Anser cygnoides (swan goose): 106044175
Help
Entry
106044175 CDS
T04896
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
acyg00535
]
106044175 (CSPG4)
04091 Lectins [BR:
acyg04091
]
106044175 (CSPG4)
Proteoglycans [BR:
acyg00535
]
Cell surface proteoglycans
Others
106044175 (CSPG4)
Lectins [BR:
acyg04091
]
C-Type lectins
Others
106044175 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
106044175
NCBI-ProteinID:
XP_047937453
LinkDB
All DBs
Position
11:complement(13235746..13255870)
Genome browser
AA seq
2407 aa
AA seq
DB search
MAKLRWGSEGRSDEAAAKAAGPISEQSAAPPSSCRGCAGRVGATAAPDPEVRGLQKGIFV
REPGQESGEAERESSWEGTAATNTGGGSRGASFFGDSYVEMPLADASRTVRLRLQLYTSQ
GSGLLFLAAGQPDHLLLQLRAGTLQARLRLGSEEVTLQSPAELQLDNLAVHDVELLVEDG
RMTLTIDGLFNSSVDIPGPVRELDIQYGLYAGGTSGLNLPYLAGASSPFRGCLHLVTFNG
LDVLSPLSSDGSSKVFHEVQEGCSTQFSAEPEDPFGFLGPQSYVAFPTWDAREEGTIEFV
VTTDVTHAPLIYHAGTEDDFFYLEVSNGRLRGFVNKGNGVVVLHNNVFISDKQQHYVKVY
TGTHKLEILIDYYASSTSNRGINNYLDLRGNLFIGGLNEKALQGLRAHRLAFTSAGTMSN
TSFVGCLEDLRINLQRKSLQDAVLTKNIVAGCGKSDHDYEDYEEAYEQDEAPTSPPPDAW
PAVEGCRPDSSFPPALANISRLLHISPLVLSEGGTAYLEWKHVQPTVDLSLANIRPSQIL
FTLAGDPRHGQLELDVPGSRSRKKFTLLDVVNRKVRYAHDGSEAPMDQLVLEVTVAAQQG
VPECLRQGQKYVLPIMVSPTNDAPQVIFPHGNQMTILTHTRRHLSTDTLQVLDDDTSCDD
LEFQLHGSQRLDEGYVEYDFQPGVPIEEFSCRDLEAGNVVYVHQSGTDLQLTFQVSDGSV
PSPVATLRILAIEPDIRLRNNTGLSISQGGAARISTANLSAETNAVKQRVPILYSLTEPL
RYGEVQKQGSTGGEWKRVESFQQQDLEQGRIQYFSTDPEHRLEDVVEKLRFDVQVGQKVL
PNNTFLISIKRATIKMKTMVPLQMKNKRHKNITSKELEAMLEDPNSAPVPFRYVIIQAPR
KGNLELLGSRLTEGFAFTQEDLQRNHLSYSATVRNSQQAEDAFQFHVRAGEQHSPVYTYP
ISIGGDPDAPDLTNVLLMVPEGGQAVISKDHLFVQSLNSMDYLYEVIEGPAHGRLAWAAS
LGRASGEEITEFTNDDILHRRLLYQHDDSETLEDDIPFVATRQGEGSTEPEAEEVRGVFR
VSIQPVNDHTPVRAVSKVFNVVRNGQHLLTTDDIAFTDKDSGFSDAQLVLARRDILFGSI
VSVDDRSHQLYRFTQDDLRKKKILFVHSGADRGWIQLQVSDGLHQTTALLEVQASEPYIK
IVNNTGLAIPQGSQGSIDASVLSLETNMDIRSDEEIRFLITTPPRWGAVLRGGQPVMAFS
QRDLLAGEVSYRHNGSRNARDELQFTVEANEVAVEDTLAITIFLDTHPSPLHIVNNKEIH
VFQGEAAEIKQEHLLVAHEEIPPQDIVYLVSSPPASGFLVMVQHGRDSDEPPSLDPVQSF
TQEDINSGQVLYLHSKPEEERDHFVVDVTAGGADPLEGVAVSLSVLPATIPLDVGNLTVP
GGGSAVLSTAVLNIPSDYFVARGVEFRVLESPRFGTLLNTKLPEEERLQSFTWSEVENQE
VQYRQDAPRARADSFTLVANASDSGRQSQPRTIFVAIAPRRTAGPRLRINAGLQLRKGAT
ATIGPQTLRAEDEDSPAAEVTFSIQPPVNGKVVLRPAPGVEVRRFTQAQIDSGLVLFVHQ
GPLDGGFAFDLWDGENLSPGHFFLVRAQGEELSLAKKQSLTLCPGALQPLTSENLQAVSS
SPTSPTALYYSIEQAPRLGRLRTARGGEVRNFTQAQVDGGMIFYQHEMPQEPFWLAQDAI
RFRVVTPTSISDSFILLVLISFEANCPQRSTQLWRNAGLRLARAERAEIGTSLLDASNLL
SQVSVPERAAHDVVFLVTGLPLRGQLSVAGVVLGQPQPFFLQSDLAAGRLAYTHGGDAAS
EDRFQFQAWLRPRAQQSLRPPRHGVLISEAFNITVSGGSGKPPRVVKQRRALQVLHGSTV
TLSREYLDVAELEGSPEDVVYTLLQRPLAGHLANAHNPQVAVERFTQADINAGHVVFVTT
TSSSVPESLALSLSDGHHPATLTSLEVVVLPAASPVPLEVPQEVNRATLTPRHLPGEGDA
LYRITRDPRFGQVLVNQKPARGFSQAQLDHGEVTFTFTQLTSPQDSFQFLATSRGVNRSG
EVNVTVRALVTARPGSVWPRGTTALLDTRILDASELANRTRSVPVFRIRRSPHSSRLVRV
SGDPGQPPSPIETFSQRELEQGLVGLEVLDAGDTRQHPQSDSFLFEVAAAGVPPALAALE
YITEPYNASKAYGVTLLVAPPAPSSPVPWPQGTARSGPNASEVGMVPPSAWPGPGATASP
SPVEGGTFLSFIEANMFSIIIPICLILLLLALILPLLFYLHKRNKTGKHHVQGTPSSKAK
NGAVPEQETFRRTDPNQGIPLTTVNSLEGKGAGPPPQGTGPGVPPDPELLQYCRTSNPAL
KNNQYWV
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattacgctggggaagcgagggccggagtgatgaggctgcggccaaggctgct
ggacccatttcagagcaaagcgctgcgccgccttcctcctgccggggctgtgcgggccga
gtgggggccacggctgcgcctgaccccgaagtccgtgggctgcagaaaggcatttttgtg
cgggagccagggcaggagagcggggaggcagagagggagagcagctgggaaggaactgca
gcaacaaacacaggcggaggctctcgtggagcctcttttttcggggacagctacgtggag
atgccgctggcggacgcctcgcgcacggtgcggctgcggctccagctctacaccagccag
ggcagcgggctgctcttcctggctgccgggcagcccgaccacctcctgctgcagctgcga
gccggcaccctgcaggccaggctgcggctgggctcagaggaggtgacgctgcagtcgcca
gcggagctgcagctggacaacctggcggtgcacgacgtggagctgctggtggaggacggc
aggatgacgctgaccatcgacggcctcttcaacagctccgtggacatcccggggcccgtc
cgggagctggacattcagtacggcctctacgctggtggcaccagcggcctcaacctgccc
tacctcgccggggccagctcgcccttcagaggctgcctccacttggtgacattcaacggc
ctggatgtcctctccccgctgtcctccgatggcagctccaaggtcttccacgaggtgcag
gaaggctgcagcacgcagttctctgccgagcccgaggacccctttgggttcctggggcca
cagtcatacgtggcgttccccacgtgggacgcgagggaggaagggaccatcgagtttgtg
gtcaccacagacgtcacccacgcgcccctcatctaccacgcgggcacagaggatgacttc
ttctacctggaggtctccaacgggcgcctgaggggctttgtcaacaagggaaacggcgtc
gtcgtcctgcacaacaacgtcttcatcagcgacaagcagcagcactatgtcaaggtctac
acaggcacccacaagctcgagatcctgatcgactactacgcctcctccacgtccaaccgg
ggcatcaacaactacctggaccttcggggaaacctcttcatcggagggctgaacgaaaag
gccttgcaagggctgagagcgcaccgccttgccttcacctcggcgggcaccatgagcaac
acttcctttgttggctgcttggaggacctgcggataaacctgcagaggaagagcctgcag
gatgccgtgctgacgaagaacatcgtggctggctgtgggaagtcggaccatgactatgag
gactacgaggaggcgtacgagcaggacgaggcgcccacctcccctccgccggatgcctgg
ccagcagtggaagggtgccggccagacagcagcttcccacccgccttggccaacatcagc
aggctgctgcacatcagccccctcgtcctctctgaagggggcacggcctatctggagtgg
aaacacgtccagccgacggtcgacttgagccttgcgaacatccgtccatcccaaattctc
tttaccctcgccggggaccctcggcacggccagctggagctggacgtccccgggtccagg
agcaggaagaagttcaccttgctggacgtcgtgaatcggaaagtccggtatgcccatgat
ggctccgaagcgcccatggaccagctggtgctggaggtgacggtggccgcccagcagggc
gtccccgagtgcctgcggcaggggcagaagtacgtgctgcccatcatggtcagccccacc
aatgacgccccgcaggtgatcttcccccacgggaaccagatgaccatcctgacacacacg
cggaggcacctgagcacggacaccctgcaggtgctggacgacgacacctcctgcgacgac
ctcgagttccagctgcacggcagccagaggctggacgagggctacgtggagtacgacttc
cagcctggcgtgcccatcgaggagttctcctgcagggacctggaagcaggcaacgtagtc
tacgtgcaccagagcgggacagacttgcagctcaccttccaggtgagcgacggctccgtc
ccgagccccgttgccaccctgaggatcctggccatagagcccgacatccgcctgcgcaac
aacaccggcctctccatctcccaagggggggctgcgcgcatttccacagccaacctgtcc
gccgagacgaacgccgtgaaacaacgggtgcccatcctgtacagcctcacggagcccctc
aggtatggcgaggtccagaaacaggggagcacgggaggggagtggaaaagagtcgagtcc
ttccagcagcaagacctggagcaagggcgcatccagtatttcagcacagatccagagcac
cggctggaggatgtcgtggagaagctacgattcgacgtccaggtgggccagaaggtcttg
ccaaacaacacttttctcataagcattaaaagagccaccattaagatgaagaccatggtc
cccctccagatgaagaacaagcggcacaaaaacatcaccagcaaggagctggaggcgatg
ctggaagacccaaactctgccccagtccctttccgctatgtgatcatccaggcccccagg
aagggaaacctggagctgctgggcagcaggctgaccgagggcttcgcattcacccaggag
gacctgcaaagaaaccacctgagctacagcgcgaccgtcaggaactcccagcaagctgag
gacgccttccagttccatgtgcgcgccggtgaacagcactctcccgtgtacacctacccc
atcagcatcgggggggaccccgacgcgccagacctgaccaacgtcctgctgatggtgccg
gaggggggccaggctgtcatctccaaggaccacctgtttgtacagagcctgaacagcatg
gactacctctacgaagtgattgaggggccagcccacgggaggctggcatgggccgcgtcc
cttggcagggcatccggcgaggagatcacggagttcaccaacgatgacatcctgcaccgc
cggctgctgtaccagcacgatgactccgagacgctggaggacgacatccccttcgtagcc
accaggcagggcgagggcagcaccgagcccgaggcggaggaggtgagaggggttttcagg
gtctccatccagcctgtcaacgaccatacccccgtccgggcggtgagcaaggtgttcaac
gtggtgcgcaacgggcagcacctgctgacaacggatgacatcgccttcactgacaaggac
tcgggcttttccgacgcgcagctggtgctggccaggagggacatcttgtttggcagcatc
gtgtccgtcgatgacagaagccaccagctctatcggttcacccaggatgacctgaggaag
aagaagatcctctttgtccactccggggctgaccggggctggatccagctgcaggtctca
gacggcctccaccagaccacggccctcctggaagtgcaggcgtcagagccctacatcaag
atagtcaacaacaccggccttgccatcccccaggggagccaggggagcatcgacgcctcc
gtcctcagcctggagaccaacatggacatcaggtcggacgaggagatacggttcctgatc
accaccccaccgaggtggggggccgtgcttagaggggggcagccggttatggctttctcc
cagagggacctgctggcaggagaggtctcctaccgccacaacgggagcaggaacgcccgg
gatgagctccagttcaccgtggaagcaaacgaggtggcggtggaggacacgctggccatc
accatcttcctggacacccacccaagccccctgcacattgtcaacaacaaggagatacac
gtcttccagggggaggcggccgagatcaagcaggagcacttactggtggcccacgaagag
atccccccccaggacatcgtctacttggtgagcagccccccggcctccggcttcctggtg
atggttcagcacggccgggactcggacgagccgcccagcctcgaccccgtgcagtccttc
acccaggaggacatcaacagcggccaagtcctctacctgcactccaagccagaggaggag
cgggaccacttcgtcgtggatgtcacagcggggggggcagaccccctggagggggtggca
gtgagcctcagcgtgctccctgccaccatccccctggacgtcggcaacctcacggtgccg
ggaggaggctccgccgtcctctccacagccgtcctcaacatccccagcgactacttcgtg
gctcgtggcgtggagttcagggtgctggagtccccccgcttcggcaccctcctgaacacc
aagctgcccgaggaggagaggctgcagagcttcacctggagcgaggtggagaaccaggag
gtccaatacaggcaggacgcgccccgggctcgggccgacagcttcaccctggtggccaac
gcctccgacagcggccggcagagccagccccgcaccatcttcgtggccatcgcgccccgg
cgcacggcggggccccggctgcgcatcaacgccgggctgcagctgcggaagggtgccacg
gccaccatcggcccccaaaccctgcgtgccgaggacgaggacagcccggcggcggaggtc
accttctccatccagcccccagtcaatggcaaggtggtgctgaggccggcgcccggcgtg
gaggtgcggcgcttcacccaggcgcagatcgacagcggcctcgtcctctttgtgcatcaa
gggcccctggatggaggctttgccttcgacctgtgggacggcgagaacctgtcccctggg
cacttcttcctcgtcagggcgcagggcgaggagctcagcctggccaagaagcagagcctc
accctctgcccaggtgctctgcaacccctcacgagcgagaacctgcaggcggtgagcagc
agccccaccagccccacggccctctactacagcatcgagcaagccccgcgccttggccgg
ctgcgcaccgcccgcgggggcgaagtcaggaactttacccaagcccaggtggacggcggg
atgatcttctaccagcacgagatgccacaggagcccttctggctcgcccaggacgccatc
cgcttccgcgtggtgactccgacctccatctccgactccttcatcctgctcgtgctgata
tcattcgaggcaaattgcccccagcgctcgactcagttatggagaaatgcaggcctccgg
ctcgccagggctgagcgggcagagatcggcacctcgctgctggacgcgtccaacctcctg
agccaagtctcagtccccgagagggccgcgcacgatgtcgtcttcctggtgacggggctg
cctctccgcgggcagctctcggtggccggcgtggtgctggggcagccgcagcccttcttc
ctgcagtcggacctggccgccgggcgcctggcctacacccacggcggggacgctgcctct
gaagaccgcttccagttccaggcttggctccggccccgggcgcagcagtccctccgtcct
ccccgccacggggtgctcatctccgaagctttcaacatcacggtgagcggcggcagcggg
aagccaccgcgggtggtgaagcagcgccgagcactgcaggtcctgcacggctccaccgtg
accttgtcccgggagtacctggacgtggccgagctggagggctccccagaggacgtggtc
tacaccctgctccagagacccctcgctggccacctggccaacgcacacaaccctcaggtg
gccgtcgagcgcttcacccaagcagacatcaacgccggccacgtggtgttcgtcaccacc
accagcagcagtgtccccgagtccttagccctgagcctgtccgacggccaccacccggcc
accctgacctcgctggaagtcgtggtgctgcccgcagcgagcccggtgccgctggaggtg
ccccaggaggtgaacagggccaccctgaccccccggcacctcccgggggagggcgatgcc
ctgtacaggatcaccagggacccgaggtttggccaggtgctggtcaaccaaaagccggcg
cggggcttctcgcaggcgcagctggaccacggggaggtgacttttaccttcacccagctc
acctctccccaggacagcttccagttccttgccacatcgcggggagtgaacaggagcggg
gaagtgaacgtcaccgtccgcgccctggtgacggctcggccggggagcgtgtggccacgg
ggcaccacggccctcctggacacccgcatcctcgacgcgagcgagctggccaaccgcacc
aggagcgtgccggtcttcaggatccgcaggtcgccccacagcagccggctcgtgagggtc
tcgggggacccagggcagcccccaagcccgatcgagaccttcagccagagggagctggag
caggggctggtggggctggaggtgctggacgccggggacacccgccagcacccgcagagt
gacagcttcctcttcgaggtggcggctgccggcgtgccaccagcgctggcagccctggag
tacatcaccgagccctacaatgcctcgaaagcctacggtgtcaccctacttgtggccccg
ccagcgccatcatccccggtgccgtggccccagggcacggcgcggagcggccccaacgcc
agcgaggtgggcatggtgccccccagcgcctggccgggccccggggccaccgccagcccc
agccccgtggaggggggcaccttcctcagcttcatcgaggccaacatgttcagcatcatc
atccccatctgcctcatcctcctgctgctggccctcatcctgccgctgctcttctacctg
cacaagcgcaacaagacgggcaagcaccacgtgcagggcaccccgtcctccaaggcgaag
aacggggccgtgccggagcaggagaccttccggaggacggaccccaaccaaggcatcccc
ctaacgactgtcaactccctggagggcaagggcgcgggtcccccgccccagggcacgggt
cctggggtgccaccagaccccgagctcctccagtactgccggacatccaaccccgccttg
aaaaacaaccagtactgggtgtga
DBGET
integrated database retrieval system
