Anser cygnoides (swan goose): 106044286
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Entry
106044286 CDS
T04896
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106044286 (CLSTN1)
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Cadherin related
106044286 (CLSTN1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
EphA2_TM
Glyco_hydro_16
V_ATPase_I
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Neur_chan_memb
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
106044286
NCBI-ProteinID:
XP_047923564
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All DBs
Position
23:4143517..4182529
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AA seq
978 aa
AA seq
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MPPLRPGMPPAPARCLLLAALLCGGAGAARVNKHKPWIETTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCEL
QKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYD
NILKVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPSMRLETCDEPITSIQ
ATVELETSHIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTIGLPTDNGHDSD
QVFEFNGTQAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYAL
YVHNCRLVFLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPAVTLYVDGVSYD
PFPVTEDYPLHPSKIETQLVVGACWQEYTENENDNETVPETSAGGELRMAQFFRGNLAGL
MIRSGKLENKKVIDCLYTCKEGLDLQIADGIGKGVKIHMNPSQSTLTLEGDDIDRVDKAM
QHISYLNSRQFPTPGIRRLKITSAVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINH
FARSASEFESSEGISLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDTCEV
TVVGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHT
VSLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPIEHANHIAAQPRFVHPVHHTFVDL
SGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMD
WDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQ
QNVNRQQQLEWDDSTLSY
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctccgcccgggcatgccgccggcccccgcccgctgcctgctgctggccgcg
ctgctctgcggaggagccggggccgctcgagttaacaagcataagccatggattgaaaca
acgtatcatggtatagttacagaaaatgacaacacagtactcttggacccccccttaata
gctctggataaagatgcacctctgcgttttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcatgggcaaaatgtcccctttgaagcagtggta
gtggataaatccactggcgagggaattatacgctccaaagaaaaactcgactgtgaacta
cagaaggactacacattcaccatacaggcctatgactgtgggaagggaccagatggagcg
aatgcaaaaaaatcccacaaagcaacagtacatattcaggtgaacgatgttaatgagtat
gctcccgtgttcaaagagaagtcatacaaggcaacagttatcgaagggaagaggtatgat
aacatcctcaaagtggaagctgtggatgcagattgttcaccccagttcagccagatttgc
agctatgaaatagtaactccggatgttcctttcgctattgacaaagatggttatataaaa
aacacagaaaagttaaactatggcaaagagcatcagtataaactgacagtaactgcgtat
gactgtgggaagaagagagctgctgaggatgtgttggttaaaattagcattaagcctaca
tgcaagcctggctggcaaggttggagcaaaagaatagaatatgagcctggaactggttct
ttagctctcttcccaagtatgcgtttggagacgtgtgatgagccaataacctcaattcaa
gcaacggttgaactagaaaccagccatattggtaaaggctgtgatagagacacctactct
gagaaatccattcacagactctgtggtgctgcttcgggcacggctgaactacttccccct
ccaagtagtgctgccaactggacgataggacttcctactgacaatggccatgacagcgac
caagtctttgaatttaatggcacgcaggctgtgaagattccagatggtgttgtcaccgtc
aatctaaaagaacccttcatgatttcagtatggatgaggcatgggccgggaaccaaagag
aaggagacaattctgtgcaattcagacaagacagatatgaaccgacaccactacgcactg
tacgtacacaactgccgactggttttcctcttccgccaagatccttcagagggaaaaacg
tacaagcctgctgaatttcattggaaactgaaccaagtgtgtgacaaagaatggcatcat
tatgtcctcaacgttgaatttcctgcggtaactctttatgtagatggtgtttcctatgat
cctttcccggtgactgaagattatccacttcacccttccaaaatagaaactcagctagta
gttggagcatgttggcaagaatatacagaaaatgaaaatgacaatgaaactgtgcccgag
acctctgcaggtggtgaactccgcatggctcagttcttccgaggcaatctggcaggtttg
atgattcgttctggtaaactggaaaacaagaaagtgatagattgcctatatacctgcaaa
gaaggactggatttgcaaatagctgatggtattggcaaaggcgtgaagatccacatgaac
ccaagtcagtcaacgctgaccttagaaggggatgatattgacagggttgataaggccatg
cagcacatttcctatctgaattctcgccaattcccaacacctggaatccggaggcttaaa
atcaccagtgctgtcaaatgtttcaatgaagaggcctgcgtctccattccttctgtggag
ggatatgtgatggtcttgcagccagaggaaccaaaaatcagccttagtggcatcaaccat
tttgcccggtctgcttcagagtttgaaagttcagagggtatttccctctttcctgagctt
cgcataataagcaccattacacgggaggtggagcccgagggagatggagatgaagatcct
acagttcaagagtctttggtatctgaagagatcatgcataacctggatacgtgtgaggtg
actgtggtgggagaggaactaaatcaggaacaagaaagcctggagattgacatgacacgg
ttacagcagaagggcattgagatgagtagttctaaccttggcatgatcatcacaggggtg
gatactatggctagttatgaggaagttttgcatttgatacgctacagaaactggcacact
gtttctctctttgacagaaagttcaaattagtttgttctgagcttaacgggcgctatgtc
agcaatgaatttaaagtggaggtgaatgttatccacactgctaaccccattgaacatgct
aatcacatagctgcgcaaccacggtttgttcatccagtgcatcatacgtttgttgacctc
tctggtcacaacctagctaaccctcatccattttcagttgttccaagcacagccactgtt
gtgattgtagtttgtgtgagtttcctggtttttatgattattctgggagtgttccgaatc
cgagctgcacatcagagaacgatgcgtgaccaggacactggaaaggaaaatgagatggac
tgggatgactctgctttgaccatcactgtgaaccctatggagacttacgaggatcaacac
agcagtgaagaagaggaggaggaagaggaggaagaaagtgaagatggagaagaagatgac
atcactagtgcagagtctgaaagtagtgaggaagaggaaggagagcaggaggaggaccaa
cagaatgttaatagacagcaacagctggaatgggatgactctaccctcagttattga
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