
ggagacatggataccgctctgtcaatcttgaatgaagtaactgaaaaagcaaatgctggt
acagtaaaatgggcctggcttcatcgtggactttactacctcagaactgggcagccgtca
caagcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgg
gagtctctaggggaggcttactttggcagaggtagctatgcaacagctctaaaagccttc
aagaaggccagtgaactgaacccagagcttgtatacagcatttacagagctgcagcagtt
gagcagattctaggcaaacatgaaaatgctatagctacctatcaagaaatcttaaagaag
actgaagagtatgtgcctgcattgaaaggacttggtgagtgctatctcatgctggcgaaa
tcagcccttgataagtatcttgataggaaggctgtggattacatagagcaggctcttgaa
ttttttacaagggcaacaaagcaccgtcctgatatatcttccctttggaaactgcttgga
gatacctgtactagtgtgcatgttatttcaccagccaaagtgaatgttcaagttctagga
ttgcttctgggtaaaaacgaaggcaaacagatgctgaagaaaaatgagctgctcagactg
ggaggaaggtgttacggcagagctttaaaattgatgcctttgcctaacatatggtgtgat
cttggaataaattattatcgacaagcagagcacctcacagcagtggatgctgacatgaat
gagatcagtgaactgctagagaaatctttgcagtgtctcaaaaaagctgtgaggcttgac
agcaaaaatcatctttattggaatgcacttggtgtagttgcttcctgtagtgctattggg
aattatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgtt
gttgcctggaccaacttgggggttttgtatctagtgactggaaacattgagcaagctcat
gaagccttcaaggtagcccagtctctggagccctcttacctactgtgttggattgggcag
gctcttatcgcagaaaaggttggcagctatgatactatggatctcttcaggcatacaact
gaacttagtatgcatactgagggagcaaaaggctatgcccactgggtttgttcaacgctg
caagataaagacaacagaaatactgaggtgtatctgtacaacattgttcaaatgaatgct
attccagcagctcaggtggtcatgaccaaatatacagaaagaaatccagatgatgcatct
gctttcacaatgcttggttacttgagtgagtatatggatctaaaaaggcaggcaaaagat
gcttatgagagggccgcttcattactgaaaaactctgaggatactgagaaatataatata
gctatgcaaaactatggcagatcactgtgtgccattggtgaatgtgataaagccattgag
gtttatacatcaatacctctaactgattttgatggcattgtggggatagcattagcctac
ttcaagaaaggactcttacaagaaagtattaaagcctatgagaaagcgttgtctgttgcc
gagtctgaacaagataaagcacatatcctgactgccttggcaataatagagtataagcag
aacaaagtggatgctgcaaagaccctgctgtttaaatgctcattaaaggaacctagtacg
gaaagtctgaaggttttgtgcacgctaggactggtaaagcaggacgttacacttgcgaca
gcagccttaaaagaattactgaagcacgagaaaggaaaagatgggatttatgagaggtgc
cttattgcatctggtgtttatgcattacaaggtagaaatgtggcagtccagagagaagtc
tcaaaagcaatacatagtaaccctgataatcccgctctttggtctcttttgtctcgacta
gttccactgtatacgttacagaagtcaaaaggtggagccatggcaggaaacattgcacat
gcacttgattcaagctatgggaaggaagtcctactaaatgttgcagttaatcagttggca
gcaggatgtcacatgttaaaagatcagagggaaaatcctctgaaaaatattcagaaggca
atccacctctgtccagataaccctgctgcatgggcagtgctaatggcagcctgtcatgct
gagaacactgttgtctgtctaaacaacactcagccaaagcgaacaggtctagagatgaca
cttgtatctacaatttcagccaaaactagagaaaataaccttccacgtaattatatccag
actcttgaagattggtctctatgtcaagctatcaccagtctagaggagactggtagaatc
tcagaagctgaagcactttgtaccaagggtttaaagagctgtcctgagcacccgggtcta
tttttgcttttgagacaagttcagtgtaggcagctgttgcagactcacaaagagcttcca
gataccatcctggaggagcttcgcaaaacagtcatgaccagttcttcagttgcagcctgg
caatggctggcaaaagtatatcagtcccaaggaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcgtcacagcagggcagctggagtgggaagttatccagtctg
ctcaggctggctatgctagcactggaaatctgcatggctaatgtcccaaatgagcattgg
ccatccttggttcaagaggcaacaactgaagctttgaaactctcaccctgccccttggca
tctctcctgcaagcactactgcagtataaccgcaaaatgggagcaagggagactcgtcga
atgttggaaagagtggtctaccaaccagggaatccagaatccatagtgtcagtggcacgc
tggtacctcctgcagcatctgtatgccaaagatgattatgaattaatagatgtacttgta
gaaaatgccaaagctaatggagatgttagagctctggaactaaacaagaaattgtcatca
agtgcctag
DBGET
integrated database retrieval system
