Anser cygnoides (swan goose): 106044442
Help
Entry
106044442 CDS
T04896
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04382
Cornified envelope formation
acyg04510
Focal adhesion
acyg04512
ECM-receptor interaction
acyg04518
Integrin signaling
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106044442 (COL4A1)
04518 Integrin signaling
106044442 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106044442 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106044442 (COL4A1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106044442 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acyg04147
]
106044442 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
acyg00536
]
106044442 (COL4A1)
Exosome [BR:
acyg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106044442 (COL4A1)
Glycosaminoglycan binding proteins [BR:
acyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106044442 (COL4A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106044442
NCBI-ProteinID:
XP_066841598
LinkDB
All DBs
Position
1
Genome browser
AA seq
1845 aa
AA seq
DB search
MSIFAPSQPGGSAHGFLPPPGRPLRAEPSPLPTPGTLRSSARRCRGGGVARSRPARDAPG
PCPAPRPLRSSPRPPGRCGARKRRLSPRRPPAPTRGGRRRRRRRRRRRRNRGERARLRAP
RVSARGEERGLPPPIGYGEASPSHCRRRGRHGGERHGFGAGPAEPPRRAAGTVRGSMRLW
LGFGLLLSAELGAVAAAGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEGPPGP
PGLKGDTGEPGLPGTKGTRGPPGPSGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGP
VGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGPPGTPGFQG
PMGPPGLPGEPGPPGPPGPPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPAPHVKEKGS
EIIKGEKGEQGAKGEQGTPGLPGSAFRGEKGEPGDPGPRGKPGKDGEPGPKGQPGLPGGF
GIPGRPGEPGAKGEKGDQGPQGPPGRVIDTGPMDAFGEKGDPGVSGLPGQKGQKGEKGFP
GLQGIPGIPGRPVPDRVGSPGVPGERGEKGEKGSPGFPLPGPPGRDGFPGPPGLPGPPGP
PGVTDGIDQCQQGQPGAPGIPGPPGQHGFPGEMGEKGEKGETCTLCDKVGPPGLPGPQGP
PGPAGFPGQSGFKGDRGLPGLDGLPGVPGPPGAPGLIGHPGAKGEPGDFSYDSILKGEKG
DPGFPGQPGIPGREGTPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGERGFPG
PPGIGTAGLPGDKGDRGFAGTPGLPGLPGTKGEAGRTIPLPGPPGADGLPGPPGFPGPQG
DKGNPGLPGIPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDGLPGT
PGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGNPGLPGLRGEQGFPGIPGQQGFRGDP
GLPGLQGLPGPPGAPGLGPQGSPGPAGQPGPQGPPGFPGIKGERGFPGIPGLDMPGPKGD
KGSQGQPGVPGSVGLPGLPGPQGSVGLKGSEGAKGEMGVMGTPGLPGTPGPVGDRGLPGE
KGSPGFKGVVGPQGDPGVKGDKGEAGLPGVPGSMDTMDMVSLKGQKGDPGEKGDHGPTGE
KGLRGEYGEPGIPGKDGEPGTPGHPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGTPGE
KGLPGVPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRTGSPGLSGDKGEK
GNIGMPGIPGAPGPKGSPGMAGFPGSPGRHGEKGEKGLPGLSGIPGLKGEPGEPGVPGPA
GSIGQKGEPGYDGIPGAAGAKGEQGIPGRGLPGFPGAKGDKGAKGDVGFPGSPGSPGIPG
LKGEPGYAGPPGPKGNQGLPGLPGIAMEGPKGDRGPQGQPGLPGLPGPIGPPGPPGLKGA
KGEQGSEGWPGTPGGPGVKGDPGFQGLPGSPGLPGDIGQKGDLGPPGVPGVPGPKGSPGF
PGLKGERGDQGLPGSKGLQGPPGPPGAFQLVKGEPGLPGPVGPVGLKGFPGLPGPKGQQG
VTGPSGVPGPPGSPGFDGKPGQKGEVGPYGPPGPRGFPGPPGPEGLPGAMGPPGAASVAH
GFLVTRHSQTIEEPLCPSGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLF
CNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIRPFISRCAVCEAPAMVIAVHSQT
IQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNY
YANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRKT
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcttcgctccttcccagcccgggggctccgctcacggcttcctcccgccgccg
ggccgtcccctgcgagccgagccgagcccgctcccgacgccgggcaccctccggagctcg
gcgaggcgctgccggggggggggggtggctcgcagccgccctgcccgggacgcccccggc
ccctgccccgctccgcgcccgctccgctcctctccgcgccctcccgggcggtgtggggcg
aggaagcggcgcctctccccccgccgcccgcccgcacccacccgtggcgggcggaggagg
aggaggaggaggaggaggaggaggaggaaccgcggggagcgggcgaggttgcgcgctccc
agggtctccgcccggggggaggagagggggctgccgccgcccatcggttacggcgaggcg
agtccctcgcattgcaggcgccgcggccgccacggaggggagaggcacggctttggggcc
ggccccgcggagcccccacgccgagccgccggcacggtgcgcggcagcatgcggctctgg
ctgggcttcgggctgctgctcagcgccgagctcggcgccgtggccgccgcgggttgttcc
ggttgtggaaaatgtgactgcagtggagtaaaagggcaaaagggagaaagaggcttgcca
ggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggtcctcctgggcca
ccagggcttaagggtgatactggagaaccaggactgccaggaacaaaaggaacaagaggc
ccaccaggaccatcaggatttccaggaaacccaggccttcctggcattcctggacaagac
ggccctcctggtccacctggcattccaggatgtaatggcacaaagggtgaaagaggtcca
gtaggtcccccaggtttaccaggactgactgggagcataggacccccaggacctcctgga
atgaagggagatccaggtgaagtgattggtcttttacctcctagtgtgctaaaaggtgat
aaaggctttcctggccaacctggattacctggtccacctggaactccagggtttcaggga
ccaatggggccaccagggcttccaggagaaccaggtcccccagggccaccaggacctccg
ggcgagaagggctacatgggtttgggctttcagggtccaaaaggtgaaaagggagaacaa
ggagtccgtggtcccccagggccaccaggacctgcaccacacgtgaaagaaaaaggaagc
gaaatcataaagggagaaaagggtgaacaaggtgcaaagggagaacagggaaccccagga
ttgccaggctcagctttcagaggagaaaagggtgaacctggggatcctggtccacgtgga
aagcctggaaaagatggcgagccaggaccaaaaggacaacctggtttgcctggagggttt
gggattccgggacggcctggggaacctggtgctaagggtgaaaaaggtgatcaaggtcct
caaggtcccccaggaagagttatagatactggaccaatggacgcctttggtgaaaaggga
gaccccggagtttcaggtttgccgggacaaaaaggtcaaaaaggtgaaaaaggttttcct
ggtttacaaggaatcccaggaattccaggtcgaccagttccagacagagtaggatcacct
ggtgtccctggagagagaggtgaaaaaggtgaaaagggttctcctggattccctttacct
ggaccccccggaagagatggtttcccaggtccccctgggctccctggccctccaggtcct
ccaggcgtaacagatggaattgatcaatgccagcaggggcaacctggtgcaccaggtata
cctggacctccagggcaacatggatttccaggagagatgggagagaaaggtgaaaaagga
gaaacctgtactttatgtgataaagtaggacctcctggacttccaggaccacaaggacca
ccaggtccagcaggttttccaggacaatcaggtttcaagggtgacagaggcttacctgga
cttgatggccttccaggggtacctgggcccccaggtgctccaggacttatcggccaccct
ggggcaaaaggagaaccaggagatttttcttatgattctatcctgaaaggtgaaaaggga
gatcctggtttcccaggacaaccaggtattcctggaagagaaggaacaccaggaaaagat
ggattgccaggtccacagggtccaaaaggagcatcgggtacagctggcttgaaaggagaa
cgtggtccccctggccaacctggattccctggagtacgtggtgaaagaggttttcctggc
cctcctgggataggcactgcagggttacctggtgacaaaggagacagaggctttgctgga
accccaggtttaccaggccttccagggacaaagggtgaagcaggacgaactataccgctc
cctggacctcctggggcagatggccttcctgggccacctggtttccctggaccccaaggt
gacaaagggaatcctgggcttccagggatacctggcctgccaggagaaaaaggtgctgtt
ggacagccaggtatagggttccctggacctccgggacccaaaggttttcaaggtcagcct
ggctcacctggtctaccagggactccaggaacccctggcctggatggtttgccaggtaca
ccaggtttacaaggtcaaaaaggtgaacctggtgtgggtctccctggccctaaaggatta
ccaggccccccaggcccagctggcatccctggagaaaagggaaatccaggactgcctggt
ttacgtggtgagcaaggattcccgggcatacctggacagcaaggattcagaggtgacccc
ggcctcccgggactgcaaggcttgccaggccccccaggtgcaccagggctgggcccacag
ggatcgccagggcctgctggacagccaggaccccagggaccaccaggatttcctggaata
aaaggagaaaggggcttccctggtatcccgggtctagatatgccaggaccaaaaggcgat
aaaggtagccagggccagcctggagtaccagggtctgtggggttacctggcctgccgggt
ccacaagggtctgttggactgaaaggatcagaaggagccaaaggagaaatgggagttatg
ggaactccgggactgccagggactcctggaccagttggagatcgagggttgcctggtgaa
aaaggtagcccaggtttcaaaggggtagttggaccacagggtgatccaggcgtcaaaggg
gataaaggtgaagctggtctcccaggagtacctggaagcatggataccatggacatggtt
agtctcaaaggccaaaagggagatccaggagaaaaaggggaccatggaccaacaggagaa
aaagggttacgtggagagtatggagaaccgggaattccaggaaaggatggtgaacctggt
actccaggacatccaggaccaaaaggtgatcagggccccccagggtacccaggagatcca
ggaattccaggacaaaaaggatcagttggtgaaatgggtttgccaggaacacctggagaa
aagggtctgcctggagtaccaggttcaccaggcacaccagggttccctgggcaaaaaggt
gaaaaaggagacaaaggagcagcaggttttcctggaattggctttccagggtctcctggt
gagaagggagaacctggaagaacgggtagtccaggtttatctggagacaagggtgaaaag
ggtaatataggaatgccaggaataccaggtgccccaggtcccaaaggatctcctggcatg
gcaggatttccagggagccctggccgccatggagaaaagggtgaaaaaggacttcctggc
ttaagtggcatcccaggtttaaaaggagaaccaggtgaacctggtgttccgggtcctgct
ggttccattggtcagaagggtgaaccaggttatgatgggattccaggtgctgctggtgca
aagggtgaacaaggtattccaggtagaggacttccaggatttccaggtgcaaagggagac
aaaggtgcgaaaggcgatgtgggtttcccaggatccccaggaagtccggggatcccaggc
ctaaaaggagaaccaggatatgccggtccaccaggccctaaaggcaaccaaggtcttcct
ggactaccaggaattgcaatggagggccctaaaggagacagaggaccccaaggccaacct
ggccttccaggtttaccaggcccaatagggccaccagggccaccaggtctgaaaggggcc
aaaggagagcagggcagcgaaggctggcctgggactcctggaggtccaggagtcaaaggt
gatccgggtttccagggtctgccgggtagtccaggtttaccaggagatatcggtcaaaag
ggtgatctaggacctccaggagttccaggagttccaggtccaaaaggatctccaggcttc
ccaggccttaagggtgagcgaggtgaccaaggtcttcctggatctaaaggtttacaaggc
ccaccgggcccgccaggtgcttttcagcttgtcaaaggagagcctggcttacctggccct
gtaggaccagttggtctcaaagggttcccaggacttccaggtcccaaaggacagcaagga
gtgacaggaccttcaggtgtacctggaccacctggcagtccagggtttgatggcaaacct
gggcaaaaaggagaagttggtccttatggtcccccagggcccagaggattccctggtcca
cctggtcctgaaggtttgcctggggctatgggcccaccaggtgcagcatctgttgctcat
ggcttccttgttaccagacatagtcaaaccattgaagaaccattatgtccttcgggaacg
aggctcatttatcatggctactccttgctttatgtacaaggcaatgaaagagcacatggc
caagatctgggcacggcagggagctgtcttcgtaaatttagtactatgcctttcttattc
tgcaatatcaacaatgtatgtaactttgcatcaaggaatgactattcctactggctgtca
acgcctgaacccatgccaatgagtatggctcctatcactggggaaagtatcagaccattc
atcagcagatgtgccgtgtgtgaagcccctgctatggtaatagctgttcacagtcaaaca
attcaaataccaccatgtcctgaaggctggagttcactttggattggttactcctttgtc
atgcacaccagtgctggtgctgagggttctggccaggccctggcatctcctggttcctgc
ctagaggagttccgcagcgctcccttcattgaatgccatggccggggcacctgcaattat
tatgcaaatgcttacagcttctggcttgccactatagagaggaatgagatgttcaagaaa
ccgactccgtcaactttgaaagcaggggatctgcgctcaaacgttagccgttgtcaagtc
tgtatgagaaaaacataa
DBGET
integrated database retrieval system
