Anser cygnoides (swan goose): 106044448
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Entry
106044448 CDS
T04896
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04382
Cornified envelope formation
acyg04510
Focal adhesion
acyg04512
ECM-receptor interaction
acyg04518
Integrin signaling
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106044448 (COL4A2)
04518 Integrin signaling
106044448 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106044448 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106044448 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106044448 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acyg04147
]
106044448 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
acyg00536
]
106044448 (COL4A2)
Exosome [BR:
acyg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106044448 (COL4A2)
Glycosaminoglycan binding proteins [BR:
acyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106044448 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106044448
NCBI-ProteinID:
XP_047936755
LinkDB
All DBs
Position
1:149511376..149651061
Genome browser
AA seq
1714 aa
AA seq
DB search
MDISQLPSARGLVCQDLGVVLVLLEVVLSAVRVDAGGKTYTGPCGGRDCSGGCQCFPEKG
GRGQPGLLGSQGFPGPPGLMGIPGVQGPKGHKGERGHPGISGPKGEMGLRGVTGFPGADG
VPGHPGQPGSRGKPGHDGCNGTVGDPGDSGTPGLSGFPGTIGVQGPKGQKGEPYILPPDI
ASRYRGEPGDPGFSGFPGPPGILGVQGPIGPRGERGRPGPPGPPGPQGPQGNRGLGFYGE
KGEQGPPGPPGPPGLPTRELMGVPSDKHKGERGERGPKGEPGQPGIRYAGERGEKGVMGF
SGQRGLPGIDGSPGLSGERGFSGPDGLPGGYGPRGAKGEQGEMGPPGPPVYVPYHIPRKG
TRGEPGFPGASGLHGEPGEQGDRGLPGPPGFSDGDADKPGLPGEMGPKGEKGELGSPAYQ
AGPPGFPGKHGEPGLRGPPGPAGIPGSLFGLKGQEGTPGRPGTQGYPGPRGQKGPKGEEG
DCSKCLLGDELRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGPHGIPGYPGAKGLSGQEGF
PGPKGEKGDSFYITTKGTKGIRGDPGLPGIRGGDGFPGRDGLDGLPGQPGLPGDTIRGFP
GDPGYPGELGPKGFPGETGLPGEGFVGPKGYRGPPGDHGTDGSPGPPGLPGPPGEPGQLD
CGQVIEDFSRGDGTEPIWSGGGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPVGYPGL
NGTRGDPGREGLPGPPGFIGPRGDRGPNGLPGLQGHPGLTGKSGAPGLAGQKGVPGEVLR
ATAGSRGDAGLPGFPGLKGTPGDQGVPGVRGADGSPGLPGAKGDPGLQGLPGLMGLPGSP
GTHGFPGPPGNPGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGETGYPGLQ
GIPGVIGPPGISGMDGFPGDKGLRGSPGIDGFKGMPGLKGRPGIKGIKGEFGSFGARGDK
GAQGARGFKGDRGEQGPPGEPPKLKPSMMMEVKGEKGDVGETGTKGFFGLKGSKGMPGLP
GKTGTPGSPGHPSYVAGVKGDIGAKGLTGLKGYPGPAGSPGIRGFPGSTGGRGDKGVPGI
SGHFGTPGSHGEIGEPGDTINLPGMPGLKGEVGVPGLTGLRGGPGQKGEGGEPGNPGIEG
IRGTQGVPGSLGQEGLPGLVGPPGQQGSPGTPGSQGEKGTPGWPGLPGQAGLPGLRGISG
LHGLPGTKGLPGSPGPDGYGSAGFPGTVGDKGEAGEQSRVEGSRGPPGQKGDRGVPGIQG
PFGIPGQDGFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGQAG
VSGQTGPKGDRGDPGLAGRPGIPGYPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPKGDRG
LTGFQGPPGSPGLPPLPPRLFAEQGSPGPRGNTGPQGSPGDMGPQGPPGDPGFRGSPGDP
GLQGRGGIPAPPGSRGEQGAMGFQGPVGFEGQPGRPGSPGLPGMPGRSVSIGYLLVKHSQ
SDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYY
ANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQEASIPRCPEGWR
SLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLT
TIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcagcttcccagcgcgcgtggtttggtttgtcaggatctgggggtcgtg
ctggtcctgctggaggtggtgctgtcagccgtcagagtagatgctggtggaaagacttac
acaggaccatgtggaggaagagactgcagtggaggatgccagtgttttcctgaaaaagga
ggccgtggccagccaggactccttggatcacaggggttccctggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggacatccaggaata
agtggacccaaaggagaaatggggctaagaggagtcactggattcccaggggcagatggc
gttcctggtcatccagggcagccaggatcaagggggaaaccgggtcatgatggctgtaac
gggacagtaggtgaccctggcgactcaggaactccaggactctctggtttccccggtacc
attggagtccaagggccgaagggccagaagggggagccctacatactaccgccagacatt
gccagccgttaccggggagaacctggggatccaggattcagtggttttccaggacctcca
ggtatattgggtgttcaaggacctattggtccaagaggagagcgaggaagaccaggacca
ccagggcccccaggaccacaaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggcgaacagggacccccaggtccaccaggtccacccgggcttcctacaagagaactg
atgggtgtcccctctgacaaacacaagggtgaaagaggagaacgtggaccaaaaggggaa
cctggacaaccaggtatacggtacgctggtgaaagaggtgaaaaaggggtaatgggcttc
tcaggacaaaggggactgcctggtatcgatggctctccgggactcagtggagaaagaggt
ttttcaggacctgatggcctaccaggtggatacggtcctagaggagccaagggagagcag
ggcgagatgggtcctcctggaccccctgtctatgttccataccacattccaagaaaaggt
acaagaggtgaaccaggctttccgggtgcttctggactacacggagaaccaggagagcag
ggagatcgtgggctgcctggtcctcctggattctctgatggagatgcggataagccaggt
ttacctggagaaatgggaccaaaaggtgaaaaaggtgaattaggatctcctgcttatcag
gcaggcccgcccgggtttccgggtaagcacggtgaaccagggctccgtggtcctcctggt
cctgctggaattcccggttctctctttggattaaaaggacaggaagggacaccaggtaga
cctggcacacaaggttaccctgggccaagaggacaaaaaggacccaaaggcgaagaaggg
gattgcagtaaatgccttctgggtgatgaactccgaaggggctccactggcccccctggc
ccgcctggttttccaggaacccctggccagccagggagaaaaggagaacctggtgatcaa
ggtccacatggtattcctggctaccctggagcaaaaggattgtcgggtcaagaaggattt
ccaggaccaaaaggagaaaagggagattctttttacataactactaaaggcaccaaagga
atccgaggagatcctgggcttcctggtatcagagggggagatggttttccaggcagagat
ggattagatggtttaccaggacagcctggccttccaggtgatactatcaggggcttcccc
ggcgatcctggttatccaggtgaattaggcccaaagggctttccaggggaaacgggtctg
ccaggtgaaggatttgttggtccaaaagggtaccgtggtcctccaggtgaccatggaaca
gatggaagccctggacctccaggtctgcccggtccaccaggagagcctggccaactagac
tgtgggcaggtcattgaagacttttctagaggagatggaactgaaccaatatggtcaggt
gggggctgcgtgaggccaccaaaggggtcccagggcaagccaggactgccaggagccaca
ggtgctaaaggtgcaagaggattcccaggtgatccaggcccagtgggatacccagggctc
aatggtacacgaggtgatccaggtcgggaaggattgccaggtcctccaggttttattggg
cctcggggagacaggggcccaaatggactacctggactacagggacacccaggccttaca
ggaaagtctggtgctccaggactggcaggacagaagggcgttcctggtgaagttttgaga
gcaacagcaggttctcgaggggatgctgggctgcccggcttccctggcttgaaaggcaca
cctggagatcaaggagtaccaggagttagaggagcggatggtagcccaggcttgccagga
gccaaaggtgatccagggctgcaaggtctccctggtctgatgggtttgccaggatcacca
ggaacacatggattcccaggcccaccagggaaccccgggcctgacggcggacctgggtct
caaggaccccttggtccaccaggtgcaagaggagaagatggtgagcaaggttttcctggt
cccgtgggcctgaaaggtctgtctggtgacaaaggtgaaacggggtacccaggattgcaa
ggtatacctggcgtgattggtccccctggcatcagtggaatggatggctttccaggagat
aaaggcttaagaggttcacctggcattgatggtttcaaaggcatgcccggcctgaaagga
agacctggaatcaaaggaatcaaaggagaatttggttcattcggggctcggggcgataaa
ggcgcacagggcgcacgaggctttaaaggtgaccgtggggaacagggtcccccaggagag
cccccaaagctgaagcctagcatgatgatggaagttaaaggtgaaaaaggagatgttgga
gaaaccggcaccaagggattcttcggcttgaaaggtagcaagggaatgccaggcctcccc
ggtaagacaggaactcccgggtctccggggcaccccagttacgtggcgggtgtgaagggg
gacattggtgcaaaaggactgacaggtctgaaagggtatcctggtccagctggctctccc
ggcatcagaggcttccctggcagcacaggaggcaggggagataagggtgtcccaggaatt
tcaggccattttggtactcctggctcccatggtgaaataggtgagccgggagatactata
aacttaccaggaatgccaggtcttaaaggggaagtcggtgtgccaggcctaacaggctta
agaggaggcccaggacaaaaaggcgaagggggtgagcctggtaaccctggcattgagggc
atcaggggcacacagggtgtccctggctccttgggacaagaaggattgccgggactggtt
ggccccccagggcagcaaggaagccccgggacacctggatctcaaggtgaaaagggaact
cccggctggcctggcttacccggacaagcaggcttgcctggcttgaggggaatcagtgga
ctgcacggcttaccaggcacaaagggactgccaggatcaccaggtccagatggctatggc
tctgcaggcttcccaggtaccgtgggtgacaaaggagaagcaggagagcagagcagagta
gaaggcagccgaggccctccgggtcaaaagggagacagaggtgttccagggatccaagga
ccctttggcattcctgggcaggatggatttccagggcctcccgggatttcaaatatatca
ggatatcctggtgataaaggttccccaggtctggacggagtgccaggctatccaggacta
caggggcagcctggaataccggctccacctggaagcaaaggagaaagcggacaagcaggt
gtgagcggacaaactggcccaaaaggagatagaggtgatcctggattagcagggagacct
gggattcccgggtatcccgggccaaaaggtcgcaagggtgagcaaggtgtcatcggcttt
atgggcacagtaggatttccaggtgatctgggacccatcggacccaagggggacagagga
ctaactggctttcagggccctccaggctctcctgggctgccgcctcttcctccaaggctg
tttgctgagcaaggttcaccaggtccccgtggaaatacaggacctcagggaagcccagga
gatatgggccctcagggtccaccaggcgatccaggtttcagaggctcacctggagaccca
gggctccagggcagaggtggcattccagctcctcctggatccagaggtgaacaaggagca
atggggtttcaaggcccagtgggatttgaaggccagccaggccgccctggtagccctggg
ctgccaggcatgccgggtcgcagcgtcagcatcggctacctgctggtgaagcacagccag
tccgaccaagagccgatgtgtccgatcggcatgaacaaactctggagtgggtacagcctc
ctgtacttcgaagggcaagagaaagcacacaaccaggacctagggctggccggctcatgc
ttggctcgtttcagtacaatgccattcctctactgtaacccgggggatatttgttattat
gcaaatcgaaatgataaatcctactggctctcgactacagcacctctcccaatgatgcct
gtggcagaagaagaaattagaccatatatcagccgctgctcagtctgtgaggccccagct
gtggcgattgctgtccatagccaagaagcttctattcctcgctgccctgaaggctggcgc
agtttgtggattggatattccttcctcatgcacactgcggctggtgatgaaggtggagga
cagtcgctggtttctcctgggagctgcctggaagatttcagagctactcctttcatcgaa
tgcaacggcgcacgcggaacctgtcattactttgcaaataaatacagcttctggctcact
acgattgaccagcccttccaaagcaagccctcagcagatacactcaaggcaggactcatc
cgaagccatatcagcaggtgccaagtctgtatgaaaaatttatag
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integrated database retrieval system