Anser cygnoides (swan goose): 106045408
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Entry
106045408 CDS
T04896
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03250
Viral life cycle - HIV-1
acyg04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106045408 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
106045408 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106045408 (SAMHD1)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106045408 (SAMHD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
Pdc1_Ge1
PDEase_I
SAM_2
Motif
Other DBs
NCBI-GeneID:
106045408
NCBI-ProteinID:
XP_066834433
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All DBs
Position
16:15622642..15652862
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AA seq
653 aa
AA seq
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MAGGRAALTSRRRPCPRGARGGGRGAERALRLRGGGGGAMGSPAAGWAEAPAKRARLQGS
AEGPGGAAADGDPRLWDTERLCQHLSRSGVGEPSLLRRFRESGVTGAMLLDLPACALEVT
RVCLPAERLKVLACLNKLRQTVDVMKVFNDPVHGHIEMHPLLVRIIDTPQFQRLRYIKQL
GGTYFVFPGASHNRFEHSLGVGYLAGCLVRALKERQPELDITQRDILCVEIAGLCHDLGH
GPFSHMFDGRFIPLAREGLKWKHETASVEMFEHLITSNRLEEVMKSYGLVLEEDMTFIKE
QIGGPIDENISEKSWPYRGRQKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIQNNFD
YRRLIKFTRVCEVENQKHICARDKEVGNLYDMFHTRNCLHRRAYQHKIGNIIEIMITEAF
QKADRFFEIEGSKGKLYRISTAMEDMEAYTKLTDNIYLEILHSSRPELNEAREILRKIER
RELYKFLGETQPEKVNEIPKDEYDGLADDIANSKPEKNPPNVDLKAEDFVVDVINMDYGM
KDQNPIDNVLFYCKADPSKAVKISKEQVSRLLPRTFAEQVIRVYCKNLDPNIVSAAKQYF
VQWCIKRDFTKPQDGDVIAPHLTPMKESWNNKSGDEFKTASEPSCKQRLSFNK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggccgggggccgcgccgcgctgacgtcacggcggcgtccgtgcccccgcggagcgcgg
ggcggcgggcgcggagcggagcgggcgctgcgcctgcgtggcggcggcggcggcgcgatg
ggcagcccggcggcgggctgggccgaggcccccgccaagcgcgcgcggctccagggctcg
gccgaggggcccgggggcgccgccgccgacggcgacccgcggctgtgggacacggagcgg
ctctgccagcacctctcgcgcagcggcgtgggcgagcccagcctgctgcgccgcttccga
gagagcggcgtcaccggggccatgctgctggacctgcccgcctgcgccctggaggtcacg
cgcgtctgcctcccagctgagagattgaaggtgcttgcctgcctgaacaaactgagacag
acagtggacgtaatgaaggtttttaacgatccagttcacgggcatattgaaatgcaccct
cttcttgttcgcatcattgacacacctcagtttcagcgcctgcgatacattaagcagctg
ggtggcacttactttgtttttccaggagcctctcacaaccgctttgaacactctttaggg
gtggggtacctagcaggatgcctggttcgtgcactgaaggagagacaaccagaactggat
ataacccaacgagacatcctctgtgtagaaattgcgggtctttgtcatgatttgggtcac
ggaccgttttcacacatgtttgatggaagatttattccactcgctcgtgaaggtttgaag
tggaagcacgaaactgcttctgttgaaatgtttgagcacttaatcacatccaatagacta
gaagaagtcatgaagtcatatggtcttgtcctggaagaagatatgaccttcatcaaggaa
caaataggagggcctatagatgaaaacatttctgagaaatcgtggccctaccgtggtcga
caaaaggagaagagtttcctgtatgagatagtagctaacaaaaaaaatggcattgatgtt
gacaaatgggattattttgcaagggattgccatcacctaggaatccagaataattttgat
tataggcggttaattaaattcactcgcgtctgtgaagtagaaaaccagaagcatatctgt
gcccgtgacaaggaagttggaaatttgtatgatatgttccacacacggaattgcctgcat
cgacgagcataccagcataagattggcaacatcattgaaataatgattacagaagccttt
caaaaagcagaccgtttttttgaaatagaaggctctaaaggaaaattgtaccggatttct
acagcaatggaagacatggaagcctacactaagctaactgataatatctacttggaaatt
ctgcactcaagtcgtccagaactgaacgaggcacgagaaattttgcgtaaaatagaacgg
cgtgaattatacaagtttctaggagagactcaacctgaaaaagtgaatgaaattccaaag
gatgaatatgatggtctggcagatgacatcgctaattccaagccagaaaagaatcctcca
aacgtggatctaaaggctgaagactttgtcgttgatgttatcaatatggattatggaatg
aaagatcagaatcccattgataatgttctcttctattgcaaggctgatccttccaaggct
gtcaagatcagtaaagaacaggtttcaaggcttttacccaggacatttgcagaacaggtt
attcgggtttattgcaaaaatctggatccaaatattgtttcagctgcaaaacagtatttc
gttcagtggtgtataaagagggatttcaccaaaccacaggatggtgatgtgattgcccct
catctaactccaatgaaagaaagctggaataacaaaagtggggatgaattcaagacagct
tcagaaccgagttgcaagcaaaggctttctttcaataagtaa
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