Anser cygnoides (swan goose): 106045521
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Entry
106045521 CDS
T04896
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03030
DNA replication
acyg03410
Base excision repair
acyg03420
Nucleotide excision repair
acyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106045521 (RFC5)
03410 Base excision repair
106045521 (RFC5)
03420 Nucleotide excision repair
106045521 (RFC5)
03430 Mismatch repair
106045521 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyg03032
]
106045521 (RFC5)
03036 Chromosome and associated proteins [BR:
acyg03036
]
106045521 (RFC5)
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106045521 (RFC5)
DNA replication proteins [BR:
acyg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106045521 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
106045521 (RFC5)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106045521 (RFC5)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106045521 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
106045521 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_22
AAA_24
AAA_11
AAA_assoc_2
AAA_14
DEAD
RuvB_N
DUF815
ResIII
AAA_5
AAA_30
AAA_19
DNAX_ATPase_lid
PhoH
AAA_7
TIP49
TniB
ATPase_2
nSTAND3
Mg_chelatase
Thioredoxin_6
AAA_25
Gp44_lid
bpMoxR
AAA_3
NPHP3_N
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
106045521
NCBI-ProteinID:
XP_066834924
LinkDB
All DBs
Position
17:13727498..13730407
Genome browser
AA seq
329 aa
AA seq
DB search
MAAAGGRNLPWVEKYRPRELSELVSHRDILSTIQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFSSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVVQ
EEGVDVSEDGMKALVTLSSGDMRRALNILQSTAMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKITELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYR
LAAGTSEKVQLSSLVAAFQVTRDLIVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggcgggaggaacctgccctgggtggagaagtaccggccgcgggagctc
tccgagctggtgtcgcaccgggacatcctcagcaccatccagcggttcatcagcgaggac
cggctgccccacctcctcctctatggcccccccggcaccggcaagacctccaccatcctg
gcctgcgcgcgacagctctaccgggagcgggagttcagctccatggtgttggagctgaac
gcctcggacgaccggggaatcgacatcgtcagagggcccatcctgagcttcgccagcacc
aggaccatcttcaagaaaggcttcaagctcgtcatcctggatgaagccgacgccatgacc
caggacgctcagaacgccctgaggcgagtgatcgagaagttcaccgaaaacacccgcttc
tgcctcatctgcaactacctctccaagatcatccccgcgctgcagtcccgctgcacccgc
ttccgcttcgggcccctcaccccagagctgatggtgccccggctgcagcacgtcgtacag
gaggagggggtggatgtgagcgaggacgggatgaaggcgctggtgaccctgtcgagcggc
gacatgcgccgagccctgaacatcctgcagagcaccgccatggccttcgggaaggtgacg
gaggagaacgtctacacctgcacggggcatcccctcaagtccgacatcgccaacatcctc
gactggatgctcaaccaggacttctccaccgcctatcgcaaaatcacagagctgaagacg
ctgaagggcttggccctgcaggacatcctgaccgagatccacctgtttgtgcacagagtc
gatttcccaccctcggtccgcatccagctgctgatcaaaatggcagacatcgagtaccgg
ctggctgctggcacgagcgagaaggttcagctgagctccctcgtcgcggctttccaagtc
accagggacctgatcgtggccgaagcctga
DBGET
integrated database retrieval system
