KEGG   Anser cygnoides (swan goose): 106044969
Entry
106044969         CDS       T04896                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
acyg  Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acyg03036]
    106044969 (KDM4B)
Enzymes [BR:acyg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     106044969 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     106044969 (KDM4B)
Chromosome and associated proteins [BR:acyg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106044969 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 DUF4537
Other DBs
NCBI-GeneID: 106044969
NCBI-ProteinID: XP_013050678
LinkDB
Position
27:complement(2995176..3086285)
AA seq 1130 aa
MYKAQSTSRLKRCCRRTGNMGSENPSPQNPGCKIMTFRPTLEEFRDFGKYIAYIESQGAH
RAGLAKVIPPKEWKPRKTYDDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRL
ANSEKYCTPRHQDFEDLERKYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMV
EHECGIIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLE
RLAKGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFN
HGFNCAESTNFATLRWIDYGKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDIAV
LDHMKPTALTSPELDAWNETKAELKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKS
LGDVMAIETALEDVKVKEELKRGPDLEEEERSKAIEGEGDCKVKARPPKVKGERKKKHLF
HQHQHHLQAPQPQQQQPPLPPAPQQQLAGEEAPAARPPVPTAVPTSSAAEKSLPPAPLNI
IQPSETPVEEDDFKPRPIIPMLYVVPRTKKVVFDKERMSCQQAFEQFATQKSPGWREQTV
PLEIPVKEEENAEAGNTEIATEVSDLQTAAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQ
ETSSDEEMFPFSGEEDMSDPEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTL
FYPYNQSLQVDKEAAPVSAGETTSFVHLSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYI
GEDGTSPLISCAKCCLQVHASCYGIRPDLVDESWSCSRCSANAWAAECCLCNLRGGALQM
TTDGRWIHIICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVPGACIQC
SYEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANQNIQFRREVTLGQTVITKN
RNGLYYRCKVIGTTTQTFYEVNFDDGSYSDNVYPESIISRDCIRMGPPPEGEMVQLQWTD
GIVYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDV
FSGDEVRAAKRPRLGNSRNPEEYGQNQDYLAFMESLLQTQYQPGTQSNMF
NT seq 3393 nt   +upstreamnt  +downstreamnt
atgtacaaagctcagagcacttcgaggttaaaaaggtgctgccgccgtacaggaaatatg
gggtctgaaaacccaagtccgcagaaccctggctgtaagatcatgacctttcgtcccacc
ctcgaggagtttcgggacttcgggaagtacattgcttacattgaatcccaaggagctcac
cgagcagggcttgccaaggtgatccctcccaaggaatggaagccacgaaaaacctatgac
gacattgatgatatggttatcccagctcccattcagcaggtggttactggccagtcgggg
ttattcacccagtataacatacagaagaaacctatgactgtgggagagtaccggcgcctg
gctaacagtgagaagtattgtactccacgccatcaagattttgaagacttggagcgcaag
tactggaagaatctcacgtttgtctcaccaatttatggggctgatatcagcggctcacta
tacgacgcagatgtggaagaatggaatattggcaatctgaacaccctcttagacatggtg
gaacacgagtgtggtattattatagaaggtgtgaacactccgtacctctacttcgggatg
tggaagacaacatttgcttggcatacagaggacatggatctctacagtatcaactacttg
cattttggggagccaaaatcctggtatgccattcctccagaacatggcaaaaggttggaa
cgcctggcgaaaggtttttttcctggaagctctcagggatgcgatgctttcctccgtcac
aagatgaccctcatttcgccctcaatcttgaagaagtacggcattccttttgaccggatc
acccaggaagctggagaattcatgattacatttccttacggttaccatgctggcttcaat
cacggcttcaactgtgccgagtctaccaactttgccactttgcggtggatcgactacgga
aaaatggcaacccaatgtacttgccgcaaagacatggtgaagatttccatggatgtcttt
gtgagggttctgcaaccagaacgttatgatttatggaaacaaggaaaagatattgctgtc
ctggaccatatgaaacccacggctctgactagcccagaactagatgcctggaatgagacg
aaggcagaactgaaggccaaattgcttcgcaggataggagatgaggaagaggacaacaaa
caccggtctcacagaaaaagaagtcagcccagaagacataaaacagaggatcagaagtct
cttggggatgtcatggctattgaaactgccttggaagatgtgaaagtaaaagaggaactg
aaaagggggccagatctagaggaagaagagagaagcaaagcgattgagggagaaggtgac
tgcaaagtaaaggcccgtcctccgaaagtaaaaggtgagaggaagaagaagcaccttttc
catcaacaccagcaccatctgcaagcaccgcagcctcagcagcagcagccacccctgccg
ccggcaccgcagcagcagctggcaggggaagaggcaccagcagcacggccaccagtaccc
acagcagtacccacgtcgtccgcagcagaaaagagcttgcccccggctcccctgaacatt
atccagccctcggagacgccggtagaggaagatgactttaagcctcggcctatcattccc
atgctttatgtggttccacggaccaaaaaggtggtgtttgacaaggagcgcatgtcctgc
cagcaggcgttcgagcagtttgcgacacaaaaaagtccaggttggcgggaacagacggtc
cctttggaaatccctgtgaaggaggaggagaatgcagaagcaggaaatacagagattgct
acagaggtcagtgatttacagaccgctgctttttcaaaaatgaagatggagataaagaaa
agtcgtcgtcatccactgggcaaaccacccacccgctccccattgtcagttgttaaacag
gagacctcgagtgacgaggaaatgtttccattttctggggaggaagatatgagcgaccca
gaggctttgaaatctttactctcccttcagtggaagaataaagcacataatttcccagct
gaaagaaaattcaatgcagctgctgcactgagtgagccatactgtgctgtctgtaccctc
ttctacccatataaccagtctttacaggtggataaagaagctgccccagtctctgcaggg
gagaccacctccttcgtccacctttctaagtgcggacagaagaccaagcctctgatccca
gagatgtgctttacctcaagtggagaaaacacagagccccttccttcaaattcatatatt
ggagaagatggaaccagtcccttgatatcctgtgccaaatgctgcctgcaggttcatgct
agctgttatggaatacgtccagatttggtggatgaaagctggtcttgctcacggtgctca
gccaacgcatgggcagcggaatgctgcctgtgtaatctcaggggaggagctcttcagatg
accactgatgggcggtggatccatataatctgtgctattgctgtccctgaggcccgtttt
ctcaatgtaatagagcgtcatcctgtggatatcagtgctattccagagcagagatggaaa
ctgaaatgcgtgtactgtcggaagcggatgaagaaagtgcctggtgcctgcatccagtgc
tcctatgagcactgctccacttccttccacgtgacctgtgcgcacgccgctggtgtaccc
atggagccggatgactggccctacgttgtgtccatcacttgcttcaaacacaaagcagct
aaccagaatattcagtttcgaagggaagtgacccttggacagactgtgatcacaaagaac
cggaatggactctactacagatgtaaagtgattggcacgacaacacagactttctatgaa
gtaaactttgatgatggttcatacagtgacaacgtttacccagaaagcattattagcaga
gactgcatccgaatgggaccccctccagagggtgagatggttcaactgcagtggacagat
ggaatcgtctataaggccaagtttattgcagcccagatcagtcagatttatcaggttgag
tttgaagatggttcccagctaatggtaaagcgtggtgatatttataccttggaggaagag
cttccaaagagagtgaagtctcgcctgtccctcagcactggggcccctcaggaagatgta
ttttcgggagatgaagtgagagcagctaagcgcccccggctggggaattcaagaaatcct
gaagaatatggacaaaaccaagattacttggcctttatggagagcctgttgcagacacag
taccaacctggaactcagagcaacatgttttaa

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