Anser cygnoides (swan goose): 106045319
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Entry
106045319 CDS
T04896
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04010
MAPK signaling pathway
acyg04210
Apoptosis
acyg04218
Cellular senescence
acyg04620
Toll-like receptor signaling pathway
acyg04621
NOD-like receptor signaling pathway
acyg04622
RIG-I-like receptor signaling pathway
acyg04623
Cytosolic DNA-sensing pathway
acyg04625
C-type lectin receptor signaling pathway
acyg04920
Adipocytokine signaling pathway
acyg05132
Salmonella infection
acyg05164
Influenza A
acyg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106045319 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106045319 (NFKB1)
04218 Cellular senescence
106045319 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106045319 (NFKB1)
04621 NOD-like receptor signaling pathway
106045319 (NFKB1)
04622 RIG-I-like receptor signaling pathway
106045319 (NFKB1)
04623 Cytosolic DNA-sensing pathway
106045319 (NFKB1)
04625 C-type lectin receptor signaling pathway
106045319 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
106045319 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
106045319 (NFKB1)
05168 Herpes simplex virus 1 infection
106045319 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
106045319 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyg03000
]
106045319 (NFKB1)
Transcription factors [BR:
acyg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
106045319 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
106045319
NCBI-ProteinID:
XP_047922347
LinkDB
All DBs
Position
4:74114264..74172269
Genome browser
AA seq
984 aa
AA seq
DB search
MAGEDPYIMGVSDPQMFAMDQFMGMNTIFNNTGYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSFPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSSAGGGGMYGGGGGGAGSGFSYPSYGYSAFGGMHFHPG
TTKSNAGMKHGNGLSNCTAEKDRKRSDKPSDKCNMEHDVKMETTERNECRTSGVNEEKEE
DASSCRGEVNEADCRWHDGPFLEKAMQLAKRHCNALFDYAITGDVKMLLAVQRHLTVVQD
DNGDNVLHLAIIHLHTELVKNLLDVIPDLNYNDIINMRNDLYQTPLHLAVITKQAEMVED
LLKAGADVSLLDRHGNSALHLAAAEGDDKILSLLLKHKKIPSMVDLFNGEGLCAIHMVVM
ANSMSCLKQLIAAGVNVNAQEQKSGRTALHLAVELENIPLAGYLLLETDVDVNSTTYDGT
TPLHIAAGRGSTKLAAVLKAAGADPHIENFEPLFDLEDMKDDDDDEGIVPGTTPLDMASN
CEVYDILNDKPYKPAAAVSKDLLTQGHIRELNESIKMQLCKVLEGRDPSKNWFTLAQKLG
LGILCNAFRLCPSPSRTLLDNYEVSGGTIEELSAALRQMDHTEAIEIIQNAQSISQRQPH
QEDNTIEALLSSSPPTFAKRDTGEVYNSKFQDNESTCDSGVETSFRKLSFTYSDSLNSKS
SITLSKINLGYGHESSVQSNYIAN
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagatccctatattatgggagtgtcagatccccaaatgtttgcaatggac
cagttcatgggaatgaatacaatatttaataatacaggttacatcacttcagacttacca
ctacgaacagcagacggaccttatcttcaaatcattgagcagccaaaacagaggggtttt
cgattccgatacgtatgcgaagggccttcacatggcggacttcctggtgcttccagtgaa
aagaacaaaaaatcattccctcaagtcaaaatttgcaattatgttggacctgcaaaagta
attgtccagttagttactaacgggaaatacgtccacttgcatgctcacagcttggtgggt
aaattttgtgaagatggagtatgcacagttaatgcaggacctaaagatatggttgtaggg
tttgcaaaccttggaatacttcatgtcacaaagaagaaggtgtttgaaactctggaaaca
cgcatgatagatgcttgcaaaaaaggatacaacccaggactcttggtgcatcctgaactt
ggctatctgcaggcagaaggatgtggagacagacagctaactgaacgagaaagagaaatt
attcgtcaggcagcagtacagcagactaaagaaatggatctcagtgtggtgcgtcttatg
tttacagcctttctccccgacagcaatggcagtttcacacggaaacttgatcctgttata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacttaaaaattgtaagaatg
gacagaacagcagggtgcgtaacaggaggggaagagatttaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaggaggatgagaatggtggtatgtgggaa
ggctttggagacttttctcctacagatgtacataggcagtttgctattgtgtttaaaaca
cccaagtatcgagatgtcaatatcacaaagccagcctctgtatttgtacaactgcgtcgg
aaatctgatctggaaacaagtgaaccaaagccttttctttactatccggaaatcaaagat
aaagaagaagtgcaaagaaaacgacagaagctcatgccaaacttctcagatggctacggc
ggaggcagcagtgcaggaggaggtggcatgtatggcgggggaggcggcggtgctggctct
gggttcagttatccttcgtacggttactcagcttttggagggatgcatttccaccctggc
acaacaaagtccaatgctggaatgaaacatggcaatggactgtcaaattgcacagctgaa
aaagataggaagaggtctgataaaccaagtgacaaatgcaacatggagcatgacgtgaaa
atggaaactacggagaggaatgagtgcagaacctctggtgttaatgaggagaaggaggag
gatgcttcatcctgtagaggtgaagtaaatgaagcagattgcaggtggcacgatggtccc
ttcctggagaaggcaatgcagcttgccaagcgccattgcaatgctctctttgattacgct
ataactggagatgtgaagatgctgttggctgttcagcgccatctcaccgttgtccaggat
gataacggagacaatgtccttcatttagcaattatccaccttcatacagaactggttaaa
aacctcttggacgtgatcccagatttgaattataacgacattatcaacatgaggaatgac
ctttatcagacccccttgcacctggcagtaatcacaaagcaggcagagatggtggaagac
ttgctgaaggctggagcagatgtcagccttctggatcgccacggtaattctgccctacat
ttagctgctgctgaaggagacgacaagattttgagtctactcctcaagcataagaagata
ccttcgatggtcgaccttttcaatggtgaaggtctctgtgcaattcacatggtggtgatg
gcaaacagcatgtcctgtctcaaacaactgattgctgctggagttaatgtcaacgctcag
gaacaaaaatctggacgaactgcattgcatttagctgttgaactagagaacatccctttg
gcgggctacctgttgcttgagactgatgtagacgtgaacagcactacatatgatgggaca
acacctcttcacatagcagctggaaggggctctacaaaattggcagcagttctcaaagca
gcaggtgcagatcctcacattgagaactttgagccactgtttgatctagaggatatgaaa
gatgatgatgatgatgaaggaatagtacctgggacaacaccactggatatggcgtccaat
tgtgaggtgtacgacatattaaatgacaagccttacaaaccagcagcagcagtttcgaag
gacttactgacacaaggacatataagagagctgaatgaaagcatcaagatgcagctttgc
aaagtattggaaggacgtgacccaagcaaaaactggtttactctagcacaaaagctgggt
cttggcatactttgtaacgccttcaggttgtgcccttccccatcaagaactctgctagat
aactatgaggtttctggtggtacaattgaagagctgagtgctgctttgagacagatggat
cacacggaagccattgaaatcattcagaacgcacaatccatctcgcaaaggcagcctcac
caggaggacaacaccatagaagctcttctttcatcatctccacccacctttgcaaagagg
gacacaggtgaagtttataatagcaaatttcaagacaatgaaagcacatgcgacagtggt
gtggagacctccttccgcaaactgagctttacttactcagactctctgaacagcaagtca
tcaataacactcagcaaaatcaacctcggctatggacatgaaagctcagtgcaaagcaat
tatatagctaactag
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